Makiya Nakashima

14 papers B 1Journal 8Unranked 5
YearRankTypeTitle / Venue / Authors
2025 J jnl
J. Am. Medical Informatics Assoc.
Xiaotan Sun, Makiya Nakashima, Christopher Nguyen, Po-Hao Chen, W. H. Wilson Tang, Deborah Kwon, David Chen
2024 conf
ML4H@NeurIPS
Makiya Nakashima, Po-Hao Chen, Michael Bolen, Christopher Nguyen, W. H. Wilson Tang, Richard Grimm, Deborah Kwon, David Chen
2023 J jnl
IEEE Trans. Dependable Secur. Comput.
Wenjun Fan, Hsiang-Jen Hong, Jinoh Kim, Simeon Wuthier, Makiya Nakashima, Xiaobo Zhou, Ching-Hua Chow, Sang-Yoon Chang
2023 J jnl
CoRR
Jielin Qiu, Peide Huang, Makiya Nakashima, Jaehyun Lee, Jiacheng Zhu, W. H. Wilson Tang, Pohao Chen, Christopher Nguyen, Byung-Hak Kim, Debbie Kwon, Douglas Weber, Ding Zhao, David Chen
2023 conf
MLHC
Makiya Nakashima, Donna Salem, W. H. Wilson Tang, Christopher Nguyen, Tae-Hyun Hwang, Ding Zhao, Byung-Hak Kim, Deborah Kwon, David Chen
2022 J jnl
IEEE Trans. Netw. Serv. Manag.
Jinoh Kim, Makiya Nakashima, Wenjun Fan, Simeon Wuthier, Xiaobo Zhou, Ikkyun Kim, Sang-Yoon Chang
2022 J jnl
Digit. Commun. Networks
Brett Weinger, Jinoh Kim, Alex Sim, Makiya Nakashima, Nour Moustafa, K. John Wu
2022 J jnl
CoRR
Makiya Nakashima, Inyeop Jang, Ramesh Basnet, Mitchel Benovoy, W. H. Wilson Tang, Christopher Nguyen, Deborah Kwon, Tae-Hyun Hwang, David Chen
2021 B conf
LCN
Jinoh Kim, Makiya Nakashima, Wenjun Fan, Simeon Wuthier, Xiaobo Zhou, Ikkyun Kim, Sang-Yoon Chang
2021 conf
IEEE ICBC
Jinoh Kim, Makiya Nakashima, Wenjun Fan, Simeon Wuthier, Xiaobo Zhou, Ikkyun Kim, Sang-Yoon Chang
2021 J jnl
ACM Trans. Manag. Inf. Syst.
Makiya Nakashima, Alex Sim, Youngsoo Kim, Jonghyun Kim, Jinoh Kim
2020 conf
MSN
Brett Weinger, Jinoh Kim, Alex Sim, Makiya Nakashima, Nour Moustafa, K. John Wu
2020 conf
SNTA@HPDC
Makiya Nakashima, Alex Sim, Jinoh Kim
2019 J jnl
CoRR
Makiya Nakashima, Alex Sim, Youngsoo Kim, Jonghyun Kim, Jinoh Kim
s3-storage/s3_test.py
← Index s3-storage/s3_test.py python
#!/usr/bin/env python3
"""
Simple script to test S3 connectivity and download.
Usage: python s3_test.py
"""

import os
import time
import tempfile
from minio import Minio
from minio.error import S3Error
from dotenv import load_dotenv

# Load environment variables
load_dotenv()

def get_minio_client():
    """Create and return a Minio client using credentials from .env file"""
    endpoint = os.getenv("S3_ENDPOINT")
    access_key = os.getenv("S3_ACCESS_KEY")
    secret_key = os.getenv("S3_SECRET_KEY")
    secure = True 
    
    print(f"Connecting to S3 endpoint: {endpoint} (secure={secure})")
    
    return Minio(
        endpoint=endpoint,
        access_key=access_key,
        secret_key=secret_key,
        secure=secure
    )

def test_connection():
    """Test basic connectivity to S3"""
    try:
        client = get_minio_client()
        
        # Try to list buckets as a basic connectivity test
        buckets = client.list_buckets()
        print(f"Successfully connected to S3. Found {len(buckets)} buckets:")
        for bucket in buckets:
            print(f"  - {bucket.name}")
        
        return client
    except Exception as e:
        print(f"Failed to connect to S3: {e}")
        return None

def test_bucket_access(client, bucket_name):
    """Test access to a specific bucket"""
    try:
        exists = client.bucket_exists(bucket_name)
        if exists:
            print(f"Bucket '{bucket_name}' exists and is accessible")
            
            # List a few objects to verify access
            count = 0
            objects = []
            for obj in client.list_objects(bucket_name, recursive=True):
                print(f"  - {obj.object_name} ({obj.size} bytes)")
                objects.append(obj)
                count += 1
                if count >= 5:
                    break
            
            print(f"Found at least {len(objects)} objects in bucket")
            return objects
        else:
            print(f"Bucket '{bucket_name}' does not exist or is not accessible")
            return []
    except Exception as e:
        print(f"Error accessing bucket '{bucket_name}': {e}")
        return []

def test_download(client, bucket_name, object_name):
    """Test downloading a specific object"""
    try:
        print(f"Attempting to download: {object_name}")
        start_time = time.time()
        
        # Create a temporary file to store the downloaded object
        with tempfile.NamedTemporaryFile(delete=False) as temp_file:
            temp_path = temp_file.name
        
        # Download the object
        client.fget_object(bucket_name, object_name, temp_path)
        
        # Check if the file was downloaded successfully
        file_size = os.path.getsize(temp_path)
        elapsed_time = time.time() - start_time
        
        print(f"Download successful: {file_size} bytes in {elapsed_time:.2f} seconds")
        print(f"Average download speed: {file_size/elapsed_time/1024:.2f} KB/s")
        
        # Clean up
        os.unlink(temp_path)
        return True
    except S3Error as e:
        print(f"S3 Error during download: {e}")
        return False
    except Exception as e:
        print(f"Error downloading object: {e}")
        return False

def main():
    """Main function to run all tests"""
    print("=== S3 Connectivity Test ===")
    
    # Test basic connectivity
    client = test_connection()
    if not client:
        return
    
    # Get bucket name from environment variable
    bucket_name = "redb"
    print(f"\n=== Testing Access to Bucket: {bucket_name} ===")
    objects = test_bucket_access(client, bucket_name)
    
    if objects:
        # Test downloading the first object
        first_object = objects[0].object_name
        print(f"\n=== Testing Download of Object: {first_object} ===")
        test_download(client, bucket_name, first_object)
        
        # If the first one worked, let's try a specific file from the error log
        print(f"\n=== Testing Download of Specific Object ===")
        specific_object = "00/06/00062073114defac39cb7ab9cb99a0b77c535a09a241c60d47ddd0b6431629f1.zip"
        test_download(client, bucket_name, specific_object)

if __name__ == "__main__":
    main()