Mark A. Knepper

12 papers B 1Journal 7Unranked 4
YearRankTypeTitle / Venue / Authors
2019 J jnl
PTM-Logo: a program for generation of sequence logos based on position-specific background amino-acid probabilities.
Bioinform.
Thammakorn Saethang, Kenneth Hodge, Chin-Rang Yang, Yue Zhao, Ingorn Kimkong, Mark A. Knepper, Trairak Pisitkun
2018 J jnl
AbDesigner3D: a structure-guided tool for peptide-based antibody production.
Bioinform.
Thammakorn Saethang, Kenneth Hodge, Ingorn Kimkong, D. Michael Payne, Mark A. Knepper, Trairak Pisitkun
2014 J jnl
CAMS-RS: Clustering Algorithm for Large-Scale Mass Spectrometry Data Using Restricted Search Space and Intelligent Random Sampling.
IEEE ACM Trans. Comput. Biol. Bioinform.
Fahad Saeed, Jason D. Hoffert, Mark A. Knepper
2014 J jnl
Exploiting thread-level and instruction-level parallelism to cluster mass spectrometry data using multicore architectures.
Netw. Model. Anal. Health Informatics Bioinform.
Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper
2013 B conf
A high performance algorithm for clustering of large-scale protein mass spectrometry data using multi-core architectures.
ASONAM
Fahad Saeed, Jason D. Hoffert, Mark A. Knepper
2013 J jnl
An Efficient Algorithm for Clustering of Large-Scale Mass Spectrometry Data
CoRR
Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert
2012 — conf
An efficient algorithm for clustering of large-scale mass spectrometry data.
BIBM
Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert
2012 — conf
An efficient dynamic programming algorithm for phosphorylation site assignment of large-scale mass spectrometry data.
BIBM Workshops
Fahad Saeed, Trairak Pisitkun, Jason D. Hoffert, Guanghui Wang, Marjan Gucek, Mark A. Knepper
2012 — conf
High performance phosphorylation site assignment algorithm for mass spectrometry data using multicore systems.
BCB
Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper
2011 J jnl
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data
CoRR
Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert
2011 — conf
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data.
BICoB
Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert
1995 J jnl
A Dynamic Numerical Method for Models of the Urine Concentrating Mechanism.
SIAM J. Appl. Math.
Harold E. Layton, E. Bruce Pitman, Mark A. Knepper