Marius Staring

130 papers B 16Journal 74Unranked 39

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	CRUNet-MR-Univ: A Foundation Model for Diverse Cardiac MRI Reconstruction. CoRR Donghang Lyu, Marius Staring, Hildo J. Lamb, Mariya Doneva
2026	J	`jnl`	Clinical DVH metrics as a loss function for 3D dose prediction in head and neck radiotherapy. CoRR Ruochen Gao, Marius Staring, Frank J. W. M. Dankers
2026	J	`jnl`	Efficient Large-Deformation Medical Image Registration via Recurrent Dynamic Correlation. IEEE Trans. Medical Imaging Tianran Li, Marius Staring, Yuchuan Qiao
2026	J	`jnl`	LoGCC: Local-to-Global Correlation Clustering for Scalar Field Ensembles. IEEE Trans. Vis. Comput. Graph. Nicolas F. Chaves-de-Plaza, Renata G. Raidou, Prerak Mody, Marius Staring, René van Egmond, Anna Vilanova, Klaus Hildebrandt
2025	J	`jnl`	A deep learning model to reduce agent dose for contrast-enhanced MRI of the cerebellopontine angle cistern. CoRR Yunjie Chen, Rianne A. Weber, Olaf M. Neve, Stephan R. Romeijn, Erik F. Hensen, Jelmer M. Wolterink, Qian Tao, Marius Staring, Berit M. Verbist
2025	J	`jnl`	Bridging gaps with computer vision: AI in (bio)medical imaging and astronomy. Astron. Comput. Samira Rezaei, Amirmohammad Chegeni, Amir Javadpour, Alireza Vafaei Sadr, Lu Cao, Huub J. A. Rottgering, Marius Staring
2025	J	`jnl`	CMRINet: Joint Groupwise Registration and Segmentation for Cardiac Function Quantification from Cine-MRI. CoRR Mohamed S. Elmahdy, Marius Staring, Patrick J. H. de Koning, Samer Alabed, Mahan Salehi, Faisal Alandejani, Michael J. Sharkey, Ziad Aldabbagh, Andrew J. Swift, Rob J. van der Geest
2025	J	`jnl`	Efficient Large-Deformation Medical Image Registration via Recurrent Dynamic Correlation. CoRR Tianran Li, Marius Staring, Yuchuan Qiao
2025	J	`jnl`	Implementation of delineation error detection systems in time-critical radiotherapy: Do AI-supported optimization and human preferences meet? Cogn. Technol. Work. Nicolas F. Chaves-de-Plaza, Prerak Mody, Klaus Hildebrandt, Marius Staring, Eleftheria Astreinidou, Mischa de Ridder, Huib de Ridder, Anna Vilanova, René van Egmond
2025	J	`jnl`	KP-INR: A Dual-Branch Implicit Neural Representation Model for Cardiac Cine MRI Reconstruction. CoRR Donghang Lyu, Marius Staring, Mariya Doneva, Hildo J. Lamb, Nicola Pezzotti
2025	—	`conf`	SHMoAReg: Spark Deformable Image Registration via Spatial Heterogeneous Mixture of Experts and Attention Heads. BIBM Yuxi Zheng, Jianhui Feng, Tianran Li, Marius Staring, Yuchuan Qiao
2025	J	`jnl`	SHMoAReg: Spark Deformable Image Registration via Spatial Heterogeneous Mixture of Experts and Attention Heads. CoRR Yuxi Zheng, Jianhui Feng, Tianran Li, Marius Staring, Yuchuan Qiao
2025	J	`jnl`	UPCMR: A Universal Prompt-guided Model for Random Sampling Cardiac MRI Reconstruction. CoRR Donghang Lyu, Chinmay Rao, Marius Staring, Matthias J. P. van Osch, Mariya Doneva, Hildo J. Lamb, Nicola Pezzotti
2024	J	`jnl`	A Plug-and-Play Method for Guided Multi-contrast MRI Reconstruction based on Content/Style Modeling. CoRR Chinmay Rao, Matthias van Osch, Nicola Pezzotti, Jeroen de Bresser, Laurens Beljaards, Jakob Meineke, Elwin de Weerdt, Huangling Lu, Mariya Doneva, Marius Staring
2024	J	`jnl`	Depth for Multi-Modal Contour Ensembles. Comput. Graph. Forum Nicolas F. Chaves-de-Plaza, Mathijs Molenaar, Prerak Mody, Marius Staring, René van Egmond, Elmar Eisemann, Anna Vilanova, Klaus Hildebrandt
2024	J	`jnl`	Efficient MedSAMs: Segment Anything in Medical Images on Laptop. CoRR Jun Ma, Feifei Li, Sumin Kim, Reza Asakereh, Bao-Hiep Le, Dang-Khoa Nguyen-Vu, Alexander Pfefferle, Muxin Wei, Ruochen Gao, Donghang Lyu, Songxiao Yang, Lennart Purucker, Zdravko Marinov, Marius Staring, Haisheng Lu, Thuy Thanh Dao, Xincheng Ye, Zhi Li, Gianluca Brugnara, Philipp Vollmuth, Martha Foltyn-Dumitru, Jaeyoung Cho, Mustafa A. Mahmutoglu, Martin Bendszus, Irada Pflüger, Aditya Rastogi, Dong Ni, Xin Yang, Guang-Quan Zhou, Kaini Wang, Nicholas Heller, Nikolaos Papanikolopoulos, Christopher J. Weight, Yubing Tong, Jayaram K. Udupa, Patrick J. Cahill, Yaqi Wang, Yifan Zhang, Francisco Contijoch, Elliot R. McVeigh, Xin Ye, Shucheng He, Robert Haase, Thomas Pinetz, Alexander Radbruch, Inga Krause, Erich Kobler, Jian He, Yucheng Tang, Haichun Yang, Yuankai Huo, Gongning Luo, Kaisar Kushibar, Jandos Amankulov, Dias Toleshbayev, Amangeldi Mukhamejan, Jan Egger, Antonio Pepe, Christina Gsaxner, Gijs Luijten, Shohei Fujita, Tomohiro Kikuchi, Benedikt Wiestler, Jan S. Kirschke, Ezequiel de la Rosa, Federico Bolelli, Luca Lumetti, Costantino Grana, Kunpeng Xie, Guomin Wu, Behrus Puladi, Carlos Martín-Isla, Karim Lekadir, Víctor M. Campello, Wei Shao, Wayne Brisbane, Hongxu Jiang, Hao Wei, Wu Yuan, Shuangle Li, Yuyin Zhou, Bo Wang
2024	J	`jnl`	Improving Uncertainty-Error Correspondence in Deep Bayesian Medical Image Segmentation. CoRR Prerak Mody, Nicolas F. Chaves-de-Plaza, Chinmay Rao, Eleftheria Astrenidou, Mischa de Ridder, Nienke Hoekstra, Klaus Hildebrandt, Marius Staring
2024	J	`jnl`	Inclusion Depth for Contour Ensembles. IEEE Trans. Vis. Comput. Graph. Nicolas F. Chaves-de-Plaza, Prerak Mody, Marius Staring, René van Egmond, Anna Vilanova, Klaus Hildebrandt
2024	J	`jnl`	MCP-MedSAM: A Powerful Lightweight Medical Segment Anything Model Trained with a Single GPU in Just One Day. CoRR Donghang Lyu, Ruochen Gao, Marius Staring
2024	J	`jnl`	Seg-metrics: a Python package to compute segmentation metrics. CoRR Jingnan Jia, Marius Staring, Berend C. Stoel
2024	—	`conf`	Swin-LiteMedSAM: A Lightweight Box-Based Segment Anything Model for Large-Scale Medical Image Datasets. MedSAM@CVPR Ruochen Gao, Donghang Lyu, Marius Staring
2024	J	`jnl`	Swin-LiteMedSAM: A Lightweight Box-Based Segment Anything Model for Large-Scale Medical Image Datasets. CoRR Ruochen Gao, Donghang Lyu, Marius Staring
2024	—	`conf`	UPCMR: A Universal Prompt-Guided Model for Random Sampling Cardiac MRI Reconstruction. CMRxRecon/MBAS/STACOM@MICCAI Donghang Lyu, Chinmay Rao, Marius Staring, Matthias J. P. van Osch, Mariya Doneva, Hildo J. Lamb, Nicola Pezzotti
2024	J	`jnl`	Using 3D point cloud and graph-based neural networks to improve the estimation of pulmonary function tests from chest CT. Comput. Biol. Medicine Jingnan Jia, Bo Yu, Prerak Mody, Maarten K. Ninaber, Anne A. Schouffoer, Jeska K. De Vries-Bouwstra, Lucia J. M. Kroft, Marius Staring, Berend C. Stoel
2024	—	`conf`	Vestibular Schwannoma Growth Prediction from Longitudinal MRI by Time-Conditioned Neural Fields. MICCAI (3) Yunjie Chen, Jelmer M. Wolterink, Olaf M. Neve, Stephan R. Romeijn, Berit M. Verbist, Erik F. Hensen, Qian Tao, Marius Staring
2024	J	`jnl`	Vestibular schwannoma growth prediction from longitudinal MRI by time conditioned neural fields. CoRR Yunjie Chen, Jelmer M. Wolterink, Olaf M. Neve, Stephan R. Romeijn, Berit M. Verbist, Erik F. Hensen, Qian Tao, Marius Staring
2023	B	`conf`	Analyzing components of a transformer under different dataset scales in 3D prostate CT segmentation. Image Processing Yicong Tan, Prerak Mody, Viktor van der Valk, Marius Staring, Jan van Gemert
2023	J	`jnl`	Automatic Pulmonary Function Estimation From Chest CT Scans Using Deep Regression Neural Networks: The Relation Between Structure and Function in Systemic Sclerosis. IEEE Access Jingnan Jia, Emiel R. Marges, Jeska K. De Vries-Bouwstra, Maarten K. Ninaber, Lucia J. M. Kroft, Anne A. Schouffoer, Marius Staring, Berend C. Stoel
2023	J	`jnl`	CoNeS: Conditional neural fields with shift modulation for multi-sequence MRI translation. CoRR Yunjie Chen, Marius Staring, Olaf M. Neve, Stephan R. Romeijn, Erik F. Hensen, Berit M. Verbist, Jelmer M. Wolterink, Qian Tao
2023	—	`conf`	Joint Optimization of a β-VAE for ECG Task-Specific Feature Extraction. MICCAI (2) Viktor van der Valk, Douwe Atsma, Roderick Scherptong, Marius Staring
2023	J	`jnl`	Joint optimization of a β-VAE for ECG task-specific feature extraction. CoRR Viktor van der Valk, Douwe Atsma, Roderick Scherptong, Marius Staring
2023	—	`conf`	Local Implicit Neural Representations for Multi-Sequence MRI Translation. ISBI Yunjie Chen, Marius Staring, Jelmer M. Wolterink, Qian Tao
2023	—	`conf`	itk-elastix: Medical image registration in Python. SciPy Konstantinos Ntatsis, Niels Dekker, Viktor van der Valk, Tom Birdsong, Dzenan Zukic, Stefan Klein, Marius Staring, Matthew McCormick
2022	B	`conf`	Comparing Bayesian models for organ contouring in head and neck radiotherapy. Image Processing Prerak Mody, Nicolas F. Chaves-de-Plaza, Klaus Hildebrandt, René van Egmond, Huib de Ridder, Marius Staring
2022	—	`conf`	Improving Error Detection in Deep Learning Based Radiotherapy Autocontouring Using Bayesian Uncertainty. UNSURE@MICCAI Prerak Mody, Nicolas F. Chaves-de-Plaza, Klaus Hildebrandt, Marius Staring
2022	—	`conf`	Prediction of lung CT scores of systemic sclerosis by cascaded regression neural networks. Computer-Aided Diagnosis Jingnan Jia, Marius Staring, Irene Hernández-Girón, Lucia J. M. Kroft, Anne A. Schouffoer, Berend C. Stoel
2022	J	`jnl`	Towards Fast AI-Infused Human-Centered Contouring Workflows for Adaptive Proton Therapy in the Head and Neck. CoRR Nicolas F. Chaves-de-Plaza, Prerak Mody, Klaus Hildebrandt, Marius Staring, Huib de Ridder, René van Egmond
2022	—	`conf`	Transformation-consistent semi-supervised learning for prostate CT radiotherapy. Computer-Aided Diagnosis Yichao Li, Mohamed S. Elmahdy, Michael S. Lew, Marius Staring
2021	J	`jnl`	ASL to PET Translation by a Semi-supervised Residual-based Attention-guided Convolutional Neural Network. CoRR Sahar Yousefi, Hessam Sokooti, Wouter M. Teeuwisse, Dennis F. R. Heijtel, Aart J. Nederveen, Marius Staring, Matthias J. P. van Osch
2021	J	`jnl`	Comparing Bayesian Models for Organ Contouring in Headand Neck Radiotherapy. CoRR Prerak Mody, Nicolas F. Chaves-de-Plaza, Klaus Hildebrandt, René van Egmond, Huib de Ridder, Marius Staring
2021	J	`jnl`	Esophageal Tumor Segmentation in CT Images Using a Dilated Dense Attention Unet (DDAUnet). IEEE Access Sahar Yousefi, Hessam Sokooti, Mohamed S. Elmahdy, Irene M. Lips, Mohammad T. Manzuri Shalmani, Roel T. Zinkstok, Frank J. W. M. Dankers, Marius Staring
2021	—	`conf`	Evaluation of the Robustness of Learned MR Image Reconstruction to Systematic Deviations Between Training and Test Data for the Models from the fastMRI Challenge. MLMIR@MICCAI Patricia M. Johnson, Geunu Jeong, Kerstin Hammernik, Jo Schlemper, Chen Qin, Jinming Duan, Daniel Rueckert, Jingu Lee, Nicola Pezzotti, Elwin de Weerdt, Sahar Yousefi, Mohamed S. Elmahdy, Jeroen Hendrikus Franciscus Van Gemert, Christophe Schülke, Mariya Doneva, Tim Nielsen, Sergey Kastryulin, Boudewijn P. F. Lelieveldt, Matthias J. P. van Osch, Marius Staring, Eric Z. Chen, Puyang Wang, Xiao Chen, Terrence Chen, Vishal M. Patel, Shanhui Sun, Hyungseob Shin, Yohan Jun, Taejoon Eo, Sewon Kim, Taeseong Kim, Dosik Hwang, Patrick Putzky, Dimitrios Karkalousos, Jonas Teuwen, Nikita Miriakov, Bart Bakker, Matthan W. A. Caan, Max Welling, Matthew J. Muckley, Florian Knoll
2021	J	`jnl`	Hierarchical Prediction of Registration Misalignment Using a Convolutional LSTM: Application to Chest CT Scans. IEEE Access Hessam Sokooti, Sahar Yousefi, Mohamed S. Elmahdy, Boudewijn P. F. Lelieveldt, Marius Staring
2021	J	`jnl`	Joint Registration and Segmentation via Multi-Task Learning for Adaptive Radiotherapy of Prostate Cancer. IEEE Access Mohamed S. Elmahdy, Laurens Beljaards, Sahar Yousefi, Hessam Sokooti, Fons J. Verbeek, Uulke A. van der Heide, Marius Staring
2021	J	`jnl`	Joint Registration and Segmentation via Multi-Task Learning for Adaptive Radiotherapy of Prostate Cancer. CoRR Mohamed S. Elmahdy, Laurens Beljaards, Sahar Yousefi, Hessam Sokooti, Fons J. Verbeek, Uulke A. van der Heide, Marius Staring
2021	—	`conf`	Multi-Task Semi-Supervised Learning For Pulmonary Lobe Segmentation. ISBI Jingnan Jia, Zhiwei Zhai, M. Els Bakker, Irene Hernández-Girón, Marius Staring, Berend C. Stoel
2021	J	`jnl`	Multi-task Semi-supervised Learning for Pulmonary Lobe Segmentation. CoRR Jingnan Jia, Zhiwei Zhai, M. Els Bakker, Irene Hernández-Girón, Marius Staring, Berend C. Stoel
2021	J	`jnl`	Prediction of Lung CT Scores of Systemic Sclerosis by Cascaded Regression Neural Networks. CoRR Jingnan Jia, Marius Staring, Irene Hernández-Girón, Lucia J. M. Kroft, Anne A. Schouffoer, Berend C. Stoel
2020	—	`conf`	A Cross-Stitch Architecture for Joint Registration and Segmentation in Adaptive Radiotherapy. MIDL Laurens Beljaards, Mohamed S. Elmahdy, Fons J. Verbeek, Marius Staring
2020	J	`jnl`	A Cross-Stitch Architecture for Joint Registration and Segmentation in Adaptive Radiotherapy. CoRR Laurens Beljaards, Mohamed S. Elmahdy, Fons J. Verbeek, Marius Staring
2020	J	`jnl`	A framework for pulmonary fissure segmentation in 3D CT images using a directional derivative of plate filter. Signal Process. Hong Zhao, Berend C. Stoel, Marius Staring, M. Els Bakker, Jan Stolk, Ping Zhou, Changyan Xiao
2020	J	`jnl`	An Adaptive Intelligence Algorithm for Undersampled Knee MRI Reconstruction. IEEE Access Nicola Pezzotti, Sahar Yousefi, Mohamed S. Elmahdy, Jeroen Hendrikus Fransiscus Van Gemert, Christophe Schülke, Mariya Doneva, Tim Nielsen, Sergey Kastryulin, Boudewijn P. F. Lelieveldt, Matthias J. P. van Osch, Elwin de Weerdt, Marius Staring
2020	J	`jnl`	An Adaptive Intelligence Algorithm for Undersampled Knee MRI Reconstruction: Application to the 2019 fastMRI Challenge. CoRR Nicola Pezzotti, Sahar Yousefi, Mohamed S. Elmahdy, Jeroen Hendrikus Fransiscus Van Gemert, Christophe Schülke, Mariya Doneva, Tim Nielsen, Sergey Kastryulin, Boudewijn P. F. Lelieveldt, Matthias J. P. van Osch, Elwin de Weerdt, Marius Staring
2020	J	`jnl`	Esophageal Tumor Segmentation in CT Images using a 3D Convolutional Neural Network. CoRR Sahar Yousefi, Hessam Sokooti, Mohamed S. Elmahdy, Irene M. Lips, Mohammad T. Manzuri Shalmani, Roel T. Zinkstok, Frank J. W. M. Dankers, Marius Staring
2020	B	`conf`	Mutual information for unsupervised deep learning image registration. Image Processing Bob D. de Vos, Bas H. M. van der Velden, Jörg Sander, Kenneth G. A. Gilhuijs, Marius Staring, Ivana Isgum
2020	—	`conf`	Patient-Specific Finetuning of Deep Learning Models for Adaptive Radiotherapy in Prostate CT. ISBI Mohamed S. Elmahdy, Tanuj Ahuja, Uulke A. van der Heide, Marius Staring
2020	J	`jnl`	Patient-Specific Finetuning of Deep Learning Models for Adaptive Radiotherapy in Prostate CT. CoRR Mohamed S. Elmahdy, Tanuj Ahuja, Uulke A. van der Heide, Marius Staring
2019	J	`jnl`	3D Convolutional Neural Networks Image Registration Based on Efficient Supervised Learning from Artificial Deformations. CoRR Hessam Sokooti, Bob D. de Vos, Floris F. Berendsen, Mohsen Ghafoorian, Sahar Yousefi, Boudewijn P. F. Lelieveldt, Ivana Isgum, Marius Staring
2019	J	`jnl`	A Novel Motion Detection Method Using 3D Discrete Wavelet Transform. IEEE Trans. Circuits Syst. Video Technol. Sahar Yousefi, M. T. Manzuri-Shalmani, Jeremy Lin, Marius Staring
2019	J	`jnl`	A deep learning framework for unsupervised affine and deformable image registration. Medical Image Anal. Bob D. de Vos, Floris F. Berendsen, Max A. Viergever, Hessam Sokooti, Marius Staring, Ivana Isgum
2019	—	`conf`	Adversarial Optimization for Joint Registration and Segmentation in Prostate CT Radiotherapy. MICCAI (6) Mohamed S. Elmahdy, Jelmer M. Wolterink, Hessam Sokooti, Ivana Isgum, Marius Staring
2019	J	`jnl`	Adversarial optimization for joint registration and segmentation in prostate CT radiotherapy. CoRR Mohamed S. Elmahdy, Jelmer M. Wolterink, Hessam Sokooti, Ivana Isgum, Marius Staring
2019	J	`jnl`	An Efficient Preconditioner for Stochastic Gradient Descent Optimization of Image Registration. IEEE Trans. Medical Imaging Yuchuan Qiao, Boudewijn P. F. Lelieveldt, Marius Staring
2019	—	`conf`	Fast Dynamic Perfusion and Angiography Reconstruction Using an End-to-End 3D Convolutional Neural Network. MLMIR@MICCAI Sahar Yousefi, Lydiane Hirschler, Merlijn van der Plas, Mohamed S. Elmahdy, Hessam Sokooti, Matthias van Osch, Marius Staring
2019	J	`jnl`	Fast Dynamic Perfusion and Angiography Reconstruction using an end-to-end 3D Convolutional Neural Network. CoRR Sahar Yousefi, Lydiane Hirschler, Merlijn van der Plas, Mohamed S. Elmahdy, Hessam Sokooti, Matthias van Osch, Marius Staring
2019	—	`conf`	Linking Convolutional Neural Networks with Graph Convolutional Networks: Application in Pulmonary Artery-Vein Separation. GLMI@MICCAI Zhiwei Zhai, Marius Staring, Xuhui Zhou, Qiuxia Xie, Xiaojuan Xiao, M. Els Bakker, Lucia J. M. Kroft, Boudewijn P. F. Lelieveldt, Gudula J. A. M. Boon, Frederikus A. Klok, Berend C. Stoel
2019	J	`jnl`	Quantitative Error Prediction of Medical Image Registration using Regression Forests. CoRR Hessam Sokooti, Gorkem Saygili, Ben Glocker, Boudewijn P. F. Lelieveldt, Marius Staring
2019	J	`jnl`	Quantitative error prediction of medical image registration using regression forests. Medical Image Anal. Hessam Sokooti, Gorkem Saygili, Ben Glocker, Boudewijn P. F. Lelieveldt, Marius Staring
2019	J	`jnl`	Registration of vascular structures using a hybrid mixture model. Int. J. Comput. Assist. Radiol. Surg. Siming Bayer, Zhiwei Zhai, Maddalena Strumia, Xiaoguang Tong, Ying Gao, Marius Staring, Berend C. Stoel, Rebecca Fahrig, Arya Nabavi, Andreas Maier, Nishant Ravikumar
2019	—	`conf`	The Continuous Registration Challenge: Evaluation-as-a-Service for Medical Image Registration Algorithms. ISBI Kasper Marstal, Floris F. Berendsen, Niels Dekker, Marius Staring, Stefan Klein
2018	J	`jnl`	A Deep Learning Framework for Unsupervised Affine and Deformable Image Registration. CoRR Bob D. de Vos, Floris F. Berendsen, Max A. Viergever, Hessam Sokooti, Marius Staring, Ivana Isgum
2018	—	`ed.`	Biomedical Image Registration - 8th International Workshop, WBIR 2018, Leiden, The Netherlands, June 28-29, 2018, Proceedings WBIR Stefan Klein, Marius Staring, Stanley Durrleman, Stefan Sommer
2018	—	`conf`	Esophageal Gross Tumor Volume Segmentation Using a 3D Convolutional Neural Network. MICCAI (4) Sahar Yousefi, Hessam Sokooti, Mohamed S. Elmahdy, Femke P. Peters, Mohammad T. Manzuri Shalmani, Roel T. Zinkstok, Marius Staring
2018	—	`conf`	Evaluation of Multi-metric Registration for Online Adaptive Proton Therapy of Prostate Cancer. WBIR Mohamed S. Elmahdy, Thyrza Jagt, Sahar Yousefi, Hessam Sokooti, Roel Zinkstok, Mischa Hoogeman, Marius Staring
2018	B	`conf`	GPU-based stochastic-gradient optimization for non-rigid medical image registration in time-critical applications. Image Processing Parag Bhosale, Marius Staring, Zaid Al-Ars, Floris F. Berendsen
2018	J	`jnl`	Integrating spatial-anatomical regularization and structure sparsity into SVM: Improving interpretation of Alzheimer's disease classification. NeuroImage Zhuo Sun, Yuchuan Qiao, Boudewijn P. F. Lelieveldt, Marius Staring, Alzheimer's Disease Neuroimaging Initiative
2018	—	`conf`	Pulmonary Vessel Tree Matching for Quantifying Changes in Vascular Morphology. MICCAI (2) Zhiwei Zhai, Marius Staring, Hideki Ota, Berend C. Stoel
2017	J	`jnl`	Detection of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using Longitudinal Brain MRI. Frontiers Neuroinformatics Zhuo Sun, Martijn van de Giessen, Boudewijn P. F. Lelieveldt, Marius Staring
2017	—	`conf`	End-to-End Unsupervised Deformable Image Registration with a Convolutional Neural Network. DLMIA/ML-CDS@MICCAI Bob D. de Vos, Floris F. Berendsen, Max A. Viergever, Marius Staring, Ivana Isgum
2017	J	`jnl`	End-to-End Unsupervised Deformable Image Registration with a Convolutional Neural Network. CoRR Bob D. de Vos, Floris F. Berendsen, Max A. Viergever, Marius Staring, Ivana Isgum
2017	J	`jnl`	Fully-automatic left ventricular segmentation from long-axis cardiac cine MR scans. Medical Image Anal. Rahil Shahzad, Qian Tao, Oleh Dzyubachyk, Marius Staring, Boudewijn P. F. Lelieveldt, Rob J. van der Geest
2017	—	`conf`	Nonrigid Image Registration Using Multi-scale 3D Convolutional Neural Networks. MICCAI (1) Hessam Sokooti, Bob D. de Vos, Floris F. Berendsen, Boudewijn P. F. Lelieveldt, Ivana Isgum, Marius Staring
2016	J	`jnl`	A survey of medical image registration - under review. Medical Image Anal. Max A. Viergever, J. B. Antoine Maintz, Stefan Klein, Keelin Murphy, Marius Staring, Josien P. W. Pluim
2016	—	`conf`	Accuracy Estimation for Medical Image Registration Using Regression Forests. MICCAI (3) Hessam Sokooti, Gorkem Saygili, Ben Glocker, Boudewijn P. F. Lelieveldt, Marius Staring
2016	J	`jnl`	Confidence Estimation for Medical Image Registration Based On Stereo Confidences. IEEE Trans. Medical Imaging Gorkem Saygili, Marius Staring, Emile A. Hendriks
2016	J	`jnl`	Fast Automatic Step Size Estimation for Gradient Descent Optimization of Image Registration. IEEE Trans. Medical Imaging Yuchuan Qiao, Baldur van Lew, Boudewijn P. F. Lelieveldt, Marius Staring
2016	B	`conf`	Lung vessel segmentation in CT images using graph cuts. Image Processing Zhiwei Zhai, Marius Staring, Berend C. Stoel
2016	J	`jnl`	Morphological maturation of the mouse brain: An in vivo MRI and histology investigation. NeuroImage Luam Hammelrath, Sinisa Skokic, Artem Khmelinskii, Andreas Hess, Noortje van der Knaap, Marius Staring, Boudewijn P. F. Lelieveldt, Dirk Wiedermann, Mathias Hoehn
2016	J	`jnl`	Pulmonary Fissure Detection in CT Images Using a Derivative of Stick Filter. IEEE Trans. Medical Imaging Changyan Xiao, Berend C. Stoel, M. Els Bakker, Yuanyuan Peng, Jan Stolk, Marius Staring
2016	—	`conf`	SimpleElastix: A User-Friendly, Multi-lingual Library for Medical Image Registration. CVPR Workshops Kasper Marstal, Floris F. Berendsen, Marius Staring, Stefan Klein
2016	—	`conf`	The Design of SuperElastix - A Unifying Framework for a Wide Range of Image Registration Methodologies. CVPR Workshops Floris F. Berendsen, Kasper Marstal, Stefan Klein, Marius Staring
2015	—	`conf`	A Stochastic Quasi-Newton Method for Non-Rigid Image Registration. MICCAI (2) Yuchuan Qiao, Zhuo Sun, Boudewijn P. F. Lelieveldt, Marius Staring
2015	J	`jnl`	Automated extraction and labelling of the arterial tree from whole-body MRA data. Medical Image Anal. Rahil Shahzad, Oleh Dzyubachyk, Marius Staring, Joel Kullberg, Lars Johansson, Håkan Ahlström, Boudewijn P. F. Lelieveldt, Rob J. van der Geest
2015	—	`conf`	Fast linear geodesic shape regression using coupled logdemons registration. ISBI Zhuo Sun, Boudewijn P. F. Lelieveldt, Marius Staring
2015	B	`conf`	Segmentation of branching vascular structures using adaptive subdivision surface fitting. Image Processing Pieter H. Kitslaar, Ronald van't Klooster, Marius Staring, Boudewijn P. F. Lelieveldt, Rob J. van der Geest
2014	J	`jnl`	Brain maturation of the adolescent rat cortex and striatum: Changes in volume and myelination. NeuroImage Luam Mengler, Artem Khmelinskii, Michael Diedenhofen, Chrystelle Po, Marius Staring, Boudewijn P. F. Lelieveldt, Mathias Hoehn
2014	J	`jnl`	Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study. Medical Image Anal. Rina Dewi Rudyanto, Sjoerd Kerkstra, Eva M. van Rikxoort, Catalin I. Fetita, Pierre-Yves Brillet, Christophe Lefevre, Wenzhe Xue, Xiangjun Zhu, Jianming Liang, Ilkay Öksüz, Devrim Ünay, Kamuran Kadipasaoglu, Raúl San José Estépar, James C. Ross, George R. Washko, Juan-Carlos Prieto, Marcela Hernández Hoyos, Maciej Orkisz, Hans Meine, Markus Hüllebrand, Christina Stöcker, Fernando López-Mir, Valery Naranjo, Eliseo Villanueva, Marius Staring, Changyan Xiao, Berend C. Stoel, Anna Fabijanska, Erik Smistad
2014	B	`conf`	Fast automatic estimation of the optimization step size for nonrigid image registration. Image Processing Yuchuan Qiao, Boudewijn P. F. Lelieveldt, Marius Staring
2014	—	`conf`	RegistrationShop: An Interactive 3D Medical Volume Registration System. VCBM Noeska N. Smit, Berend Klein Haneveld, Marius Staring, Elmar Eisemann, Charl P. Botha, Anna Vilanova
2013	B	`conf`	A derivative of stick filter for pulmonary fissure detection in CT images. Image Processing Changyan Xiao, Marius Staring, Juan Wang, Denis P. Shamonin, Berend C. Stoel
2013	J	`jnl`	Comparative exploration of whole-body MR through locally rigid transforms. Int. J. Comput. Assist. Radiol. Surg. Oleh Dzyubachyk, Jorik Blaas, Charl P. Botha, Marius Staring, Monique Reijnierse, Johan L. Bloem, Rob J. van der Geest, Boudewijn P. F. Lelieveldt
2013	J	`jnl`	Fast Parallel Image Registration on CPU and GPU for Diagnostic Classification of Alzheimer's Disease. Frontiers Neuroinformatics Denis P. Shamonin, Esther Bron, Boudewijn P. F. Lelieveldt, Marion Smits, Stefan Klein, Marius Staring
2013	—	`conf`	Joint Intensity Inhomogeneity Correction for Whole-Body MR Data. MICCAI (1) Oleh Dzyubachyk, Rob J. van der Geest, Marius Staring, Peter Börnert, Monique Reijnierse, Johan L. Bloem, Boudewijn P. F. Lelieveldt
2013	J	`jnl`	Multiscale Bi-Gaussian Filter for Adjacent Curvilinear Structures Detection With Application to Vasculature Images. IEEE Trans. Image Process. Changyan Xiao, Marius Staring, Yaonan Wang, Denis P. Shamonin, Berend C. Stoel
2012	B	`conf`	Automatic lung lobe segmentation of COPD patients using iterative B-spline fitting. Image Processing Denis P. Shamonin, Marius Staring, M. Els Bakker, Changyan Xiao, Jan Stolk, Johan H. C. Reiber, Berend C. Stoel
2012	B	`conf`	Local SIMPLE multi atlas-based segmentation applied to lung lobe detection on chest CT. Image Processing Maruti Agarwal, Emile A. Hendriks, Berend C. Stoel, M. Els Bakker, Johan H. C. Reiber, Marius Staring
2011	J	`jnl`	A strain energy filter for 3D vessel enhancement with application to pulmonary CT images. Medical Image Anal. Changyan Xiao, Marius Staring, Denis P. Shamonin, Johan H. C. Reiber, Jan Stolk, Berend C. Stoel
2011	—	`conf`	Automated Registration of Whole-Body Follow-Up MicroCT Data of Mice. MICCAI (2) Martin Baiker, Marius Staring, Clemens W. G. M. Löwik, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2011	J	`jnl`	Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Medical Imaging Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim
2011	B	`conf`	Evaluation of optimization methods for intensity-based 2D-3D registration in x-ray guided interventions. Image Processing I. M. J. van der Bom, Stefan Klein, Marius Staring, R. Homan, Lambertus W. Bartels, Josien P. W. Pluim
2011	—	`conf`	Preconditioned Stochastic Gradient Descent Optimisation for Monomodal Image Registration. MICCAI (2) Stefan Klein, Marius Staring, Patrik Andersson, Josien P. W. Pluim
2011	J	`jnl`	Semi-automatic construction of reference standards for evaluation of image registration. Medical Image Anal. Keelin Murphy, Bram van Ginneken, Stefan Klein, Marius Staring, Bartjan de Hoop, Max A. Viergever, Josien P. W. Pluim
2010	—	`conf`	A Strain Energy Filter for 3D Vessel Enhancement. MICCAI (3) Changyan Xiao, Marius Staring, Denis P. Shamonin, Johan H. C. Reiber, Jan Stolk, Berend C. Stoel
2010	J	`jnl`	Adaptive local multi-atlas segmentation: Application to the heart and the caudate nucleus. Medical Image Anal. Eva M. van Rikxoort, Ivana Isgum, Yulia Arzhaeva, Marius Staring, Stefan Klein, Max A. Viergever, Josien P. W. Pluim, Bram van Ginneken
2010	J	`jnl`	elastix: A Toolbox for Intensity-Based Medical Image Registration. IEEE Trans. Medical Imaging Stefan Klein, Marius Staring, Keelin Murphy, Max A. Viergever, Josien P. W. Pluim
2009	J	`jnl`	Adaptive Stochastic Gradient Descent Optimisation for Image Registration. Int. J. Comput. Vis. Stefan Klein, Josien P. W. Pluim, Marius Staring, Max A. Viergever
2009	J	`jnl`	Multi-Atlas-Based Segmentation With Local Decision Fusion - Application to Cardiac and Aortic Segmentation in CT Scans. IEEE Trans. Medical Imaging Ivana Isgum, Marius Staring, Annemarieke Rutten, Mathias Prokop, Max A. Viergever, Bram van Ginneken
2009	J	`jnl`	Registration of Cervical MRI Using Multifeature Mutual Information. IEEE Trans. Medical Imaging Marius Staring, Uulke A. van der Heide, Stefan Klein, Max A. Viergever, Josien P. W. Pluim
2009	—	`conf`	The 3D Moore-Rayleigh Test for the Quantitative Groupwise Comparison of MR Brain Images. IPMI Alize E. H. Scheenstra, Michael Muskulus, Marius Staring, Arn M. J. M. van den Maagdenberg, Sjoerd Verduyn Lunel, Johan H. C. Reiber, Louise van der Weerd, Jouke Dijkstra
2009	B	`conf`	Towards local estimation of emphysema progression using image registration. Image Processing Marius Staring, M. Els Bakker, Denis P. Shamonin, Jan Stolk, Johan H. C. Reiber, Berend C. Stoel
2008	B	`conf`	Adaptive local multi-atlas segmentation: application to heart segmentation in chest CT scans. Image Processing Eva M. van Rikxoort, Ivana Isgum, Marius Staring, Stefan Klein, Bram van Ginneken
2008	—	`conf`	Semi-automatic Reference Standard Construction for Quantitative Evaluation of Lung CT Registration. MICCAI (2) Keelin Murphy, Bram van Ginneken, Josien P. W. Pluim, Stefan Klein, Marius Staring
2007	J	`jnl`	Evaluation of Optimization Methods for Nonrigid Medical Image Registration Using Mutual Information and B-Splines. IEEE Trans. Image Process. Stefan Klein, Marius Staring, Josien P. W. Pluim
2007	—	`conf`	Segmentation of the Prostate in MR Images by Atlas Matching. ISBI Stefan Klein, Uulke A. van der Heide, Bas W. Raaymakers, Alexis N. T. J. Kotte, Marius Staring, Josien P. W. Pluim
2006	—	`conf`	A Comparison of Acceleration Techniques for Nonrigid Medical Image Registration. WBIR Stefan Klein, Marius Staring, Josien P. W. Pluim
2006	B	`conf`	Nonrigid registration using a rigidity constraint. Image Processing Marius Staring, Stefan Klein, Josien P. W. Pluim
2005	B	`conf`	Comparison of gradient approximation techniques for optimisation of mutual information in nonrigid registration. Image Processing Stefan Klein, Marius Staring, Josien P. W. Pluim
2005	B	`conf`	Nonrigid registration with adaptive content-based filtering of the deformation field. Image Processing Marius Staring, Stefan Klein, Josien P. W. Pluim
2004	—	`conf`	Adaptive quantization watermarking. Security, Steganography, and Watermarking of Multimedia Contents Job Oostveen, Ton Kalker, Marius Staring
2003	—	`conf`	Optimal distortion compensation for quantization watermarking. ICIP (2) Marius Staring, Job Oostveen, Ton Kalker