Marcus Oswald

34 papers B 3Misc 1Journal 22Unranked 6
YearRankTypeTitle / Venue / Authors
2022 J jnl
Linear programming based gene expression model (LPM-GEM) predicts the carbon source for Bacillus subtilis.
BMC Bioinform.
Kulwadee Thanamit, Franziska Hörhold, Marcus Oswald, Rainer König
2020 J jnl
Reprogramming of macrophages employing gene regulatory and metabolic network models.
PLoS Comput. Biol.
Franziska Hörhold, David Eisel, Marcus Oswald, Amol Kolte, Daniela Röll, Wolfram Osen, Stefan B. Eichmüller, Rainer König
2019 J jnl
Modelling TERT regulation across 19 different cancer types based on the MIPRIP 2.0 gene regulatory network approach.
BMC Bioinform.
Alexandra Poos, Theresa Kordaß, Amol Kolte, Volker Ast, Marcus Oswald, Karsten Rippe, Rainer König
2014 J jnl
A branch-and-bound algorithm for the coupled task problem.
Math. Methods Oper. Res.
József Békési, Gábor Galambos, Michael N. Jung, Marcus Oswald, Gerhard Reinelt
2014 J jnl
Characterizing Protein Interactions Employing a Genome-Wide siRNA Cellular Phenotyping Screen.
PLoS Comput. Biol.
Apichat Suratanee, Martin H. Schaefer, Matthew J. Betts, Zita Soons, Heiko A. Mannsperger, Nathalie Harder, Marcus Oswald, Markus Gipp, Ellen Ramminger, Guillermo Marcus Martinez, Reinhard Männer, Karl Rohr, Erich E. Wanker, Robert B. Russell, Miguel A. Andrade-Navarro, Roland Eils, Rainer König
2014 J jnl
Estimating the activity of transcription factors by the effect on their target genes.
Bioinform.
Theresa Schacht, Marcus Oswald, Roland Eils, Stefan B. Eichmüller, Rainer König
2014 J jnl
Network topology-based detection of differential gene regulation and regulatory switches in cell metabolism and signaling.
BMC Syst. Biol.
Rosario M. Piro, Stefan Wiesberg, Gunnar Schramm, Nico Rebel, Marcus Oswald, Roland Eils, Gerhard Reinelt, Rainer König
2012 J jnl
Exact solution of the 2-dimensional grid arrangement problem.
Discret. Optim.
Marcus Oswald, Gerhard Reinelt, Stefan Wiesberg
2012 J jnl
New results on the Windy Postman Problem.
Math. Program.
Angel Corberán, Marcus Oswald, Isaac Plana, Gerhard Reinelt, José M. Sanchis
2011 J jnl
A Branch and Cut solver for the maximum stable set problem.
J. Comb. Optim.
Steffen Rebennack, Marcus Oswald, Dirk Oliver Theis, Hanna Seitz, Gerhard Reinelt, Panos M. Pardalos
2011 J jnl
Optimal linear arrangements using betweenness variables.
Math. Program. Comput.
Alberto Caprara, Marcus Oswald, Gerhard Reinelt, Robert Schwarz, Emiliano Traversi
2010 J jnl
PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways.
Bioinform.
Gunnar Schramm, Stefan Wiesberg, Nicolle Diessl, Anna-Lena Kranz, Vitalia Sagulenko, Marcus Oswald, Gerhard Reinelt, Frank Westermann, Roland Eils, Rainer König
2010 J jnl
Speeding up IP-based algorithms for constrained quadratic 0-1 optimization.
Math. Program.
Christoph Buchheim, Frauke Liers, Marcus Oswald
2009 — conf
Analyzing the regulation of metabolic pathways in human breast cancer.
LWA
Eva-Maria Surmann, Gunnar Schramm, Stefan Wiesberg, Marcus Oswald, Gerhard Reinelt, Roland Eils, Rainer König
2009 J jnl
Improved analysis of an algorithm for the coupled task problem with UET jobs.
Oper. Res. Lett.
József Békési, Gábor Galambos, Marcus Oswald, Gerhard Reinelt
2009 J jnl
The simultaneous consecutive ones problem.
Theor. Comput. Sci.
Marcus Oswald, Gerhard Reinelt
2008 — conf
A Basic Toolbox for Constrained Quadratic 0/1 Optimization.
WEA
Christoph Buchheim, Frauke Liers, Marcus Oswald
2008 J jnl
Local cuts revisited.
Oper. Res. Lett.
Christoph Buchheim, Frauke Liers, Marcus Oswald
2008 J jnl
Machine learning based analyses on metabolic networks supports high-throughput knockout screens.
BMC Syst. Biol.
Kitiporn Plaimas, Jan-Phillip Mallm, Marcus Oswald, Fabian Svara, Victor Sourjik, Roland Eils, Rainer König
2007 B conf
Compression of Digital Road Networks.
SSTD
Jonghyun Suh, Sungwon Jung, Martin Pfeifle, Khoa T. Vo, Marcus Oswald, Gerhard Reinelt
2007 — conf
Integrating Genomic and Transcriptomic Data into Graph Based Approaches for Defining Essential Reactions in the Metabolic Network of Escherichia Coli.
LWA
Kitiporn Plaimas, Marcus Oswald, Roland Eils, Rainer König
2007 J jnl
On the graphical relaxation of the symmetric traveling salesman polytope.
Math. Program.
Marcus Oswald, Gerhard Reinelt, Dirk Oliver Theis
2007 — conf
Optimizing in Graphs with Expensive Computation of Edge Weights.
OR
Frank Noé, Marcus Oswald, Gerhard Reinelt
2006 J jnl
Computing Best Transition Pathways in High-Dimensional Dynamical Systems: Application to the
Multiscale Model. Simul.
Frank Noé, Marcus Oswald, Gerhard Reinelt, Stefan Fischer, Jeremy C. Smith
2006 J jnl
Discovering functional gene expression patterns in the metabolic network of
BMC Bioinform.
Rainer König, Gunnar Schramm, Marcus Oswald, Hanna Seitz, Sebastian Sager, Marc Zapatka, Gerhard Reinelt, Roland Eils
2006 — conf
Pattern recognition of gene expression data on biochemical networks with simple wavelet transforms.
LWA
Gunnar Schramm, Marcus Oswald, Hanna Seitz, Sebastian Sager, Marc Zapatka, Gerhard Reinelt, Roland Eils, Rainer König
2005 B conf
Not Every GTSP Facet Induces an STSP Facet.
IPCO
Marcus Oswald, Gerhard Reinelt, Dirk Oliver Theis
2004 J jnl
An exact algorithm for scheduling identical coupled tasks.
Math. Methods Oper. Res.
Dino Ahr, József Békési, Gábor Galambos, Marcus Oswald, Gerhard Reinelt
2004 — ch.
Computing Optimal Consecutive Ones Matrices.
The Sharpest Cut
Marcus Oswald, Gerhard Reinelt
2003 J jnl
The weighted consecutive ones problem for a fixed number of rows or columns.
Oper. Res. Lett.
Marcus Oswald, Gerhard Reinelt
2003 — —
Weighted Consecutive Ones Problems
Marcus Oswald
2001 — conf
Constructing New Facets of the Consecutive Ones Polytope.
Combinatorial Optimization
Marcus Oswald, Gerhard Reinelt
2000 Misc conf
Polyhedral Aspects of the Consecutive Ones Problem.
COCOON
Marcus Oswald, Gerhard Reinelt
1998 B conf
Consecutive Ones and a Betweenness Problem in Computational Biology.
IPCO
Thomas Christof, Marcus Oswald, Gerhard Reinelt