Lopamudra Giri

26 papers C 1Unranked 25

Year	Rank	Type	Title / Venue / Authors
2024	—	`conf`	Improved Segmentation of Confocal Calcium Videos of Hela Cells Using Deep-Learning-Assisted Watershed Algorithm. EMBC Satya Deepika Neelapala, Suman Gare, Vaibhav Dhyani, Dhruv Srikanth, Soumya Jana, Lopamudra Giri
2024	—	`conf`	Towards Fluorescent-Tag-Less Viral Titration: Automated Estimation of Cell-Size Distribution and Infection Level from Phase-Contrast Microscopy Using Deep Learning and Transfer Learning. EMBC Jagadeesh Mahadevan, Nishant Bogoria, Satya Deepika Neelapala, Dhruv Srikanth, Soumya Jana, Kishalay Mitra, Lopamudra Giri
2024	C	`conf`	U-Net-Based HeLa Cell Segmentation with Zero Manual Labeling Using DBSCAN-Generated Annotations. HealthCom Satya Deepika Neelapala, Soumya Jana, Lopamudra Giri
2023	—	`conf`	A deep learning approach for automation in neurite tracing and cell size estimation from differential contrast images under healthy and hypoxic condition. EMBC Debasmita Saha, Shrirang Hadule, Lopamudra Giri
2023	—	`conf`	Computational Framework for in Silico Analysis of Neural Hyperactivity and Loss of Neural Activity in a Population of Interconnected Neurons. NER Vaibhav Dhyani, KV Venkatesh, Lopamudra Giri
2023	—	`conf`	In vitro laser scanning confocal microscopy and unsupervised segmentation: Quantification of cytosolic calcium and RNA distribution in hypoxic neurons. EMBC Debasmita Saha, Vaibhav Dhyani, Lopamudra Giri
2023	—	`conf`	Microstate analysis of GABAB and mGluR Mediated Modulation of Calcium Spiking in Hippocampal Neurons. NER Dipanjan Sehanobish, Vaibhav Dhyani, Suman Gare, Kishalay Mitra, Lopamudra Giri
2022	—	`conf`	Analytics Pipeline for Visualization of Single Cell RNA Sequencing Data from Brochoaveolar Fluid in COVID-19 Patients: Assessment of Neuro Fuzzy-C-Means and HDBSCAN. EMBC Gare Suman, Soumita Chel, Priyanka Devi Pantula, Abha Saxena, Kishalay Mitra, Rahuldeb Sarkar, Lopamudra Giri
2021	—	`conf`	Gaussian Mixture Modeling of Single-Neuron Responses Obtained from Confocal-Calcium-Imaging of Dissociated Rat Hippocampal Neurons. NER Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
2021	—	`conf`	Heterogeneity in Neuronal Calcium Spike Trains based on Empirical Distance. NER Sathish Ande, Jayanth Reddy Regatti, Neha Pandey, Ajith Karunarathne, Lopamudra Giri, Soumya Jana
2021	—	`conf`	Mathematical modeling of viral infection dynamics and immune response in SARS-CoV-2: A computational framework for testing drug efficacy. EMBC Surbhi Sharma, Abha Saxena, Soumita Chel, Kishalay Mitra, Lopamudra Giri
2021	—	`conf`	Statistical Dependence between Neuronal Spike Train Pairs: Quantification based on Empirical Mutual Information Rate. BHI Sathish Ande, Srinivas Avasarala, Ajith Karunarathne, Lopamudra Giri, Soumya Jana
2020	—	`conf`	Application of kohonen-self organizing map to cluster drug induced Ca NCC Abha Saxena, Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
2020	—	`conf`	Confocal Imaging of Intercellular Calcium in HeLa Cells for Monitoring Drug-Response: Biophysical Framework for Visualization of the Time-Lapse Images. ISBI Gare Suman, Abha Saxena, Lopamudra Giri
2020	—	`conf`	Detection of Specific Templates in Calcium Spiking in HeLa Cells Using Hierarchical DBSCAN: Clustering and Visualization of CellDrug Interaction at Multiple Doses. EMBC Soumita Chel, Gare Suman, Lopamudra Giri
2020	—	`conf`	Synchronicity Identification in Hippocampal Neurons using Artificial Neural Network assisted Fuzzy C-means Clustering. SSCI Priyanka Devi Pantula, Srinivas Soumitri Miriyala, Lopamudra Giri, Kishalay Mitra
2019	—	`conf`	A model screening framework for the generation of Ca NER Vikas Upadhyay, Ravutla Surya Teja, Vaibhav Dhyani, Kevin George, Sarpras Swain, Kishalay Mitra, Lopamudra Giri
2019	—	`conf`	Automatic Identification of Mixed Retinal Cells in Time-Lapse Fluorescent Microscopy Images using High-Dimensional DBSCAN. EMBC Divya Spoorthy, Shanmukh Reddy Manne, Vaibhav Dhyani, Sarpras Swain, Shahna Shahulhameed, Siddhartha Mishra, Inderjeet Kaur, Lopamudra Giri, Soumya Jana
2019	—	`conf`	Cell-to-Cell Variability in Protein Expression during Viral Infection: Monte-Carlo Simulation and Validation based on Confocal Imaging. EMBC Abha Saxena, Vikas Upadhyay, Vaibhav Dhyani, Soumya Jana, Lopamudra Giri
2019	—	`conf`	Effect of topology and time window on probability distribution underlying baclofen induced Ca EMBC Abha Saxena, Vaibhav Dhyani, Gare Suman, Lopamudra Giri
2019	—	`conf`	Single Neuron Imaging Reveals Metabotropic Glutamate Receptor-Mediated Bursting and Delay in Calcium Oscillation in Hippocampal Neurons. EMBC Ranjana Singh, Abha Saxena, Lopamudra Giri
2018	—	`conf`	Confocal imaging of cytosolic Ca EMBC Sarpras Swain, Priyanka Devi Pantula, Kishalay Mitra, Lopamudra Giri
2018	—	`conf`	Smart Data Analytics approach to model Complex Biochemical Oscillations in Hippocampal Neurons. EMBC Srinivas Soumitri Miriyala, Priyanka Devi Pantula, Lopamudra Giri, Kishalay Mitra
2017	—	`conf`	Spatially resolved calcium spiking in hippocampal neurons: Estimation via confocal imaging and model-based simulation. NER Sarpras Swain, Sathish Ande, Ravutla Suryateja, Soumya Jana, Lopamudra Giri
2016	—	`conf`	Integrated quantification based on confocal imaging: Cell crowding modulates heterogeneity in GPCR-mediated calcium oscillation. EMBC Jophin G. Joseph, Sailaja Nanda, Sheetal Vennamalla, Govardhan Bhure, Ranjana Singh, Soumya Jana, Lopamudra Giri
2015	—	`conf`	Segmentation of neuron and measurement of optically programed neurite growth: Fast automation via Bayesian thresholding. NER Puneeth Reddy, Saurabh Shukla, Ajith Karunarathne, Soumya Jana, Lopamudra Giri