Margaret R. Karagas

20 papers C 1Misc 2Journal 14Unranked 3
YearRankTypeTitle / Venue / Authors
2021 J jnl
Prediction of an outcome using NETwork Clusters (NET-C).
Comput. Biol. Chem.
Jai Woo Lee, Jie Zhou, Erika L. Moen, Tracy Punshon, Anne Gatewood Hoen, Megan E. Romano, Margaret R. Karagas, Jiang Gui
2020 J jnl
Identification of microbial interaction network: zero-inflated latent Ising model based approach.
BioData Min.
Jie Zhou, Weston D. Viles, Boran Lu, Zhigang Li, Juliette C. Madan, Margaret R. Karagas, Jiang Gui, Anne Gatewood Hoen
2019 J jnl
An Integrated Gaussian Graphical Model to evaluate the impact of exposures on metabolic networks.
Comput. Biol. Medicine
Jai Woo Lee, Erika L. Moen, Tracy Punshon, Anne Gatewood Hoen, Delisha Stewart, Hongzhe Li, Margaret R. Karagas, Jiang Gui
2019 J jnl
Estimation of environmental exposure: interpolation, kernel density estimation or snapshotting.
Ann. GIS
Xun Shi, Meifang Li, Olivia Hunter, Bart Guetti, Angeline S. Andrew, Elijah Stommel, Walter Bradley, Margaret R. Karagas
2017 J jnl
Penalized estimation of sparse concentration matrices based on prior knowledge with applications to placenta elemental data.
Comput. Biol. Chem.
Jai Woo Lee, Tracy Punshon, Erika L. Moen, Margaret R. Karagas, Jiang Gui
2016 J jnl
Detecting gene-gene interactions using a permutation-based random forest method.
BioData Min.
Jing Li, James D. Malley, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2015 J jnl
Functional dyadicity and heterophilicity of gene-gene interactions in statistical epistasis networks.
BioData Min.
Ting Hu, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2014 J jnl
Functional genomics annotation of a statistical epistasis network associated with bladder cancer susceptibility.
BioData Min.
Ting Hu, Qinxin Pan, Angeline S. Andrew, Jillian M. Langer, Michael D. Cole, Craig R. Tomlinson, Margaret R. Karagas, Jason H. Moore
2014 C conf
Incorporating prior expert knowledge in learning Bayesian networks from genetic epidemiological data.
CIBCB
Chengwei Su, Mark E. Borsuk, Angeline S. Andrew, Margaret R. Karagas
2013 — conf
Bladder cancer specific pathway interaction networks.
ECAL
Qinxin Pan, Ting Hu, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2013 J jnl
Research and applications: Role of genetic heterogeneity and epistasis in bladder cancer susceptibility and outcome: a learning classifier system approach.
J. Am. Medical Informatics Assoc.
Ryan J. Urbanowicz, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2013 Misc conf
Statistical Epistasis Networks Reduce the Computational Complexity of Searching Three-Locus Genetic Models.
Pacific Symposium on Biocomputing
Ting Hu, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2013 — conf
Supervising Random Forest Using Attribute Interaction Networks.
EvoBIO
Qinxin Pan, Ting Hu, James D. Malley, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2013 J jnl
Using Bayesian networks to discover relations between genes, environment, and disease.
BioData Min.
Chengwei Su, Angeline S. Andrew, Margaret R. Karagas, Mark E. Borsuk
2011 J jnl
Characterizing Genetic Interactions in Human Disease Association Studies Using Statistical Epistasis Networks.
BMC Bioinform.
Ting Hu, Nicholas A. Sinnott-Armstrong, Jeff Kiralis, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2010 Misc conf
Enabling Personal Genomics with an Explicit Test of Epistasis.
Pacific Symposium on Biocomputing
Casey S. Greene, Daniel S. Himmelstein, Heather H. Nelson, Karl T. Kelsey, Scott M. Williams, Angeline S. Andrew, Margaret R. Karagas, Jason H. Moore
2010 J jnl
Semi-supervised recursively partitioned mixture models for identifying cancer subtypes.
Bioinform.
Devin C. Koestler, Carmen J. Marsit, Brock C. Christensen, Margaret R. Karagas, Raphael Bueno, David J. Sugarbaker, Karl T. Kelsey, Eugene Andres Houseman
2009 J jnl
Copy number variation has little impact on bead-array-based measures of DNA methylation.
Bioinform.
Eugene Andres Houseman, Brock C. Christensen, Margaret R. Karagas, Margaret R. Wrensch, Heather H. Nelson, Joseph Wiemels, Shichun Zheng, John K. Wiencke, Karl T. Kelsey, Carmen J. Marsit
2008 — conf
Analysis of High-throughput DNA Methylation Bead Arrays Utilizing Bayesian Genotyping Algorithms.
BMEI (1)
Yuanyuan Xiao, Mark R. Segal, Eugene Andres Houseman, Joseph Wiemels, John K. Wiencke, Shichun Zheng, Margaret R. Wrensch, Brock C. Christensen, Carmen J. Marsit, Karl T. Kelsey, Heather H. Nelson, Margaret R. Karagas, Ru-Fang Yeh
2008 J jnl
Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions.
BMC Bioinform.
Eugene Andres Houseman, Brock C. Christensen, Ru-Fang Yeh, Carmen J. Marsit, Margaret R. Karagas, Margaret R. Wrensch, Heather H. Nelson, Joseph Wiemels, Shichun Zheng, John K. Wiencke, Karl T. Kelsey