Magdalena Wysocka

17 papers Journal 14Unranked 3

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Accelerating Antibiotic Discovery with Large Language Models and Knowledge Graphs. ACL (6) Maxime Delmas, Magdalena Wysocka, Danilo Miranda Gusicuma, André Freitas
2025	J	`jnl`	Accelerating Antibiotic Discovery with Large Language Models and Knowledge Graphs. CoRR Maxime Delmas, Magdalena Wysocka, Danilo Miranda Gusicuma, André Freitas
2025	J	`jnl`	Biomedical reasoning in action: Multi-agent System for Auditable Biomedical Evidence Synthesis. CoRR Oskar Wysocki, Magdalena Wysocka, Mauricio Jacobo, Harriet Unsworth, André Freitas
2025	—	`conf`	SylloBio-NLI: Evaluating Large Language Models on Biomedical Syllogistic Reasoning. NAACL (Long Papers) Magdalena Wysocka, Danilo S. Carvalho, Oskar Wysocki, Marco Valentino, André Freitas
2024	—	`conf`	An LLM-based Knowledge Synthesis and Scientific Reasoning Framework for Biomedical Discovery. ACL (3) Oskar Wysocki, Magdalena Wysocka, Danilo S. Carvalho, Alex Bogatu, Danilo Miranda Gusicuma, Maxime Delmas, Harriet Unsworth, André Freitas
2024	J	`jnl`	An LLM-based Knowledge Synthesis and Scientific Reasoning Framework for Biomedical Discovery. CoRR Oskar Wysocki, Magdalena Wysocka, Danilo S. Carvalho, Alex Teodor Bogatu, Danilo Miranda Gusicuma, Maxime Delmas, Harriet Unsworth, André Freitas
2024	J	`jnl`	Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation. J. Biomed. Informatics Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel, André Freitas
2024	J	`jnl`	Relation Extraction in Underexplored Biomedical Domains: A Diversity-optimized Sampling and Synthetic Data Generation Approach. Comput. Linguistics Maxime Delmas, Magdalena Wysocka, André Freitas
2024	J	`jnl`	SylloBio-NLI: Evaluating Large Language Models on Biomedical Syllogistic Reasoning. CoRR Magdalena Wysocka, Danilo S. Carvalho, Oskar Wysocki, Marco Valentino, André Freitas
2023	J	`jnl`	A systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data. BMC Bioinform. Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas
2023	J	`jnl`	Large Language Models, scientific knowledge and factuality: A systematic analysis in antibiotic discovery. CoRR Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel, André Freitas
2023	J	`jnl`	Meta-analysis informed machine learning: Supporting cytokine storm detection during CAR-T cell Therapy. J. Biomed. Informatics Alex Bogatu, Magdalena Wysocka, Oskar Wysocki, Holly Butterworth, Manon Pillai, Jennifer Allison, Dónal Landers, Elaine Kilgour, Fiona Thistlethwaite, André Freitas
2023	J	`jnl`	Relation Extraction in underexplored biomedical domains: A diversity-optimised sampling and synthetic data generation approach. CoRR Maxime Delmas, Magdalena Wysocka, André Freitas
2023	J	`jnl`	Transformers and the Representation of Biomedical Background Knowledge. Comput. Linguistics Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Dónal Landers, André Freitas
2022	J	`jnl`	Biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data. CoRR Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, Dónal Landers, André Freitas
2022	J	`jnl`	Metareview-informed Explainable Cytokine Storm Detection during CAR-T cell Therapy. CoRR Alex Bogatu, Magdalena Wysocka, Oskar Wysocki, Holly Butterworth, Donal Landers, Elaine Kilgour, André Freitas
2022	J	`jnl`	Transformers and the representation of biomedical background knowledge. CoRR Oskar Wysocki, Zili Zhou, Paul O'Regan, Deborah Ferreira, Magdalena Wysocka, Donal Landers, André Freitas