Lutz Brusch

18 papers A* 1Journal 15Unranked 2
YearRankTypeTitle / Venue / Authors
2025 A* conf
Deep Neural Cellular Potts Models.
ICML
Koen Minartz, Tim D'Hondt, Leon Hillmann, Jörn Starruß, Lutz Brusch, Vlado Menkovski
2025 J jnl
Deep Neural Cellular Potts Models.
CoRR
Koen Minartz, Tim D'Hondt, Leon Hillmann, Jörn Starruß, Lutz Brusch, Vlado Menkovski
2023 J jnl
Collective cell migration due to guidance-by-followers is robust to multiple stimuli.
Frontiers Appl. Math. Stat.
Robert Müller, Arthur Boutillon, Diego Jahn, Jörn Starruß, Nicolas B. David, Lutz Brusch
2023 J jnl
FitMultiCell: simulating and parameterizing computational models of multi-scale and multi-cellular processes.
Bioinform.
Emad Alamoudi, Yannik Schälte, Robert Müller, Jörn Starruß, Nils Bundgaard, Frederik Graw, Lutz Brusch, Jan Hasenauer
2022 J jnl
BioSimulators: a central registry of simulation engines and services for recommending specific tools.
CoRR
Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich, Akira Funahashi, Alan Garny, John H. Gennari, Padraig Gleeson, Anne Goelzer, Zachary B. Haiman, Joseph L. Hellerstein, Stefan Hoops, Jon C. Ison, Diego Jahn, Henry V. Jakubowski, Ryann Jordan, Matús Kalas, Matthias König, Wolfram Liebermeister, Synchon Mandal, Robert A. McDougal, J. Kyle Medley, Pedro Mendes, Robert Müller, Chris J. Myers, Aurélien Naldi, Tung V. N. Nguyen, David P. Nickerson, Brett G. Olivier, Drashti Patoliya, Loïc Paulevé, Linda R. Petzold, Ankita Priya, Anand K. Rampadarath, Johann M. Rohwer, Ali Sinan Saglam, Dilawar Singh, Ankur Sinha, Jacky L. Snoep, Hugh Sorby, Ryan K. Spangler, Jörn Starruß, Payton J. Thomas, David D. van Niekerk, Daniel Weindl, Fengkai Zhang, Anna Zhukova, Arthur P. Goldberg, Michael L. Blinov, Herbert M. Sauro, Ion I. Moraru, Jonathan R. Karr
2022 J jnl
BioSimulators: a central registry of simulation engines and services for recommending specific tools.
Nucleic Acids Res.
Bilal Shaikh, Lucian P. Smith, Dan Vasilescu, Gnaneswara Marupilla, Michael Wilson, Eran Agmon, Henry Agnew, Steven S. Andrews, Azraf Anwar, Moritz E. Beber, Frank T. Bergmann, David Brooks, Lutz Brusch, Laurence Calzone, Kiri Choi, Joshua Cooper, John Detloff, Brian Drawert, Michel Dumontier, G. Bard Ermentrout, James R. Faeder, Andrew P. Freiburger, Fabian Fröhlich, Akira Funahashi, Alan Garny, John H. Gennari, Padraig Gleeson, Anne Goelzer, Zachary B. Haiman, Jan Hasenauer, Joseph L. Hellerstein, Henning Hermjakob, Stefan Hoops, Jon C. Ison, Diego Jahn, Henry V. Jakubowski, Ryann Jordan, Matús Kalas, Matthias König, Wolfram Liebermeister, Rahuman S. Malik-Sheriff, Synchon Mandal, Robert A. McDougal, J. Kyle Medley, Pedro Mendes, Robert Müller, Chris J. Myers, Aurélien Naldi, Tung V. N. Nguyen, David P. Nickerson, Brett G. Olivier, Drashti Patoliya, Loïc Paulevé, Linda R. Petzold, Ankita Priya, Anand K. Rampadarath, Johann M. Rohwer, Ali Sinan Saglam, Dilawar Singh, Ankur Sinha, Jacky L. Snoep, Hugh Sorby, Ryan K. Spangler, Jörn Starruß, Payton J. Thomas, David D. van Niekerk, Daniel Weindl, Fengkai Zhang, Anna Zhukova, Arthur P. Goldberg, James C. Schaff, Michael L. Blinov, Herbert M. Sauro, Ion I. Moraru, Jonathan R. Karr
2021 J jnl
Correction: Quantification of nematic cell polarity in three-dimensional tissues.
PLoS Comput. Biol.
André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabian Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin M. Friedrich
2020 J jnl
A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to drug therapy timing and effectiveness.
PLoS Comput. Biol.
T. J. Sego, Josua Aponte-Serrano, Juliano Ferrari Gianlupi, Samuel R. Heaps, Kira Breithaupt, Lutz Brusch, Jessica R. Crawshaw, James M. Osborne, Ellen M. Quardokus, Richard K. Plemper, James A. Glazier
2020 J jnl
An Environment for Sustainable Research Software in Germany and Beyond: Current State, Open Challenges, and Call for Action.
CoRR
Hartwig Anzt, Felix Bach, Stephan Druskat, Frank Löffler, Axel Loewe, Bernhard Y. Renard, Gunnar Seemann, Alexander Struck, Elke Achhammer, Piush Aggarwal, Franziska Appel, Michael Bader, Lutz Brusch, Christian Busse, Gerasimos Chourdakis, Piotr Wojtek Dabrowski, Peter Ebert, Bernd Flemisch, Sven Friedl, Bernadette Fritzsch, Maximilian D. Funk, Volker Gast, Florian Goth, Jean-Noël Grad, Sibylle Hermann, Florian Hohmann, Stephan Janosch, Dominik Kutra, Jan Linxweiler, Thilo Muth, Wolfgang Peters-Kottig, Fabian Rack, Fabian H. C. Raters, Stephan Rave, Guido Reina, Malte Reißig, Timo Ropinski, Jörg Schaarschmidt, Heidi Seibold, Jan P. Thiele, Benjamin Uekermann, Stefan Unger, Rudolf Weeber
2020 J jnl
An environment for sustainable research software in Germany and beyond: current state, open challenges, and call for action.
F1000Research
Hartwig Anzt, Felix Bach, Stephan Druskat, Frank Löffler, Axel Loewe, Bernhard Y. Renard, Gunnar Seemann, Alexander Struck, Elke Achhammer, Piush Aggarwal, Franziska Appel, Michael Bader, Lutz Brusch, Christian Busse, Gerasimos Chourdakis, Piotr Wojciech Dabrowski, Peter Ebert, Bernd Flemisch, Sven Friedl, Bernadette Fritzsch, Maximilian D. Funk, Volker Gast, Florian Goth, Jean-Noël Grad, Sibylle Hermann, Florian Hohmann, Stephan Janosch, Dominik Kutra, Jan Linxweiler, Thilo Muth, Wolfgang Peters-Kottig, Fabian Rack, Fabian H. C. Raters, Stephan Rave, Guido Reina, Malte Reißig, Timo Ropinski, Jörg Schaarschmidt, Heidi Seibold, Jan P. Thiele, Benjamin Uekermann, Stefan Unger, Rudolf Weeber
2020 J jnl
Quantification of nematic cell polarity in three-dimensional tissues.
PLoS Comput. Biol.
André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabian Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial, Frank Jülicher, Benjamin M. Friedrich
2017 J jnl
pSSAlib: The partial-propensity stochastic chemical network simulator.
PLoS Comput. Biol.
Oleksandr Ostrenko, Pietro Incardona, Rajesh Ramaswamy, Lutz Brusch, Ivo F. Sbalzarini
2015 J jnl
Mathematical modelling of fluid transport and its regulation at multiple scales.
Biosyst.
Osvaldo Chara, Lutz Brusch
2014 J jnl
Morpheus: a user-friendly modeling environment for multiscale and multicellular systems biology.
Bioinform.
Jörn Starruß, Walter de Back, Lutz Brusch, Andreas Deutsch
2013 J jnl
Transdifferentiation of pancreatic cells by loss of contact-mediated signaling.
BMC Syst. Biol.
Walter de Back, Roland Zimm, Lutz Brusch
2010 J jnl
Prediction of traveling front behavior in a lattice-gas cellular automaton model for tumor invasion.
Comput. Math. Appl.
Haralambos Hatzikirou, Lutz Brusch, Carlo Schaller, Matthias Simon, Andreas Deutsch
2006 — conf
Towards in vivo computing: quantitative analysis of an artificial gene regulatory network behaving as a RS flip-flop and simulating the system in silico.
BIONETICS
Sikander Hayat, Kai Ostermann, Lutz Brusch, Wolfgang Pompe, Gerhard Rödel
2005 — conf
Design and Analysis of a Bio-inspired Search Algorithm for Peer to Peer Networks.
Self-star Properties in Complex Information Systems
Niloy Ganguly, Lutz Brusch, Andreas Deutsch