Luc Mottin

22 papers Misc 1Journal 8Unranked 13
YearRankTypeTitle / Venue / Authors
2025 — conf
TransBERT: A Framework for Synthetic Translation in Domain-Specific Language Modeling.
EMNLP (Findings)
Julien Knafou, Luc Mottin, Anaïs Mottaz, Alexandre Flament, Patrick Ruch
2024 — conf
Comparing Sequence-Based and Literature-Based Pathogenicity Scoring Methods for Human Variants.
MIE
Luc Mottin, Nona Naderi, Anaïs Mottaz, Pierre-André Michel, Lennart F. Johansson, Morris A. Swertz, Andrew Stubbs, Emilie Pasche, Julien Gobeill, Patrick Ruch
2024 — conf
SIB Text-Mining at TREC PLABA 2024.
TREC
Luc Mottin, Anaïs Mottaz, Julien Knafou, Alexandre Flament, Julien Gobeill, Patrick Ruch
2023 J jnl
COVoc and COVTriage: novel resources to support literature triage.
Bioinform.
Déborah Caucheteur, Zoë May Pendlington, Paola Roncaglia, Julien Gobeill, Luc Mottin, Nicolas Matentzoglu, Donat Agosti, David Osumi-Sutherland, Helen E. Parkinson, Patrick Ruch
2023 J jnl
Multilingual RECIST classification of radiology reports using supervised learning.
Frontiers Digit. Health
Luc Mottin, Jean-Philippe Goldman, Christoph Jäggli, Rita Achermann, Julien Gobeill, Julien Knafou, Julien Ehrsam, Alexandre Wicky, Camille L. Gerard, Tanja Schwenk, Mélinda Charrier, Petros Tsantoulis, Christian Lovis, Alexander B. Leichtle, Michael Kiessling, Olivier Michielin, Sylvain Pradervand, Vasiliki Foufi, Patrick Ruch
2022 — conf
Classification of Oncology Treatment Responses from French Radiology Reports with Supervised Machine Learning.
MIE
Jean-Philippe Goldman, Luc Mottin, Jamil Zaghir, Daniel Keszthelyi, Belinda Lokaj, Hugues Turbé, Julien Gobeill, Patrick Ruch, Julien Ehrsam, Christian Lovis
2022 Misc conf
Classification of oncology treatment responses from radiology reports with supervised machine learning.
AMIA
Luc Mottin, Jean-Philippe Goldman, Christoph Jäggli, Rita Achermann, Julien Gobeill, Julien Knafou, Julien Ehrsam, Alexandre Wicky, Camille L. Gerard, Tanja Schwenk, Mélinda Charrier, Petros Tsantoulis, Christian Lovis, Alexander B. Leichtle, Michael Kiessling, Olivier Michielin, Sylvain Pradervand, Vasiliki Foufi, Patrick Ruch
2022 — conf
Designing an Optimal Expansion Method to Improve the Recall of a Genomic Variant Curation-Support Service.
MIE
Anaïs Mottaz, Emilie Pasche, Pierre-André Michel, Luc Mottin, Douglas Teodoro, Patrick Ruch
2021 — conf
SIB Text Mining at TREC Clinical Trials 2021.
TREC
Déborah Caucheteur, Emilie Pasche, Luc Mottin, Anaïs Mottaz, Julien Gobeill, Patrick Ruch
2020 J jnl
SIB Literature Services: RESTful customizable search engines in biomedical literature, enriched with automatically mapped biomedical concepts.
Nucleic Acids Res.
Julien Gobeill, Déborah Caucheteur, Pierre-André Michel, Luc Mottin, Emilie Pasche, Patrick Ruch
2020 — conf
SIB Text Mining at TREC Precision Medicine 2020.
TREC
Emilie Pasche, Déborah Caucheteur, Luc Mottin, Anaïs Mottaz, Julien Gobeill, Patrick Ruch
2020 — conf
Text-Mining Services of the Swiss Variant Interpretation Platform for Oncology.
MIE
Déborah Caucheteur, Julien Gobeill, Anaïs Mottaz, Emilie Pasche, Pierre-André Michel, Luc Mottin, Daniel J. Stekhoven, Valérie Barbié, Patrick Ruch
2019 — conf
A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts.
CLEF (Working Notes)
Paul Van Rijen, Douglas Teodoro, Nona Naderi, Luc Mottin, Julien Knafou, Matt Jeffryes, Patrick Ruch
2019 — conf
Designing retrieval models to contrast precision-driven ad hoc search vs. recall-driven treatment extraction in Precision Medicine.
TREC
Déborah Caucheteur, Emilie Pasche, Julien Gobeill, Anaïs Mottaz, Luc Mottin, Patrick Ruch
2019 — conf
SIB Text Mining at TREC 2019 Deep Learning Track: Working Note.
TREC
Julien Knafou, Matt Jeffryes, Luc Mottin, Douglas Teodoro, Patrick Ruch
2018 J jnl
Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt.
Database J. Biol. Databases Curation
Aurore Britan, Isabelle Cusin, Valérie Hinard, Luc Mottin, Emilie Pasche, Julien Gobeill, Valentine Rech de Laval, Anne Gleizes, Daniel Dinis Teixeira, Pierre-André Michel, Patrick Ruch, Pascale Gaudet
2017 — conf
Customizing a Variant Annotation-Support Tool: an Inquiry into Probability Ranking Principles for TREC Precision Medicine.
TREC
Emilie Pasche, Julien Gobeill, Luc Mottin, Anaïs Mottaz, Douglas Teodoro, Paul Van Rijen, Patrick Ruch
2017 J jnl
Improving average ranking precision in user searches for biomedical research datasets.
Database J. Biol. Databases Curation
Douglas Teodoro, Luc Mottin, Julien Gobeill, Arnaud Gaudinat, Thérèse Vachon, Patrick Ruch
2017 J jnl
Improving average ranking precision in user searches for biomedical research datasets.
CoRR
Douglas Teodoro, Luc Mottin, Julien Gobeill, Arnaud Gaudinat, Thérèse Vachon, Patrick Ruch
2017 J jnl
Triage by ranking to support the curation of protein interactions.
Database J. Biol. Databases Curation
Luc Mottin, Emilie Pasche, Julien Gobeill, Valentine Rech de Laval, Anne Gleizes, Pierre-André Michel, Amos Bairoch, Pascale Gaudet, Patrick Ruch
2016 — conf
BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction.
CLEF (Working Notes)
Luc Mottin, Julien Gobeill, Anaïs Mottaz, Emilie Pasche, Arnaud Gaudinat, Patrick Ruch
2016 J jnl
neXtA
Database J. Biol. Databases Curation
Luc Mottin, Julien Gobeill, Emilie Pasche, Pierre-André Michel, Isabelle Cusin, Pascale Gaudet, Patrick Ruch