Manuel A. Rivas

13 papers A 1Journal 12

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Efficient storage and regression computation for population-scale genome sequencing studies. Bioinform. Manuel A. Rivas, Christopher Chang
2024	J	`jnl`	Smiles2Dock: an open large-scale multi-task dataset for ML-based molecular docking. CoRR Thomas Le Menestrel, Manuel A. Rivas
2024	J	`jnl`	Using Pre-training and Interaction Modeling for ancestry-specific disease prediction in UK Biobank. CoRR Thomas Le Menestrel, Erin Craig, Robert Tibshirani, Trevor Hastie, Manuel A. Rivas
2021	A	`conf`	Efficient Computation and Analysis of Distributional Shapley Values. AISTATS Yongchan Kwon, Manuel A. Rivas, James Zou
2021	J	`jnl`	Fast numerical optimization for genome sequencing data in population biobanks. Bioinform. Ruilin Li, Christopher Chang, Yosuke Tanigawa, Balasubramanian Narasimhan, Trevor Hastie, Robert Tibshirani, Manuel A. Rivas
2021	J	`jnl`	Survival analysis on rare events using group-regularized multi-response Cox regression. Bioinform. Ruilin Li, Yosuke Tanigawa, Johanne M. Justesen, Jonathan Taylor, Trevor Hastie, Robert Tibshirani, Manuel A. Rivas
2020	J	`jnl`	Efficient computation and analysis of distributional Shapley values. CoRR Yongchan Kwon, Manuel A. Rivas, James Zou
2019	J	`jnl`	Global Biobank Engine: enabling genotype-phenotype browsing for biobank summary statistics. Bioinform. Gregory McInnes, Yosuke Tanigawa, Chris DeBoever, Adam Lavertu, Julia Eve Olivieri, Matthew Aguirre, Manuel A. Rivas
2018	J	`jnl`	DeepTag: inferring all-cause diagnoses from clinical notes in under-resourced medical domain. CoRR Allen Nie, Ashley Zehnder, Rodney López Page, Arturo L. Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou
2018	J	`jnl`	DeepTag: inferring diagnoses from veterinary clinical notes. npj Digit. Medicine Allen Nie, Ashley Zehnder, Rodney López Page, Yuhui Zhang, Arturo López Pineda, Manuel A. Rivas, Carlos D. Bustamante, James Zou
2017	J	`jnl`	biMM: efficient estimation of genetic variances and covariances for cohorts with high-dimensional phenotype measurements. Bioinform. Matti Pirinen, Christian Benner, Pekka Marttinen, Marjo-Riitta Järvelin, Manuel A. Rivas, Samuli Ripatti
2015	J	`jnl`	Assessing allele-specific expression across multiple tissues from RNA-seq read data. Bioinform. Matti Pirinen, Tuuli Lappalainen, Noah A. Zaitlen, Emmanouil T. Dermitzakis, Peter Donnelly, Mark I. McCarthy, Manuel A. Rivas
2013	J	`jnl`	Assessing association between protein truncating variants and quantitative traits. Bioinform. Manuel A. Rivas, Matti Pirinen, Matthew J. Neville, Kyle J. Gaulton, Loukas Moutsianas, Cecilia M. Lindgren, Fredrik Karpe, Mark I. McCarthy, Peter Donnelly