Madalena Chaves

37 papers C 1Journal 18Unranked 16

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Benchmark for quantitative characterization of circadian clock cycles. Biosyst. Odile Burckard, Michèle Teboul, Franck Delaunay, Madalena Chaves
2023	J	`jnl`	Qualitative Control Strategies for Synchronization of Bistable Gene Regulatory Networks. IEEE Trans. Autom. Control. Nicolas Augier, Madalena Chaves, Jean-Luc Gouzé
2021	J	`jnl`	Special issue "International Symposium on Molecular Logic and Computational Synthetic Biology: MLCSB18". Soft Comput. Tomas Veloz, Madalena Chaves, Manuel António Martins
2020	—	`conf`	A model of apoptosis receptor reactions to study cell fate decision. MED Luis C. Gomes-Pereira, Madalena Chaves, Jérémie Roux
2020	J	`jnl`	Boolean dynamics revisited through feedback interconnections. Nat. Comput. Madalena Chaves, Daniel Figueiredo, Manuel A. Martins
2020	J	`jnl`	Cell cycle period control through modulation of clock inputs. J. Bioinform. Comput. Biol. Sofia Almeida, Madalena Chaves, Franck Delaunay
2020	—	`conf`	Core Models of Receptor Reactions to Evaluate Basic Pathway Designs Enabling Heterogeneous Commitments to Apoptosis. CMSB Marielle Péré, Madalena Chaves, Jérémie Roux
2020	—	`conf`	Qualitative Analysis of Mammalian Circadian Oscillations: Cycle Dynamics and Robustness. CMSB Ousmane Diop, Madalena Chaves, Laurent Tournier
2019	—	`conf`	Coupling and synchronization of piecewise linear genetic regulatory systems. CDC Madalena Chaves, Luca Scardovi, Eleni Firippi
2019	J	`jnl`	Dynamics of complex feedback architectures in metabolic pathways. Autom. Madalena Chaves, Diego A. Oyarzún
2019	—	`ed.`	Molecular Logic and Computational Synthetic Biology - First International Symposium, MLCSB 2018, Santiago, Chile, December 17-18, 2018, Revised Selected Papers MLCSB Madalena Chaves, Manuel A. Martins
2019	—	`conf`	rPrism - A Software for Reactive Weighted State Transition Models. HSB Daniel Figueiredo, Eugénio Rocha, Manuel António Martins, Madalena Chaves
2018	J	`jnl`	A Stability Result for Periodic Solutions of Nonmonotonic Smooth Negative Feedback Systems. SIAM J. Appl. Dyn. Syst. Camille Poignard, Madalena Chaves, Jean-Luc Gouzé
2016	J	`jnl`	Periodic Oscillations for Nonmonotonic Smooth Negative Feedback Circuits. SIAM J. Appl. Dyn. Syst. Camille Poignard, Madalena Chaves, Jean-Luc Gouzé
2015	J	`jnl`	Attractor computation using interconnected Boolean networks: Testing growth rate models in E. Coli. Theor. Comput. Sci. Madalena Chaves, Alfonso Carta
2015	J	`jnl`	Continuous-switch piecewise quadratic models of biological networks: Application to bacterial growth. Autom. Alfonso Carta, Madalena Chaves, Jean-Luc Gouzé
2013	—	`conf`	A Class of Switched Piecewise Quadratic Systems for Coupling Gene Expression with Growth Rate in Bacteria. NOLCOS Alfonso Carta, Madalena Chaves, Jean-Luc Gouzé
2013	—	`conf`	A linear reformulation of Boolean optimization problems and structure identification of gene regulation networks. CDC Christian Breindl, Madalena Chaves, Frank Allgöwer
2013	J	`jnl`	Interconnection of asynchronous Boolean networks, asymptotic and transient dynamics. Autom. Laurent Tournier, Madalena Chaves
2013	—	`book`	Predictive analysis of dynamical systems: combining discrete and continuous formalisms. Madalena Chaves
2012	—	`conf`	A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation. CMSB Alfonso Carta, Madalena Chaves, Jean-Luc Gouzé
2011	—	`conf`	An observer for a piecewise affine genetic network model with Boolean observations. CDC/ECC Xiao-Dong Li, Jean-Luc Gouzé, Madalena Chaves
2011	J	`jnl`	Exact control of genetic networks in a qualitative framework: The bistable switch example. Autom. Madalena Chaves, Jean-Luc Gouzé
2011	—	`conf`	Predicting the asymptotic dynamics of large biological networks by interconnections of Boolean modules. CDC/ECC Madalena Chaves, Laurent Tournier
2009	J	`jnl`	Live and let die - A systems biology view on cell death. Comput. Chem. Eng. Thomas Eissing, Madalena Chaves, Frank Allgöwer
2009	—	`conf`	Methods for qualitative analysis of genetic networks. ECC Madalena Chaves
2009	—	`conf`	Operational interactions in genetic networks: Application to an apoptosis signalling pathway. ECC Laurent Tournier, Madalena Chaves
2009	J	`jnl`	Shape, Size, and Robustness: Feasible Regions in the Parameter Space of Biochemical Networks. PLoS Comput. Biol. Adel Dayarian, Madalena Chaves, Eduardo D. Sontag, Anirvan M. Sengupta
2008	J	`jnl`	Bistable Biological Systems: A Characterization Through Local Compact Input-to-State Stability. IEEE Trans. Autom. Control. Madalena Chaves, Thomas Eissing, Frank Allgöwer
2006	J	`jnl`	Exact computation of amplification for a class of nonlinear systems arising from cellular signaling pathways. Autom. Eduardo D. Sontag, Madalena Chaves
2006	—	`conf`	Stability of Rate-Controlled Zero-Deficiency Networks. CDC Madalena Chaves
2006	—	`conf`	Structure and timescale analysis in genetic regulatory networks. CDC Madalena Chaves, Eduardo D. Sontag, Réka Albert
2005	J	`jnl`	Input-to-State Stability of Rate-Controlled Biochemical Networks. SIAM J. Control. Optim. Madalena Chaves
2004	—	`conf`	Gains and optimal design in signaling pathways. CDC Madalena Chaves, Eduardo D. Sontag, Robert J. Dinerstein
2003	C	`conf`	Vehicle networks: achieving regular formation. ACC Sonja Glavaski, Madalena Chaves, Robert Day, Parthasarathi Nag, Anca Williams, Wei Zhang
2002	J	`jnl`	State-estimators for Chemical Reaction Networks of Feinberg-Horn-Jackson Zero Deficiency Type. Eur. J. Control Madalena Chaves, Eduardo D. Sontag
2001	—	`conf`	Observers for chemical reaction networks. ECC Madalena Chaves, Eduardo D. Sontag