M. Gonzalo Claros

28 papers Journal 8Unranked 18
YearRankTypeTitle / Venue / Authors
2020 conf
IWBBIO
Elena Espinosa, Macarena Arroyo, Rafael Larrosa, Manuel Manchado, M. Gonzalo Claros, Rocío Bautista
2019 conf
IWBBIO (1)
José Córdoba-Caballero, Pedro Seoane-Zonjic, Manuel Manchado, M. Gonzalo Claros
2019 conf
IWBBIO (1)
Macarena Arroyo, Rafael Larrosa, M. Gonzalo Claros, Rocío Bautista
2019 conf
IWBBIO (1)
Elena Lima-Cabello, Isabel Martínez-Beas, Estefanía García-Quirós, Rosario Carmona, M. Gonzalo Claros, Jose Carlos Jimenez-Lopez, Juan de Dios Alché
2018 conf
IWBBIO (1)
Rafael Larrosa, Macarena Arroyo, Rocío Bautista, Carmen María López-Rodríguez, M. Gonzalo Claros
2018 J jnl
BMC Bioinform.
Pedro Seoane, Marina Espigares, Rosario Carmona, Álvaro Polonio, Julia Quintana, Enrico Cretazzo, Josefina Bota, Alejandro Pérez-García, Juan de Dios Alché, Luis Gómez, M. Gonzalo Claros
2017 conf
IWBBIO (2)
Estefanía García-Quirós, Rosario Carmona, Adoración Zafra, M. Gonzalo Claros, Juan de Dios Alché
2017 conf
IWBBIO (2)
Marina Espigares, Pedro Seoane, Rocío Bautista, Julia Quintana, Luis Gómez, M. Gonzalo Claros
2016 conf
IWBBIO
Rosario Carmona, Pedro Seoane, Adoración Zafra, María José Jiménez-Quesada, Juan de Dios Alché, M. Gonzalo Claros
2016 conf
IWBBIO
Adoración Zafra, José Carlos Jimenez-Lopez, Rosario Carmona, M. Gonzalo Claros, Juan de Dios Alché
2015 conf
IWBBIO (2)
David Velasco, Pedro Seoane, M. Gonzalo Claros
2015 conf
IWBBIO (2)
Isabel González Gayte, Rocío Bautista Moreno, M. Gonzalo Claros
2015 conf
IWBBIO (1)
María José Jiménez-Quesada, Jose Ángel Traverso, Adoración Zafra, Jose C. Jimenez-Lopez, Rosario Carmona, M. Gonzalo Claros, Juan D. Alché
2015 conf
IWBBIO (1)
Adoración Zafra, Rosario Carmona, Jose C. Jimenez-Lopez, Amada Pulido, M. Gonzalo Claros, Juan D. Alché
2014 J jnl
J. Biomed. Informatics
Rafael Marcos Luque Baena, Daniel Urda, M. Gonzalo Claros, Leonardo Franco, José M. Jerez
2013 conf
IWBBIO
Hicham Benzekri, Darío Guerrero-Fernández, Rocío Bautista, M. Gonzalo Claros
2013 conf
IWBBIO
Darío Guerrero-Fernández, Rafael Larrosa, M. Gonzalo Claros
2010 J jnl
Algorithms Mol. Biol.
Darío Guerrero-Fernández, Rocío Bautista, David P. Villalobos, Francisco R. Cantón, M. Gonzalo Claros
2010 conf
JBI
Noé Fernández-Pozo, Darío Guerrero-Fernández, Rocío Bautista, Josefa Gómez-Maldonado, Concepción Avila, Francisco M. Cánovas, M. Gonzalo Claros
2010 J jnl
Nucleic Acids Res.
Sergio Ramírez, Antonio Muñoz-Merida, Tor Johan Mikael Karlsson, Maximiliano García, Antonio J. Pérez-Pulido, M. Gonzalo Claros, Oswaldo Trelles
2010 J jnl
BMC Bioinform.
Juan Falgueras, Antonio J. Lara, Noé Fernández-Pozo, Francisco R. Cantón, Guillermo Pérez-Trabado, M. Gonzalo Claros
2009 conf
IWANN (2)
David Díaz, Sergio Gálvez, Juan Falgueras, Juan Antonio Caballero, Pilar Hernández, M. Gonzalo Claros, Gabriel Dorado
2009 conf
IWANN (1)
J. P. Florido, Héctor Pomares, Ignacio Rojas, José C. Calvo, José M. Urquiza, M. Gonzalo Claros
2009 J jnl
BMC Bioinform.
Victoria Martin-Requena, Antonio Muñoz-Merida, M. Gonzalo Claros, Oswaldo Trelles
2008 ch.
Innovations in Hybrid Intelligent Systems
Antonio J. Lara, Guillermo Pérez-Trabado, David P. Villalobos, Sara Díaz-Moreno, Francisco R. Cantón, M. Gonzalo Claros
2008 ch.
Innovations in Hybrid Intelligent Systems
Juan Falgueras, Antonio J. Lara, Francisco R. Cantón, Guillermo Pérez-Trabado, M. Gonzalo Claros
1995 J jnl
Comput. Appl. Biosci.
M. Gonzalo Claros
1994 J jnl
Comput. Appl. Biosci.
M. Gonzalo Claros, Gunnar von Heijne
redb/extractors/js_extractors/js_deobfuscation.py
← Index redb/extractors/js_extractors/js_deobfuscation.py python
import hashlib
import inspect
import re
from datetime import datetime, timezone
from typing import Any

from redb.extractors.enum import Tag
from redb.extractors.js_extractor import JSExtractor
from redb.extractors.js_extractors.js_patterns import PATTERNS

# String literals of 4+ characters; only used by the deobfuscation diff to count
# strings revealed after deobfuscation. Compiled once at module load.
_STRING_LITERAL_4PLUS_RE = re.compile(r"[\"\']([^\"\']{4,})[\"\']")


class JSDeobfuscationExtractor(JSExtractor):
    """Compute pre/post-deobfuscation metrics for a JS sample.

    The actual deobfuscation pass (external tool with jsbeautifier fallback)
    lives on `JSContext.deobfuscated` and is cached per sample, so any other
    extractor that needs the deobfuscated text reads the same value without
    re-running the subprocess. Configure the external tool via env vars:
        JS_DEOBFUSCATOR_PATH    Path or name (default: webcrack)
        JS_DEOBFUSCATE_TIMEOUT  Seconds (default: 60)
    """

    def __init__(
        self, filepath, log, exporters=None, index_prefix=None,
        known_benign=False, known_malicious=False, source=None, context=None,
    ):
        super().__init__(
            filepath, log, exporters, index_prefix,
            known_benign, known_malicious, source, context=context,
        )
        self.deobfuscation_result = None
        self.log.debug(inspect.currentframe().f_code.co_name)

    def tag(self):
        return Tag.JS_DEOBFUSCATION.value

    def extract(self):
        src = self.js_source
        if not src:
            return None

        deobfuscated, deobfuscator_used = self._context.deobfuscated
        if deobfuscated is None:
            return None

        original_size = len(src)
        original_entropy = self._context.text_entropy
        deobfuscated_size = len(deobfuscated)
        deobfuscated_entropy = self._calculate_text_entropy(deobfuscated)
        size_change_ratio = round(deobfuscated_size / original_size, 4) if original_size else 0.0

        # Strings revealed by deobfuscation: matched literals are extracted from
        # both versions and the set difference is the count of "new" strings.
        original_strings = set(_STRING_LITERAL_4PLUS_RE.findall(src))
        deobfuscated_strings = set(_STRING_LITERAL_4PLUS_RE.findall(deobfuscated))
        new_strings = deobfuscated_strings - original_strings

        # Suspicious APIs revealed by deobfuscation. Both sides of the diff
        # come from JSContext caches: the raw scan is computed once for the
        # whole pipeline; the deobfuscated scan is computed once and reused
        # by JSSuspiciousAPIsExtractor's revealed_by_deobf rows.
        original_apis = {n for n in self._context.scan if n in PATTERNS}
        deobfuscated_apis = set(self._context.scan_deobfuscated)
        new_apis = deobfuscated_apis - original_apis

        deobfuscated_sha256 = hashlib.sha256(deobfuscated.encode('utf-8')).hexdigest()

        self.deobfuscation_result = {
            'deobfuscator_used': deobfuscator_used,
            'deobfuscation_successful': True,
            'original_size': original_size,
            'deobfuscated_size': deobfuscated_size,
            'size_change_ratio': size_change_ratio,
            'original_entropy': original_entropy,
            'deobfuscated_entropy': deobfuscated_entropy,
            'new_strings_found': len(new_strings),
            'new_apis_found': len(new_apis),
            'deobfuscated_sha256': deobfuscated_sha256,
        }
        return self.deobfuscation_result

    def prepare_export_data(self, exporter_type: str) -> Any:
        if exporter_type == "ClickHouseExporter":
            if not self.deobfuscation_result:
                return None

            r = self.deobfuscation_result
            current_time = datetime.now(timezone.utc)
            data = [[
                self.sha256,
                r['deobfuscator_used'],
                int(r['deobfuscation_successful']),
                r['original_size'],
                r['deobfuscated_size'],
                r['size_change_ratio'],
                r['original_entropy'],
                r['deobfuscated_entropy'],
                r['new_strings_found'],
                r['new_apis_found'],
                r['deobfuscated_sha256'],
                current_time,
            ]]

            column_names = [
                "sha256", "deobfuscator_used", "deobfuscation_successful",
                "original_size", "deobfuscated_size", "size_change_ratio",
                "original_entropy", "deobfuscated_entropy",
                "new_strings_found", "new_apis_found",
                "deobfuscated_sha256", "analysis_date",
            ]

            column_type_names = [
                "FixedString(64)", "LowCardinality(String)", "UInt8",
                "UInt64", "UInt64", "Float64",
                "Float64", "Float64",
                "UInt32", "UInt32",
                "FixedString(64)", "DateTime64(3, 'UTC')",
            ]

            return (data, column_names, column_type_names)

    def get_clickhouse_table(self) -> str:
        return "redb_js_deobfuscation"