Malgorzata Kotulska

17 papers Journal 13Unranked 4
YearRankTypeTitle / Venue / Authors
2023 J jnl
AmyloGraph: a comprehensive database of amyloid-amyloid interactions.
Nucleic Acids Res.
Michal Burdukiewicz, Dominik Rafacz, Agnieszka Barbach, Katarzyna Hubicka, Laura Bakala, Anna Lassota, Jakub Stecko, Natalia Szymanska, Jakub Wojciechowski, Dominika Kozakiewicz, Natalia Szulc, Jaroslaw Chilimoniuk, Izabela Jeskowiak, Marlena Gasior-Glogowska, Malgorzata Kotulska
2022 J jnl
Topological analysis as a tool for detection of abnormalities in protein-protein interaction data.
Bioinform.
Alicja W. Nowakowska, Malgorzata Kotulska
2018 J jnl
Bio-knowledge-based filters improve residue-residue contact prediction accuracy.
Bioinform.
Pawel P. Wozniak, J. Pelc, M. Skrzypecki, Gert Vriend, Malgorzata Kotulska
2017 J jnl
Correlated mutations select misfolded from properly folded proteins.
Bioinform.
Pawel P. Wozniak, Gert Vriend, Malgorzata Kotulska
2017 J jnl
Forecasting residue-residue contact prediction accuracy.
Bioinform.
Pawel P. Wozniak, Bogumil Konopka, J. Xu, Gert Vriend, Malgorzata Kotulska
2016 — conf
Database of Peptides Susceptible to Aggregation as a Tool for Studying Mechanisms of Diseases of Civilization.
ACIIDS (1)
Pawel P. Wozniak, Jean-Christophe Nebel, Malgorzata Kotulska
2015 J jnl
AmyLoad: website dedicated to amyloidogenic protein fragments.
Bioinform.
Pawel P. Wozniak, Malgorzata Kotulska
2015 — conf
Automated Analysis of Images from Confocal Laser Scanning Microscopy Applied to Observation of Calcium Channel Subunits in Nerve Cell Model Line Subjected Electroporation and Calcium.
ACIIDS (2)
Julita Kulbacka, Marek Kulbacki, Jakub Segen, Anna Choromanska, Jolanta Saczko, Magda Dubinska-Magiera, Malgorzata Kotulska
2014 J jnl
Evaluating the Significance of Protein Functional Similarity Based on Gene Ontology.
J. Comput. Biol.
Bogumil Konopka, Tomasz Golda, Malgorzata Kotulska
2014 J jnl
FISH Amyloid - a new method for finding amyloidogenic segments in proteins based on site specific co-occurence of aminoacids.
BMC Bioinform.
Pawel Gasior, Malgorzata Kotulska
2013 J jnl
Machine learning methods can replace 3D profile method in classification of amyloidogenic hexapeptides.
BMC Bioinform.
Jerzy Stanislawski, Malgorzata Kotulska, Olgierd Unold
2013 J jnl
On the amyloid datasets used for training PAFIG - how (not) to extend the experimental dataset of hexapeptides.
BMC Bioinform.
Malgorzata Kotulska, Olgierd Unold
2013 J jnl
Probabilistic grammatical model for helix-helix contact site classification.
Algorithms Mol. Biol.
Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska
2012 J jnl
Quality assessment of protein model-structures based on structural and functional similarities.
BMC Bioinform.
Bogumil Konopka, Jean-Christophe Nebel, Malgorzata Kotulska
2010 — conf
Towards 3D Modeling of Interacting TM Helix Pairs Based on Classification of Helix Pair Sequence.
PRIB
Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska
2009 — conf
Accuracy in Predicting Secondary Structure of Ionic Channels.
ICCCI (SCI Volume)
Bogumil Konopka, Witold Dyrka, Jean-Christophe Nebel, Malgorzata Kotulska
2008 J jnl
Ion flux through membrane channels - An enhanced algorithm for the Poisson-Nernst-Planck model.
J. Comput. Chem.
Witold Dyrka, Andy T. Augousti, Malgorzata Kotulska