Manolis Maragkakis

15 papers B 1Journal 12Unranked 2
YearRankTypeTitle / Venue / Authors
2021 J jnl
SamQL: a structured query language and filtering tool for the SAM/BAM file format.
BMC Bioinform.
Christopher T. Lee, Manolis Maragkakis
2017 J jnl
bíogo: a simple high-performance bioinformatics toolkit for the Go language.
J. Open Source Softw.
R. Daniel Kortschak, Josh Bleecher Snyder, Manolis Maragkakis, David L. Adelson
2013 J jnl
DIANA-LncBase: experimentally verified and computationally predicted microRNA targets on long non-coding RNAs.
Nucleic Acids Res.
Maria D. Paraskevopoulou, Georgios K. Georgakilas, Nikos Kostoulas, Martin Reczko, Manolis Maragkakis, Theodore M. Dalamagas, Artemis G. Hatzigeorgiou
2012 J jnl
DIANA miRPath v.2.0: investigating the combinatorial effect of microRNAs in pathways.
Nucleic Acids Res.
Ioannis S. Vlachos, Nikos Kostoulas, Thanasis Vergoulis, Georgios K. Georgakilas, Martin Reczko, Manolis Maragkakis, Maria D. Paraskevopoulou, Kostantinos Prionidis, Theodore Dalamagas, Artemis G. Hatzigeorgiou
2012 J jnl
Functional microRNA targets in protein coding sequences.
Bioinform.
Martin Reczko, Manolis Maragkakis, Panagiotis Alexiou, Ivo Grosse, Artemis G. Hatzigeorgiou
2012 B conf
TARCLOUD: A Cloud-Based Platform to Support miRNA Target Prediction.
SSDBM
Thanasis Vergoulis, Michail Alexakis, Theodore Dalamagas, Manolis Maragkakis, Artemis G. Hatzigeorgiou, Timos K. Sellis
2012 J jnl
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental support.
Nucleic Acids Res.
Thanasis Vergoulis, Ioannis S. Vlachos, Panagiotis Alexiou, George Georgakilas, Manolis Maragkakis, Martin Reczko, Stefanos Gerangelos, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou
2011 J jnl
DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association.
Nucleic Acids Res.
Manolis Maragkakis, Thanasis Vergoulis, Panagiotis Alexiou, Martin Reczko, Kyriaki Plomaritou, Mixail Gousis, Kornilios Kourtis, Nectarios Koziris, Theodore Dalamagas, Artemis G. Hatzigeorgiou
2010 J jnl
FreePub: Collecting and Organizing Scientific Material Using Mindmaps
CoRR
Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou
2010 — conf
FreePub: Collecting and Organizing Scientific Material Using Mindmaps.
SWAT4LS
Theodore Dalamagas, Tryfon Farmakakis, Manolis Maragkakis, Artemis G. Hatzigeorgiou
2010 — conf
Predicting miRNA targets utilizing an Extended Profile HMM.
GCB
Jan Grau, Daniel Arend, Ivo Grosse, Artemis G. Hatzigeorgiou, Jens Keilwagen, Manolis Maragkakis, Claus Weinholdt, Stefan Posch
2009 J jnl
Accurate microRNA target prediction correlates with protein repression levels.
BMC Bioinform.
Manolis Maragkakis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Martin Reczko, Theodore Dalamagas, Giorgos Giannopoulos, George I. Goumas, Evangelos Koukis, Kornilios Kourtis, Victor A. Simossis, Praveen Sethupathy, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou
2009 J jnl
DIANA-microT web server: elucidating microRNA functions through target prediction.
Nucleic Acids Res.
Manolis Maragkakis, Martin Reczko, Victor A. Simossis, Panagiotis Alexiou, Giorgos L. Papadopoulos, Theodore Dalamagas, Giorgos Giannopoulos, Georgios I. Goumas, Evangelos Koukis, Kornilios Kourtis, Thanasis Vergoulis, Nectarios Koziris, Timos K. Sellis, Panayotis Tsanakas, Artemis G. Hatzigeorgiou
2009 J jnl
DIANA-mirPath: Integrating human and mouse microRNAs in pathways.
Bioinform.
Giorgos L. Papadopoulos, Panagiotis Alexiou, Manolis Maragkakis, Martin Reczko, Artemis G. Hatzigeorgiou
2009 J jnl
Lost in translation: an assessment and perspective for computational microRNA target identification.
Bioinform.
Panagiotis Alexiou, Manolis Maragkakis, Giorgos L. Papadopoulos, Martin Reczko, Artemis G. Hatzigeorgiou