M. Khalid Khan Niazi

39 papers C 1Journal 10Unranked 27

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	H&E to Oncotype DX: Predicting recurrence risk in HR+/HER2- breast cancer. Expert Syst. Appl. Onur Can Koyun, Yongxin Guo, Ziyu Su, Hao Lu, Mostafa Rezapour, Robert Wesolowski, Gary Tozbikian, M. Khalid Khan Niazi, Metin N. Gurcan
2026	J	`jnl`	HistoMet: A Pan-Cancer Deep Learning Framework for Prognostic Prediction of Metastatic Progression and Site Tropism from Primary Tumor Histopathology. CoRR Yixin Chen, Ziyu Su, Lingbin Meng, Elshad Hasanov, Wei Chen, Anil Parwani, M. Khalid Khan Niazi
2025	J	`jnl`	BPMambaMIL: A bio-inspired prototype-guided multiple instance learning for oncotype DX risk assessment in histopathology. Comput. Methods Programs Biomed. Yongxin Guo, Ziyu Su, Onur Can Koyun, Hao Lu, Robert Wesolowski, Gary Tozbikian, M. Khalid Khan Niazi, Metin N. Gurcan
2024	J	`jnl`	Computational Pathology for Accurate Prediction of Breast Cancer Recurrence: Development and Validation of a Deep Learning-based Tool. CoRR Ziyu Su, Yongxin Guo, Robert Wesolowski, Gary Tozbikian, Nathaniel S. O'Connell, M. Khalid Khan Niazi, Metin N. Gurcan
2023	—	`conf`	Background detection affects downstream classification of Camelyon16 whole slide images. Digital and Computational Pathology Thomas E. Tavolara, M. Khalid Khan Niazi, Metin N. Gurcan
2023	—	`conf`	Deep learning to predict the proportion of positive cells in CMYC-stained tissue microarrays of diffuse large B-cell lymphoma. Digital and Computational Pathology Thomas E. Tavolara, M. Khalid Khan Niazi, David Jaye, Christopher Flowers, Lee Cooper, Metin N. Gurcan
2023	—	`conf`	Minimizing the intra-pathologist disagreement for tumor bud detection on H&E images using weakly supervised learning. Digital and Computational Pathology Thomas E. Tavolara, Wei Chen, Wendy L. Frankel, Metin N. Gurcan, M. Khalid Khan Niazi
2023	—	`conf`	Predicting obstructive sleep apnea severity from craniofacial images using ensemble machine learning models. Computer-Aided Diagnosis Ziyu Su, Sandhya Kumar, Thomas E. Tavolara, Metin N. Gurcan, Scott Segal, M. Khalid Khan Niazi
2023	—	`conf`	Simple patch-wise transformations serve as a mechanism for slide-level augmentation for multiple instance learning applications. Digital and Computational Pathology Thomas E. Tavolara, M. Khalid Khan Niazi, Metin N. Gurcan
2023	—	`conf`	The effects of sparsity induction methods on attention-based multiple instance learning applied to Camelyon16. Digital and Computational Pathology Thomas E. Tavolara, Metin N. Gurcan, M. Khalid Khan Niazi
2022	J	`jnl`	Attention2majority: Weak multiple instance learning for regenerative kidney grading on whole slide images. Medical Image Anal. Ziyu Su, Thomas E. Tavolara, Gabriel Carreno-Galeano, Sang Jin Lee, Metin N. Gurcan, M. Khalid Khan Niazi
2022	—	`conf`	Automatic generation of the ground truth for tumor budding using H&E stained slides. Digital and Computational Pathology Thomas E. Tavolara, Arijit Dutta, Martin V. Burks, Wei Chen, Wendy L. Frankel, Metin N. Gurcan, M. Khalid Khan Niazi
2022	J	`jnl`	OtoXNet - automated identification of eardrum diseases from otoscope videos: a deep learning study for video-representing images. Neural Comput. Appl. Hamidullah Binol, M. Khalid Khan Niazi, Charles Elmaraghy, Aaron C. Moberly, Metin N. Gurcan
2022	—	`conf`	Predicting HER2 scores from registered HER2 and H&E images. Digital and Computational Pathology Thomas E. Tavolara, M. Khalid Khan Niazi, Gary Tozbikian, Robert Wesolowski, Metin N. Gurcan
2021	—	`conf`	Bladder cancer organoid image analysis: textured-based grading. Digital Pathology Seda Camalan, M. Khalid Khan Niazi, Mahesh Devarasetty, Shay Soker, Metin N. Gurcan
2021	—	`conf`	Grading and localization of histological features for bioengineered kidney constructs. Digital Pathology Thomas E. Tavolara, Gabriel Carreno-Galeano, Metin N. Gurcan, Sang Jin Lee, M. Khalid Khan Niazi
2021	J	`jnl`	Identification of difficult to intubate patients from frontal face images using an ensemble of deep learning models. Comput. Biol. Medicine Thomas E. Tavolara, Metin N. Gurcan, Scott Segal, M. Khalid Khan Niazi
2021	—	`conf`	Identifying lung imaging biomarkers of BCG vaccination after infection with Mycobacterium tuberculosis. Digital Pathology Thomas E. Tavolara, M. Khalid Khan Niazi, Gillian Beamer, Metin N. Gurcan
2021	—	`conf`	Panoptic segmentation of wounds in a pig model. Computer-Aided Diagnosis Thomas E. Tavolara, Adam M. Jorgensen, Metin N. Gurcan, Sean V. Murphy, M. Khalid Khan Niazi
2020	—	`conf`	A multidimensional scaling and sample clustering to obtain a representative subset of training data for transfer learning-based rosacea lesion identification. Computer-Aided Diagnosis Hamidullah Binol, M. Khalid Khan Niazi, Alisha Plotner, Jennifer Sopkovich, Benjamin Kaffenberger, Metin N. Gurcan
2020	—	`conf`	Decision fusion on image analysis and tympanometry to detect eardrum abnormalities. Computer-Aided Diagnosis Hamidullah Binol, Aaron C. Moberly, M. Khalid Khan Niazi, Garth Essig, Jay Shah, Charles Elmaraghy, Theodoros Teknos, Nazhat Taj-Schaal, Lianbo Yu, Metin N. Gurcan
2019	J	`jnl`	Pathological image compression for big data image analysis: Application to hotspot detection in breast cancer. Artif. Intell. Medicine M. Khalid Khan Niazi, Yuzhang Lin, Feng Liu, Amit Ashok, Michael W. Marcellin, Gary Tozbikian, Metin Nafi Gürcan, Ali Bilgin
2019	—	`conf`	Segmentation of follicles from CD8-stained slides of follicular lymphoma using deep learning. Digital Pathology Çaglar Senaras, M. Khalid Khan Niazi, Vidya Arole, Weijie Chen, Berkman Sahiner, Arwa Shana'ah, Abner Louissaint, Robert Paul Hasserjian, Gerard Lozanski, Metin Nafi Gürcan
2018	—	`conf`	An application of transfer learning to neutrophil cluster detection for tuberculosis: efficient implementation with nonmetric multidimensional scaling and sampling. Digital Pathology M. Khalid Khan Niazi, Gillian Beamer, Metin N. Gurcan
2018	—	`conf`	Automated T1 bladder risk stratification based on depth of lamina propria invasion from H and E tissue biopsies: a deep learning approach. Digital Pathology M. Khalid Khan Niazi, Thomas E. Tavolara, Vidya Arole, Anil V. Parwani, Cheryl Lee, Metin N. Gurcan
2017	—	`conf`	A computational framework to detect normal and tuberculosis infected lung from H and E-stained whole slide images. Digital Pathology M. Khalid Khan Niazi, Gillian Beamer, Metin N. Gurcan
2017	J	`jnl`	Visually Meaningful Histopathological Features for Automatic Grading of Prostate Cancer. IEEE J. Biomed. Health Informatics M. Khalid Khan Niazi, Keluo Yao, Debra L. Zynger, Steven K. Clinton, James Chen, Mehmet Koyutürk, Thomas LaFramboise, Metin N. Gurcan
2016	—	`conf`	Computer-assisted bladder cancer grading: α-shapes for color space decomposition. Digital Pathology M. Khalid Khan Niazi, Anil V. Parwani, Metin N. Gurcan
2016	—	`conf`	Hotspot detection in pancreatic neuroendocrine tumors: density approximation by α-shape maps. Digital Pathology M. Khalid Khan Niazi, Douglas J. Hartman, Liron Pantanowitz, Metin N. Gurcan
2015	—	`conf`	Characterizing primary refractory neuroblastoma: prediction of outcome by microscopic image analysis. Digital Pathology M. Khalid Khan Niazi, Daniel A. Weiser, Bruce R. Pawel, Metin N. Gurcan
2014	—	`conf`	Grading vascularity from histopathological images based on traveling salesman distance and vessel size. Digital Pathology M. Khalid Khan Niazi, Jessica Hemminger, Habibe Kurt, Gerard Lozanski, Metin N. Gurcan
2014	—	`conf`	Hot spot detection for breast cancer in Ki-67 stained slides: image dependent filtering approach. Digital Pathology M. Khalid Khan Niazi, Erinn Downs-Kelly, Metin N. Gurcan
2013	—	`conf`	An automated method for counting cytotoxic T-cells from CD8 stained images of renal biopsies. Digital Pathology M. Khalid Khan Niazi, Anjali A. Satoskar, Metin N. Gurcan
2013	—	`conf`	Entropy based quantification of Ki-67 positive cell images and its evaluation by a reader study. Digital Pathology M. Khalid Khan Niazi, Michael Pennell, Camille Elkins, Jessica Hemminger, Ming Jin, Sean Kirby, Habibe Kurt, Barrie Miller, Elizabeth Plocharczyk, Rachel Roth, Rebecca Ziegler, Arwa Shana'ah, Fred Racke, Gerard Lozanski, Metin N. Gurcan
2011	—	`conf`	Bias field correction using grey-weighted distance transform applied on MR volumes. ISBI M. Khalid Khan Niazi, Ingela Nyström, Muhammad Talal Ibrahim, Ling Guan
2011	C	`conf`	Horizontal features based illumination normalization method for face recognition. ISPA Muhammad Talal Ibrahim, Ling Guan, M. Khalid Khan Niazi
2011	—	`—`	Image Filtering Methods for Biomedical Applications. M. Khalid Khan Niazi
2011	—	`conf`	Robust Signal Generation and Analysis of Rat Embryonic Heart Rate in Vitro Using Laplacian Eigenmaps and Empirical Mode Decomposition. CAIP (2) M. Khalid Khan Niazi, Muhammad Talal Ibrahim, Mats F. Nilsson, Anna-Carin Sköld, Ling Guan, Ingela Nyström
2006	J	`jnl`	Velocity-Image Model for Online Signature Verification. IEEE Trans. Image Process. Mohammad A. U. Khan, M. Khalid Khan Niazi, Muhammad Aurangzeb Khan