Mark Bathe

11 papers Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
Characterizing DNA Origami Nanostructures in TEM Images Using Convolutional Neural Networks.
J. Chem. Inf. Model.
Xingfei Wei, Qiankun Mo, Chi Chen, Mark Bathe, Rigoberto Hernandez
2025 J jnl
DNA Origami Nanostructures Observed in Transmission Electron Microscopy Images can be Characterized through Convolutional Neural Networks.
CoRR
Xingfei Wei, Qiankun Mo, Chi Chen, Mark Bathe, Rigoberto Hernandez
2023 J jnl
Factorization and pseudofactorization of weighted graphs.
Discret. Appl. Math.
Kristin Sheridan, Joseph Berleant, Mark Bathe, Anne Condon, Virginia Vassilevska Williams
2023 J jnl
Isometric Hamming embeddings of weighted graphs.
Discret. Appl. Math.
Joseph Berleant, Kristin Sheridan, Anne Condon, Virginia Vassilevska Williams, Mark Bathe
2021 J jnl
Factorization and pseudofactorization of weighted graphs.
CoRR
Kristin Sheridan, Joseph Berleant, Mark Bathe, Anne Condon, Virginia Vassilevska Williams
2021 J jnl
Isometric Hamming embeddings of weighted graphs.
CoRR
Joseph Berleant, Kristin Sheridan, Anne Condon, Virginia Vassilevska Williams, Mark Bathe
2019 J jnl
A Bayesian framework for high-throughput T cell receptor pairing.
Bioinform.
Patrick V. Holec, Joseph Berleant, Mark Bathe, Michael E. Birnbaum
2019 J jnl
DoGNet: A deep architecture for synapse detection in multiplexed fluorescence images.
PLoS Comput. Biol.
Victor Kulikov, Syuan-Ming Guo, Matthew Stone, Allen Goodman, Anne E. Carpenter, Mark Bathe, Victor S. Lempitsky
2011 J jnl
Conformational dynamics data bank: a database for conformational dynamics of proteins and supramolecular protein assemblies.
Nucleic Acids Res.
Do-Nyun Kim, Josiah Altschuler, Campbell Strong, Gaël McGill, Mark Bathe
2010 J jnl
The subspace iteration method in protein normal mode analysis.
J. Comput. Chem.
Reza Sharifi Sedeh, Mark Bathe, Klaus-Jürgen Bathe
2003 J jnl
Inverse Monte Carlo procedure for conformation determination of macromolecules.
J. Comput. Chem.
Mark Bathe, Gregory C. Rutledge