Manuel Jorge Cardoso

93 papers A* 1B 6Journal 40Unranked 42

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	False Promises in Medical Imaging AI? Assessing Validity of Outperformance Claims. CoRR Evangelia Christodoulou, Annika Reinke, Pascaline Andrè, Patrick Godau, Piotr Kalinowski, Rola Houhou, Selen Erkan, Carole H. Sudre, Ninon Burgos, Sofiène Boutaj, Sophie Loizillon, Maëlys Solal, Veronika Cheplygina, Charles Heitz, Michal Kozubek, Michela Antonelli, Nicola Rieke, Antoine Gilson, Leon D. Mayer, Minu Dietlinde Tizabi, Manuel Jorge Cardoso, Amber L. Simpson, Annette Kopp-Schneider, Gaël Varoquaux, Olivier Colliot, Lena Maier-Hein
2025	J	`jnl`	Generalizable automated ischaemic stroke lesion segmentation with vision transformers. CoRR Chris Foulon, Robert J. Gray, James K. Ruffle, Jonathan Best, Tianbo Xu, Henry C. Watkins, Jane Rondina, Guilherme Pombo, Dominic Giles, Paul Wright, Marcela Ovando Tellez, Hans Rolf Jäger, Manuel Jorge Cardoso, Sébastien Ourselin, Geraint Rees, Parashkev Nachev
2025	J	`jnl`	MR-CLIP: Efficient Metadata-Guided Learning of MRI Contrast Representations. CoRR Mehmet Yigit Avci, Pedro Borges, Paul Wright, Mehmet Yigitsoy, Sébastien Ourselin, Manuel Jorge Cardoso
2024	J	`jnl`	Confidence intervals uncovered: Are we ready for real-world medical imaging AI? CoRR Evangelia Christodoulou, Annika Reinke, Rola Houhou, Piotr Kalinowski, Selen Erkan, Carole H. Sudre, Ninon Burgos, Sofiène Boutaj, Sophie Loizillon, Maëlys Solal, Nicola Rieke, Veronika Cheplygina, Michela Antonelli, Leon D. Mayer, Minu Dietlinde Tizabi, Manuel Jorge Cardoso, Amber L. Simpson, Paul F. Jäger, Annette Kopp-Schneider, Gaël Varoquaux, Olivier Colliot, Lena Maier-Hein
2023	—	`conf`	InterSynth: A Semi-Synthetic Framework for Benchmarking Prescriptive Inference from Observational Data. ML4MHD Dominic Giles, Robert J. Gray, Chris Foulon, Guilherme Pombo, Tianbo Xu, James K. Ruffle, Hans Rolf Jäger, Manuel Jorge Cardoso, Sébastien Ourselin, Geraint Rees, Ashwani Jha, Parashkev Nachev
2023	J	`jnl`	The Liver Tumor Segmentation Benchmark (LiTS). Medical Image Anal. Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li, Eugene Vorontsov, Avi Ben-Cohen, Georgios Kaissis, Adi Szeskin, Colin Jacobs, Gabriel Efrain Humpire Mamani, Gabriel Chartrand, Fabian Lohöfer, Julian Walter Holch, Wieland H. Sommer, Felix Hofmann, Alexandre Hostettler, Naama Lev-Cohain, Michal Drozdzal, Michal Marianne Amitai, Refael Vivanti, Jacob Sosna, Ivan Ezhov, Anjany Sekuboyina, Fernando Navarro, Florian Kofler, Johannes C. Paetzold, Suprosanna Shit, Xiaobin Hu, Jana Lipková, Markus Rempfler, Marie Piraud, Jan Kirschke, Benedikt Wiestler, Zhiheng Zhang, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Michela Antonelli, Woong Bae, Miriam Bellver, Lei Bi, Hao Chen, Grzegorz Chlebus, Erik B. Dam, Qi Dou, Chi-Wing Fu, Bogdan Georgescu, Xavier Giró-i-Nieto, Felix Grün, Xu Han, Pheng-Ann Heng, Jürgen Hesser, Jan Hendrik Moltz, Christian Igel, Fabian Isensee, Paul Jäger, Fucang Jia, Krishna Chaitanya Kaluva, Mahendra Khened, Ildoo Kim, Jae-Hun Kim, Sungwoong Kim, Simon Kohl, Tomasz K. Konopczynski, Avinash Kori, Ganapathy Krishnamurthi, Fan Li, Hongchao Li, Junbo Li, Xiaomeng Li, John S. Lowengrub, Jun Ma, Klaus H. Maier-Hein, Kevis-Kokitsi Maninis, Hans Meine, Dorit Merhof, Akshay Pai, Mathias Perslev, Jens Petersen, Jordi Pont-Tuset, Jin Qi, Xiaojuan Qi, Oliver Rippel, Karsten Roth, Ignacio Sarasua, Andrea Schenk, Zengming Shen, Jordi Torres, Christian Wachinger, Chunliang Wang, Leon Weninger, Jianrong Wu, Daguang Xu, Xiaoping Yang, Simon Chun-Ho Yu, Yading Yuan, Miao Yue, Liping Zhang, Manuel Jorge Cardoso, Spyridon Bakas, Rickmer Braren, Volker Heinemann, Christopher Pal, An Tang, Samuel Kadoury, Luc Soler, Bram van Ginneken, Hayit Greenspan, Leo Joskowicz, Bjoern H. Menze
2022	—	`ed.`	Domain Adaptation and Representation Transfer - 4th MICCAI Workshop, DART 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings DART@MICCAI Konstantinos Kamnitsas, Lisa M. Koch, Mobarakol Islam, Ziyue Xu, Manuel Jorge Cardoso, Qi Dou, Nicola Rieke, Sotirios A. Tsaftaris
2021	—	`ed.`	Domain Adaptation and Representation Transfer, and Affordable Healthcare and AI for Resource Diverse Global Health - Third MICCAI Workshop, DART 2021, and First MICCAI Workshop, FAIR 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27 and October 1, 2021, Proceedings DART/FAIR@MICCAI Shadi Albarqouni, Manuel Jorge Cardoso, Qi Dou, Konstantinos Kamnitsas, Bishesh Khanal, Islem Rekik, Nicola Rieke, Debdoot Sheet, Sotirios A. Tsaftaris, Daguang Xu, Ziyue Xu
2021	J	`jnl`	Equitable modelling of brain imaging by counterfactual augmentation with morphologically constrained 3D deep generative models. CoRR Guilherme Pombo, Robert J. Gray, Manuel Jorge Cardoso, Sébastien Ourselin, Geraint Rees, John Ashburner, Parashkev Nachev
2021	J	`jnl`	Imitation learning for improved 3D PET/MR attenuation correction. Medical Image Anal. Kerstin Kläser, Thomas Varsavsky, Pawel Markiewicz, Tom Vercauteren, Alexander Hammers, David Atkinson, Kris Thielemans, Brian F. Hutton, Manuel Jorge Cardoso, Sébastien Ourselin
2021	J	`jnl`	Learning joint segmentation of tissues and brain lesions from task-specific hetero-modal domain-shifted datasets. Medical Image Anal. Reuben Dorent, Thomas C. Booth, Wenqi Li, Carole H. Sudre, Sina Kafiabadi, Manuel Jorge Cardoso, Sébastien Ourselin, Tom Vercauteren
2021	—	`conf`	The Role of MRI Physics in Brain Segmentation CNNs: Achieving Acquisition Invariance and Instructive Uncertainties. SASHIMI@MICCAI Pedro Borges, Richard Shaw, Thomas Varsavsky, Kerstin Kläser, David Thomas, Ivana Drobnjak, Sébastien Ourselin, Manuel Jorge Cardoso
2020	J	`jnl`	Generalised boundary shift integral for longitudinal assessment of spinal cord atrophy. NeuroImage Ferran Prados, Marcello Moccia, Aubrey Johnson, Marios C. Yiannakas, Francesco Grussu, Manuel Jorge Cardoso, Olga Ciccarelli, Sébastien Ourselin, Frederik Barkhof, Claudia A. M. Wheeler-Kingshott
2020	—	`conf`	Hierarchical Brain Parcellation with Uncertainty. UNSURE/GRAIL@MICCAI Mark S. Graham, Carole H. Sudre, Thomas Varsavsky, Petru-Daniel Tudosiu, Parashkev Nachev, Sébastien Ourselin, Manuel Jorge Cardoso
2020	J	`jnl`	Learning joint segmentation of tissues and brain lesions from task-specific hetero-modal domain-shifted datasets. CoRR Reuben Dorent, Thomas C. Booth, Wenqi Li, Carole H. Sudre, Sina Kafiabadi, Manuel Jorge Cardoso, Sébastien Ourselin, Tom Vercauteren
2020	J	`jnl`	Substantially thinner internal granular layer and reduced molecular layer surface in the cerebellar cortex of the Tc1 mouse model of down syndrome - a comprehensive morphometric analysis with active staining contrast-enhanced MRI. NeuroImage Da Ma, Manuel Jorge Cardoso, Maria A. Zuluaga, Marc Modat, Nick M. Powell, Frances K. Wiseman, Jon O. Cleary, Benjamin Sinclair, Ian F. Harrison, Bernard Siow, Karteek Popuri, Sieun Lee, Joanne A. Matsubara, Marinko V. Sarunic, Mirza Faisal Beg, Victor L. J. Tybulewicz, Elizabeth M. C. Fisher, Mark F. Lythgoe, Sébastien Ourselin
2019	J	`jnl`	Grey matter sublayer thickness estimation in themouse cerebellum. CoRR Da Ma, Manuel Jorge Cardoso, Maria A. Zuluaga, Marc Modat, Nick M. Powell, Frances K. Wiseman, Victor L. J. Tybulewicz, Elizabeth M. C. Fisher, Mark F. Lythgoe, Sébastien Ourselin
2019	J	`jnl`	Machine learning and glioma imaging biomarkers. CoRR Thomas C. Booth, Matthew Williams, Aysha Luis, Manuel Jorge Cardoso, Ashkan Keyoumars, Haris Shuaib
2019	J	`jnl`	Methods and open-source toolkit for analyzing and visualizing challenge results. CoRR Manuel Wiesenfarth, Annika Reinke, Bennett A. Landman, Manuel Jorge Cardoso, Lena Maier-Hein, Annette Kopp-Schneider
2019	J	`jnl`	Multi-Domain Adaptation in Brain MRI through Paired Consistency and Adversarial Learning. CoRR Mauricio Orbes-Arteaga, Thomas Varsavsky, Carole H. Sudre, Zach Eaton-Rosen, Lewis J. Haddow, Lauge Sørensen, Mads Nielsen, Akshay Pai, Sébastien Ourselin, Marc Modat, Parashkev Nachev, Manuel Jorge Cardoso
2019	B	`conf`	PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation. Image Processing Mauricio Orbes-Arteaga, Lauge Sørensen, Manuel Jorge Cardoso, Marc Modat, Sébastien Ourselin, Stefan Sommer, Mads Nielsen, Christian Igel, Akshay Pai
2019	A*	`conf`	Stochastic Filter Groups for Multi-Task CNNs: Learning Specialist and Generalist Convolution Kernels. ICCV Felix J. S. Bragman, Ryutaro Tanno, Sébastien Ourselin, Daniel C. Alexander, Manuel Jorge Cardoso
2018	J	`jnl`	PADDIT: Probabilistic Augmentation of Data using Diffeomorphic Image Transformation. CoRR Mauricio Orbes-Arteaga, Lauge Sørensen, Manuel Jorge Cardoso, Marc Modat, Sébastien Ourselin, Stefan Sommer, Mads Nielsen, Christian Igel, Akshay Pai
2017	J	`jnl`	Longitudinal multiple sclerosis lesion segmentation: Resource and challenge. NeuroImage Aaron Carass, Snehashis Roy, Amod Jog, Jennifer L. Cuzzocreo, Elizabeth M. Sweeney, Adrian Gherman, Julia Button, James Nguyen, Ferran Prados, Carole H. Sudre, Manuel Jorge Cardoso, Niamh Cawley, Olga Ciccarelli, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin, Laurence Catanese, Hrishikesh Deshpande, Pierre Maurel, Olivier Commowick, Christian Barillot, Xavier Tomas-Fernandez
2017	J	`jnl`	Longitudinal segmentation of age-related white matter hyperintensities. Medical Image Anal. Carole H. Sudre, Manuel Jorge Cardoso, Sébastien Ourselin
2017	J	`jnl`	Spinal cord grey matter segmentation challenge. NeuroImage Ferran Prados, John Ashburner, Claudia Blaiotta, Tom Brosch, Julio Carballido-Gamio, Manuel Jorge Cardoso, Benjamin N. Conrad, Esha Datta, Gergely Dávid, Benjamin De Leener, Sara M. Dupont, Patrick Freund, Claudia A. M. Gandini Wheeler-Kingshott, Francesco Grussu, Roland G. Henry, Bennett A. Landman, Emil Ljungberg, Bailey Lyttle, Sébastien Ourselin, Nico Papinutto, Salvatore Saporito, Regina Schlaeger, Seth A. Smith, Paul E. Summers, Roger C. Tam, Marios C. Yiannakas, Alyssa H. Zhu, Julien Cohen-Adad
2016	J	`jnl`	A multi-time-point modality-agnostic patch-based method for lesion filling in multiple sclerosis. NeuroImage Ferran Prados, Manuel Jorge Cardoso, Baris Kanber, Olga Ciccarelli, Raju Kapoor, Claudia A. M. Wheeler-Kingshott, Sébastien Ourselin
2016	J	`jnl`	Editorial on Special Issue on Probabilistic Models for Biomedical Image Analysis. Comput. Vis. Image Underst. Tal Arbel, Manuel Jorge Cardoso, William M. Wells III, Albert C. S. Chung, Doina Precup
2016	B	`conf`	Fitting parametric models of diffusion MRI in regions of partial volume. Image Processing Zach Eaton-Rosen, Manuel Jorge Cardoso, Andrew Melbourne, Eliza Orasanu, Alan Bainbridge, Giles S. Kendall, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2016	J	`jnl`	Variational inference for medical image segmentation. Comput. Vis. Image Underst. Claudia Blaiotta, Manuel Jorge Cardoso, John Ashburner
2015	—	`conf`	A Riemannian Framework for Intrinsic Comparison of Closed Genus-Zero Shapes. IPMI Boris A. Gutman, P. Thomas Fletcher, Manuel Jorge Cardoso, Greg M. Fleishman, Marco Lorenzi, Paul M. Thompson, Sébastien Ourselin
2015	B	`conf`	Automatic assessment of volume asymmetries applied to hip abductor muscles in patients with hip arthroplasty. Image Processing Christian Klemt, Marc Modat, Jonas Pichat, Manuel Jorge Cardoso, Johann Henckel, Alister Hart, Sébastien Ourselin
2015	J	`jnl`	Bayesian Model Selection for Pathological Neuroimaging Data Applied to White Matter Lesion Segmentation. IEEE Trans. Medical Imaging Carole H. Sudre, Manuel Jorge Cardoso, Willem H. Bouvy, Geert Jan Biessels, Josephine Barnes, Sébastien Ourselin
2015	J	`jnl`	Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. Medical Image Anal. Ivana Isgum, Manon J. N. L. Benders, Brian B. Avants, Manuel Jorge Cardoso, Serena J. Counsell, Elda Fischi Gomez, Laura Gui, Petra S. Hüppi, Karina J. Kersbergen, Antonios Makropoulos, Andrew Melbourne, Pim Moeskops, Christian P. Mol, Maria Kuklisova-Murgasova, Daniel Rueckert, Julia A. Schnabel, Vedran Srhoj-Egekher, Jue Wu, Siying Wang, Linda S. de Vries, Max A. Viergever
2015	J	`jnl`	Geodesic Information Flows: Spatially-Variant Graphs and Their Application to Segmentation and Fusion. IEEE Trans. Medical Imaging Manuel Jorge Cardoso, Marc Modat, Robin Wolz, Andrew Melbourne, David M. Cash, Daniel Rueckert, Sébastien Ourselin
2015	—	`conf`	Grey Matter Sublayer Thickness Estimation in the Mouse Cerebellum. MICCAI (3) Da Ma, Manuel Jorge Cardoso, Maria A. Zuluaga, Marc Modat, Nick M. Powell, Frances K. Wiseman, Victor L. J. Tybulewicz, Elizabeth M. C. Fisher, Mark F. Lythgoe, Sébastien Ourselin
2015	—	`conf`	Improving MRI Brain Image Classification with Anatomical Regional Kernels. MLMMI@ICML Jonathan Young, Alex F. Mendelson, Manuel Jorge Cardoso, Marc Modat, John Ashburner, Sébastien Ourselin
2015	J	`jnl`	In vivo imaging of tau pathology using multi-parametric quantitative MRI. NeuroImage Jack A. Wells, James M. O'Callaghan, Holly E. Holmes, Nick M. Powell, Ross A. Johnson, Bernard Siow, F. Torrealdea, Ozama Ismail, Simon Walker-Samuel, Xavier Golay, M. Rega, Simon Richardson, Marc Modat, Manuel Jorge Cardoso, Sébastien Ourselin, Adam J. Schwarz, Zeshan Ahmed, Tracey K. Murray, Michael J. O'Neill, Emily C. Collins, Niall Colgan, Mark F. Lythgoe
2015	—	`ed.`	Information Processing in Medical Imaging - 24th International Conference, IPMI 2015, Sabhal Mor Ostaig, Isle of Skye, UK, June 28 - July 3, 2015, Proceedings IPMI Sébastien Ourselin, Daniel C. Alexander, Carl-Fredrik Westin, Manuel Jorge Cardoso
2015	J	`jnl`	Longitudinal measurement of the developing grey matter in preterm subjects using multi-modal MRI. NeuroImage Zach Eaton-Rosen, Andrew Melbourne, Eliza Orasanu, Manuel Jorge Cardoso, Marc Modat, Alan Bainbridge, Giles S. Kendall, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2015	J	`jnl`	Probabilistic non-linear registration with spatially adaptive regularisation. Medical Image Anal. Ivor J. A. Simpson, Manuel Jorge Cardoso, Marc Modat, David M. Cash, Mark W. Woolrich, Jesper L. R. Andersson, Julia A. Schnabel, Sébastien Ourselin
2015	J	`jnl`	Right ventricle segmentation from cardiac MRI: A collation study. Medical Image Anal. Caroline Petitjean, Maria A. Zuluaga, Wenjia Bai, Jean-Nicolas Dacher, Damien Grosgeorge, Jérôme Caudron, Su Ruan, Ismail Ben Ayed, Manuel Jorge Cardoso, Hsiang-Chou Chen, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Christos Davatzikos, Jimit Doshi, Güray Erus, Oskar M. O. Maier, Cyrus M. S. Nambakhsh, Yangming Ou, Sébastien Ourselin, Chun-Wei Peng, Nicholas S. Peters, Terry M. Peters, Martin Rajchl, Daniel Rueckert, Andrés Santos, Wenzhe Shi, Ching-Wei Wang, Haiyan Wang, Jing Yuan
2015	—	`conf`	Robust CT Synthesis for Radiotherapy Planning: Application to the Head and Neck Region. MICCAI (2) Ninon Burgos, Manuel Jorge Cardoso, Filipa Guerreiro, Catarina Veiga, Marc Modat, Jamie McClelland, Antje-Christin Knopf, Shonit Punwani, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2015	—	`conf`	Scale Factor Point Spread Function Matching: Beyond Aliasing in Image Resampling. MICCAI (2) Manuel Jorge Cardoso, Marc Modat, Tom Vercauteren, Sébastien Ourselin
2015	J	`jnl`	Simulated field maps for susceptibility artefact correction in interventional MRI. Int. J. Comput. Assist. Radiol. Surg. Martin Kochan, Pankaj Daga, Ninon Burgos, Mark White, Manuel Jorge Cardoso, Laura Mancini, Gavin P. Winston, Andrew W. McEvoy, John S. Thornton, Tarek A. Yousry, John S. Duncan, Danail Stoyanov, Sébastien Ourselin
2015	J	`jnl`	Stability, structure and scale: improvements in multi-modal vessel extraction for SEEG trajectory planning. Int. J. Comput. Assist. Radiol. Surg. Maria A. Zuluaga, Roman Rodionov, Mark Nowell, Sufyan Achhala, Gergely Zombori, Alex F. Mendelson, Manuel Jorge Cardoso, Anna Miserocchi, Andrew W. McEvoy, John S. Duncan, Sébastien Ourselin
2015	—	`conf`	Subject-specific Models for the Analysis of Pathological FDG PET Data. MICCAI (2) Ninon Burgos, Manuel Jorge Cardoso, Alex F. Mendelson, Jonathan M. Schott, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2015	—	`conf`	Template-Based Multimodal Joint Generative Model of Brain Data. IPMI Manuel Jorge Cardoso, Carole H. Sudre, Marc Modat, Sébastien Ourselin
2014	—	`conf`	An Oblique Approach to Prediction of Conversion to Alzheimer's Disease with Multikernel Gaussian Processes. MLINI@NIPS Jonathan Young, Marc Modat, Manuel Jorge Cardoso, John Ashburner, Sébastien Ourselin
2014	J	`jnl`	Attenuation Correction Synthesis for Hybrid PET-MR Scanners: Application to Brain Studies. IEEE Trans. Medical Imaging Ninon Burgos, Manuel Jorge Cardoso, Kris Thielemans, Marc Modat, Stefano Pedemonte, John C. Dickson, Anna Barnes, Rebekah Ahmed, Colin J. Mahoney, Jonathan M. Schott, John S. Duncan, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2014	—	`conf`	Bayesian Model Selection for Pathological Data. MICCAI (1) Carole H. Sudre, Manuel Jorge Cardoso, Willem H. Bouvy, Geert Jan Biessels, Josephine Barnes, Sébastien Ourselin
2014	—	`ed.`	Bayesian and grAphical Models for Biomedical Imaging - First International Workshop, BAMBI 2014, Cambridge, MA, USA, September 18, 2014, Revised Selected Papers BAMBI Manuel Jorge Cardoso, Ivor J. A. Simpson, Tal Arbel, Doina Precup, Annemie Ribbens
2014	B	`conf`	Bilayered anatomically constrained split-and-merge expectation maximisation algorithm (BiASM) for brain segmentation. Image Processing Carole H. Sudre, Manuel Jorge Cardoso, Sébastien Ourselin
2014	—	`conf`	Longitudinal Measurement of the Developing Thalamus in the Preterm Brain Using Multi-modal MRI. MICCAI (2) Zach Eaton-Rosen, Andrew Melbourne, Eliza Orasanu, Marc Modat, Manuel Jorge Cardoso, Alan Bainbridge, Giles S. Kendall, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2014	—	`conf`	Multi-atlas based pathological stratification of D-TGA congenital heart disease. ISBI Maria A. Zuluaga, Alex F. Mendelson, Manuel Jorge Cardoso, Andrew Mayall Taylor, Sébastien Ourselin
2014	—	`conf`	Multi-modal Measurement of the Myelin-to-Axon Diameter g-ratio in Preterm-born Neonates and Adult Controls. MICCAI (2) Andrew Melbourne, Zach Eaton-Rosen, Enrico De Vita, Alan Bainbridge, Manuel Jorge Cardoso, David Price, Ernest Cady, Giles S. Kendall, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2014	—	`conf`	Prefrontal Cortical Folding of the Preterm Brain: A Longitudinal Analysis of Preterm-Born Neonates. STIA Eliza Orasanu, Andrew Melbourne, Herve Lombaert, Manuel Jorge Cardoso, Stian Flage Johnsen, Giles S. Kendall, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2014	J	`jnl`	Preterm birth affects the developmental synergy between cortical folding and cortical connectivity observed on multimodal MRI. NeuroImage Andrew Melbourne, Giles S. Kendall, Manuel Jorge Cardoso, Roxanna Gunney, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2014	—	`conf`	SEEG Trajectory Planning: Combining Stability, Structure and Scale in Vessel Extraction. MICCAI (2) Maria A. Zuluaga, Roman Rodionov, Mark Nowell, Sufyan Achhala, Gergely Zombori, Manuel Jorge Cardoso, Anna Miserocchi, Andrew W. McEvoy, John S. Duncan, Sébastien Ourselin
2014	—	`conf`	Simulated Field Maps: Toward Improved Susceptibility Artefact Correction in Interventional MRI. IPCAI Martin Kochan, Pankaj Daga, Ninon Burgos, Mark White, Manuel Jorge Cardoso, Laura Mancini, Gavin Winston, Andrew W. McEvoy, John S. Thornton, Tarek A. Yousry, John S. Duncan, Danail Stoyanov, Sébastien Ourselin
2014	—	`conf`	Simulating Neurodegeneration through Longitudinal Population Analysis of Structural and Diffusion Weighted MRI Data. MICCAI (3) Marc Modat, Ivor J. A. Simpson, Manuel Jorge Cardoso, David M. Cash, Nicolas Toussaint, Nick C. Fox, Sébastien Ourselin
2013	—	`conf`	A Bayesian Approach for Spatially Adaptive Regularisation in Non-rigid Registration. MICCAI (2) Ivor J. A. Simpson, Mark William Woolrich, Manuel Jorge Cardoso, David M. Cash, Marc Modat, Julia A. Schnabel, Sébastien Ourselin
2013	J	`jnl`	AdaPT: An adaptive preterm segmentation algorithm for neonatal brain MRI. NeuroImage Manuel Jorge Cardoso, Andrew Melbourne, Giles S. Kendall, Marc Modat, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2013	J	`jnl`	An unbiased longitudinal analysis framework for tracking white matter changes using diffusion tensor imaging with application to Alzheimer's disease. NeuroImage Shiva Keihaninejad, Hui Zhang, Natalie S. Ryan, Ian B. Malone, Marc Modat, Manuel Jorge Cardoso, David M. Cash, Nick C. Fox, Sébastien Ourselin
2013	—	`conf`	Attenuation Correction Synthesis for Hybrid PET-MR Scanners. MICCAI (1) Ninon Burgos, Manuel Jorge Cardoso, Marc Modat, Stefano Pedemonte, John C. Dickson, Anna Barnes, John S. Duncan, David Atkinson, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2013	—	`conf`	Measurement of Myelin in the Preterm Brain: Multi-compartment Diffusion Imaging and Multi-component T2 Relaxometry. MICCAI (2) Andrew Melbourne, Zach Eaton-Rosen, Alan Bainbridge, Giles S. Kendall, Manuel Jorge Cardoso, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2013	—	`conf`	Multi-atlas Propagation Whole Heart Segmentation from MRI and CTA Using a Local Normalised Correlation Coefficient Criterion. FIMH Maria A. Zuluaga, Manuel Jorge Cardoso, Marc Modat, Sébastien Ourselin
2013	—	`conf`	Quantitative Airway Analysis in Longitudinal Studies Using Groupwise Registration and 4D Optimal Surfaces. MICCAI (2) Jens Petersen, Marc Modat, Manuel Jorge Cardoso, Asger Dirksen, Sébastien Ourselin, Marleen de Bruijne
2013	J	`jnl`	STEPS: Similarity and Truth Estimation for Propagated Segmentations and its application to hippocampal segmentation and brain parcelation. Medical Image Anal. Manuel Jorge Cardoso, Kelvin K. Leung, Marc Modat, Shiva Keihaninejad, David M. Cash, Josephine Barnes, Nick C. Fox, Sébastien Ourselin
2012	J	`jnl`	Accurate Localization of Optic Radiation During Neurosurgery in an Interventional MRI Suite. IEEE Trans. Medical Imaging Pankaj Daga, Gavin Winston, Marc Modat, Mark White, Laura Mancini, Manuel Jorge Cardoso, Mark R. Symms, Jason Stretton, Andrew W. McEvoy, John S. Thornton, Caroline Micallef, Tarek A. Yousry, David J. Hawkes, John S. Duncan, Sébastien Ourselin
2012	—	`conf`	Classification of Alzheimer's disease patients and controls with Gaussian processes. ISBI Jonathan Young, Marc Modat, Manuel Jorge Cardoso, John Ashburner, Sébastien Ourselin
2012	—	`conf`	Cortical Folding Analysis on Patients with Alzheimer's Disease and Mild Cognitive Impairment. MICCAI (3) David M. Cash, Andrew Melbourne, Marc Modat, Manuel Jorge Cardoso, Matthew J. Clarkson, Nick C. Fox, Sébastien Ourselin
2012	—	`conf`	Geodesic Information Flows. MICCAI (2) Manuel Jorge Cardoso, Robin Wolz, Marc Modat, Nick C. Fox, Daniel Rueckert, Sébastien Ourselin
2012	—	`conf`	Geodesic Shape-Based Averaging. MICCAI (3) Manuel Jorge Cardoso, Gavin Winston, Marc Modat, Shiva Keihaninejad, John S. Duncan, Sébastien Ourselin
2012	—	`conf`	Inverse-Consistent Symmetric Free Form Deformation. WBIR Marc Modat, Manuel Jorge Cardoso, Pankaj Daga, David M. Cash, Nick C. Fox, Sébastien Ourselin
2012	J	`jnl`	MRI to X-ray mammography registration using a volume-preserving affine transformation. Medical Image Anal. Thomy Mertzanidou, John H. Hipwell, Manuel Jorge Cardoso, Xiying Zhang, Christine Tanner, Sébastien Ourselin, Ulrich Bick, Henkjan J. Huisman, Nico Karssemeijer, David J. Hawkes
2012	—	`conf`	Multi-STEPS: Multi-label similarity and truth estimation for propagated segmentations. MMBIA Manuel Jorge Cardoso, Marc Modat, Sébastien Ourselin, Shiva Keihaninejad, David M. Cash
2012	—	`conf`	Parametric non-rigid registration using a stationary velocity field. MMBIA Marc Modat, Pankaj Daga, Manuel Jorge Cardoso, Sébastien Ourselin, Gerard R. Ridgway, John Ashburner
2012	—	`conf`	Radial Structure in the Preterm Cortex; Persistence of the Preterm Phenotype at Term Equivalent Age? MICCAI (3) Andrew Melbourne, Giles S. Kendall, Manuel Jorge Cardoso, Roxanna Gunney, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2012	—	`conf`	Steady-State Model of the Radio-Pharmaceutical Uptake for MR-PET. MICCAI (1) Stefano Pedemonte, Manuel Jorge Cardoso, Simon R. Arridge, Brian F. Hutton, Sébastien Ourselin
2011	J	`jnl`	A comparison of voxel and surface based cortical thickness estimation methods. NeuroImage Matthew J. Clarkson, Manuel Jorge Cardoso, Gerard R. Ridgway, Marc Modat, Kelvin K. Leung, Jonathan D. Rohrer, Nick C. Fox, Sébastien Ourselin
2011	—	`conf`	Adaptive Neonate Brain Segmentation. MICCAI (3) Manuel Jorge Cardoso, Andrew Melbourne, Giles S. Kendall, Marc Modat, Cornelia F. Hagmann, Nicola J. Robertson, Neil Marlow, Sébastien Ourselin
2011	—	`conf`	Cross-sectional analysis using voxel or surface based cortical thickness methods: A comparison study. ISBI Matthew J. Clarkson, Manuel Jorge Cardoso, Marc Modat, Gerard R. Ridgway, Kelvin K. Leung, Jonathan D. Rohrer, Nick C. Fox, Sébastien Ourselin
2011	—	`conf`	Improved Neuronavigation through Integration of Intraoperative Anatomical and Diffusion Images in an Interventional MRI Suite. IPCAI Pankaj Daga, Gavin Winston, Marc Modat, Manuel Jorge Cardoso, Mark White, Laura Mancini, Andrew W. McEvoy, John S. Thornton, Caroline Micallef, Tarek A. Yousry, David J. Hawkes, John S. Duncan, Sébastien Ourselin
2011	—	`conf`	Integrating structural and diffusion MR information for optic radiation localisation in focal epilepsy patients. ISBI Pankaj Daga, Gavin Winston, Marc Modat, Manuel Jorge Cardoso, Jason Stretton, Mark R. Symms, Andrew W. McEvoy, David J. Hawkes, John S. Duncan, Sébastien Ourselin
2011	J	`jnl`	LoAd: A locally adaptive cortical segmentation algorithm. NeuroImage Manuel Jorge Cardoso, Matthew J. Clarkson, Gerard R. Ridgway, Marc Modat, Nick C. Fox, Sébastien Ourselin
2011	B	`conf`	Log-Euclidean free-form deformation. Image Processing Marc Modat, Gerard R. Ridgway, Pankaj Daga, Manuel Jorge Cardoso, David J. Hawkes, John Ashburner, Sébastien Ourselin
2011	—	`conf`	Longitudinal Cortical Thickness Estimation Using Khalimsky's Cubic Complex. MICCAI (2) Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Sébastien Ourselin
2011	—	`conf`	On the Extraction of Topologically Correct Thickness Measurements Using Khalimsky's Cubic Complex. IPMI Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Sébastien Ourselin
2011	B	`conf`	Topologically correct cortical segmentation using Khalimsky's cubic complex framework. Image Processing Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Hugues Talbot, Michel Couprie, Sébastien Ourselin
2010	—	`conf`	Locally weighted Markov random fields for cortical segmentation. ISBI Manuel Jorge Cardoso, Matthew J. Clarkson, Marc Modat, Gerard R. Ridgway, Sébastien Ourselin
2010	—	`conf`	X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification. Digital Mammography / IWDM Thomy Mertzanidou, John H. Hipwell, Manuel Jorge Cardoso, Christine Tanner, Sébastien Ourselin, David J. Hawkes
2009	—	`conf`	Improved Maximum a Posteriori Cortical Segmentation by Iterative Relaxation of Priors. MICCAI (1) Manuel Jorge Cardoso, Matthew J. Clarkson, Gerard R. Ridgway, Marc Modat, Nick C. Fox, Sébastien Ourselin