Makiko Suwa

15 papers B 1Journal 14
YearRankTypeTitle / Venue / Authors
2015 J jnl
Development of a Machine Learning Method to Predict Membrane Protein-Ligand Binding Residues Using Basic Sequence Information.
Adv. Bioinformatics
M. Xavier Suresh, M. Michael Gromiha, Makiko Suwa
2009 J jnl
TMFunction: database for functional residues in membrane proteins.
Nucleic Acids Res.
M. Michael Gromiha, Yukimitsu Yabuki, M. Xavier Suresh, A. Mary Thangakani, Makiko Suwa, Kazuhiko Fukui
2008 B conf
Neural network based prediction of protein structure and Function: Comparison with other machine learning methods.
IJCNN
M. Michael Gromiha, Shandar Ahmad, Makiko Suwa
2008 J jnl
TMBETADISC-RBF: Discrimination of beta-barrel membrane proteins using RBF networks and PSSM profiles.
Comput. Biol. Chem.
Yu-Yen Ou, M. Michael Gromiha, Shu-An Chen, Makiko Suwa
2007 J jnl
TMB Finding Pipeline: Novel Approach for Detecting β-Barrel Membrane Proteins in Genomic Sequences.
J. Chem. Inf. Model.
M. Michael Gromiha, Yukimitsu Yabuki, Makiko Suwa
2007 J jnl
TMBETA-GENOME: database for annotated ß-barrel membrane proteins in genomic sequences.
Nucleic Acids Res.
M. Michael Gromiha, Yukimitsu Yabuki, Srinesh Kundu, Sivasundaram Suharnan, Makiko Suwa
2006 J jnl
Automated classification of alternative splicing and transcriptional initiation and construction of visual database of classified patterns.
Bioinform.
Hideki Nagasaki, Masanori Arita, Tatsuya Nishizawa, Makiko Suwa, Osamu Gotoh
2005 J jnl
A simple statistical method for discriminating outer membrane proteins with better accuracy.
Bioinform.
M. Michael Gromiha, Makiko Suwa
2005 J jnl
Application of residue distribution along the sequence for discriminating outer membrane proteins.
Comput. Biol. Chem.
M. Michael Gromiha, Shandar Ahmad, Makiko Suwa
2005 J jnl
Discrimination of outer membrane proteins using support vector machines.
Bioinform.
Keun-Joon Park, M. Michael Gromiha, Paul Horton, Makiko Suwa
2005 J jnl
GRIFFIN: a system for predicting GPCR-G-protein coupling selectivity using a support vector machine and a hidden Markov model.
Nucleic Acids Res.
Yukimitsu Yabuki, Takahiko Muramatsu, Takatsugu Hirokawa, Hidehito Mukai, Makiko Suwa
2005 J jnl
TMBETA-NET: discrimination and prediction of membrane spanning ß-strands in outer membrane proteins.
Nucleic Acids Res.
M. Michael Gromiha, Shandar Ahmad, Makiko Suwa
2004 J jnl
GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known protein three-dimensional structures.
Bioinform.
Yukimitsu Yabuki, Yuri Mukai, Mark B. Swindells, Makiko Suwa
2004 J jnl
Neural network-based prediction of transmembrane -strand segments in outer membrane proteins.
J. Comput. Chem.
M. Michael Gromiha, Shandar Ahmad, Makiko Suwa
2001 J jnl
HUNT: launch of a full-length cDNA database from the Helix Research Institute.
Nucleic Acids Res.
Henrik T. Yudate, Makiko Suwa, Ryotaro Irie, Hiroshi Matsui, Tetsuo Nishikawa, Yoshitaka Nakamura, Daisuke Yamaguchi, Zhang Zhi Peng, Tomoyuki Yamamoto, Keiichi Nagai, Koji Hayashi, Tetsuji Otsuki, Tomoyasu Sugiyama, Toshio Ota, Yutaka Suzuki, Sumio Sugano, Takao Isogai, Yasuhiko Masuho