Marco Oliva

15 papers A 1B 4C 1Journal 6Unranked 3
YearRankTypeTitle / Venue / Authors
2024 J jnl
Pfp-fm: an accelerated FM-index.
Algorithms Mol. Biol.
Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie
2024 A conf
Re²Pair: Increasing the Scalability of RePair by Decreasing Memory Usage.
ESA
Justin Kim, Rahul Varki, Marco Oliva, Christina Boucher
2023 C conf
Acceleration of FM-Index Queries Through Prefix-Free Parsing.
WABI
Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie
2023 J jnl
Acceleration of FM-index Queries Through Prefix-free Parsing.
CoRR
Aaron Hong, Marco Oliva, Dominik Köppl, Hideo Bannai, Christina Boucher, Travis Gagie
2023 B conf
Recursive Prefix-Free Parsing for Building Big BWTs.
DCC
Marco Oliva, Travis Gagie, Christina Boucher
2022 — conf
An interleaved hardware-accelerated k-mer parser.
BIBM
Franco Milicchio, Marco Oliva, Mattia Prosperi
2022 B conf
CSTs for Terabyte-Sized Data.
DCC
Marco Oliva, Davide Cenzato, Massimiliano Rossi, Zsuzsanna Lipták, Travis Gagie, Christina Boucher
2022 J jnl
Finding Maximal Exact Matches Using the r-Index.
J. Comput. Biol.
Massimiliano Rossi, Marco Oliva, Paola Bonizzoni, Ben Langmead, Travis Gagie, Christina Boucher
2022 B conf
Graph Neural Networks for Relational Inductive Bias in Vision-based Deep Reinforcement Learning of Robot Control.
IJCNN
Marco Oliva, Soubarna Banik, Josip Josifovski, Alois C. Knoll
2022 J jnl
Graph Neural Networks for Relational Inductive Bias in Vision-based Deep Reinforcement Learning of Robot Control.
CoRR
Marco Oliva, Soubarna Banik, Josip Josifovski, Alois C. Knoll
2022 J jnl
MONI: A Pangenomic Index for Finding Maximal Exact Matches.
J. Comput. Biol.
Massimiliano Rossi, Marco Oliva, Ben Langmead, Travis Gagie, Christina Boucher
2021 B conf
Efficiently Merging r-indexes.
DCC
Marco Oliva, Massimiliano Rossi, Jouni Sirén, Giovanni Manzini, Tamer Kahveci, Travis Gagie, Christina Boucher
2020 J jnl
Portable nanopore analytics: are we there yet?
Bioinform.
Marco Oliva, Franco Milicchio, Kaden King, Grace Benson, Christina Boucher, Mattia Prosperi, Inanç Birol
2019 — conf
Unexpected Predictors of Antibiotic Resistance in Housekeeping Genes of Staphylococcus Aureus.
BCB
Mattia Prosperi, Taj Azarian, Judith A. Johnson, Marco Salemi, Franco Milicchio, Marco Oliva
2018 — conf
Third-generation sequencing data analytics on mobile devices: cache oblivious and out-of-core approaches as a proof-of-concept.
FNC/MobiSPC
Franco Milicchio, Marco Oliva, Christina Boucher, Mattia Prosperi