Lin Yuan

38 papers C 1Journal 16Unranked 21
YearRankTypeTitle / Venue / Authors
2026 J jnl
Correction: SpaMWGDA: Identifying spatial domains of spatial transcriptomes using multi-view weighted fusion graph convolutional network and data augmentation.
PLoS Comput. Biol.
Lin Yuan, Boyuan Meng, Qingxiang Wang, Chunyu Hu, Cuihong Wang, De-Shuang Huang
2026 J jnl
MFE-Former: Disentangling Emotion-Identity Dynamics via Self-Supervised Learning for Enhancing Speech-Driven Depression Detection.
IEEE J. Biomed. Health Informatics
Hao Wang, Jiayu Ye, Yanhong Yu, Lin Lu, Lin Yuan, Qingxiang Wang
2026 J jnl
SpaLSTF: Diffusion-based generative model with BiLSTM and XCA-Transformer for spatial transcriptomics imputation.
PLoS Comput. Biol.
Lin Yuan, Yufeng Jiang, Boyuan Meng, Qingxiang Wang, Cuihong Wang, De-Shuang Huang
2025 C conf
A Data Contribution-Based Adaptive Federated Learning Approach for Wearable Activity Recognition.
CSCWD
Yi Zhao, Chunyu Hu, Xiaodong Yang, Lin Yuan, Xiang Tian, Tianlei Gao, Yiqiang Chen
2025 J jnl
A brief survey of deep learning-based models for CircRNA-protein binding sites prediction.
Neurocomputing
Zhen Shen, Lin Yuan, Wenzheng Bao, Siguo Wang, Qinhu Zhang, De-Shuang Huang
2025 — conf
Aligning Histological Images and Spatial Gene Expression Profiles via Dynamic Convolution and Graph Transformers.
ICIC (26)
Yufeng Jiang, Mengkai Deng, Zizheng Li, Qingxiang Wang, Chunyu Hu, Yushui Geng, Zhujun Li, Lin Yuan
2025 — conf
SGAEMVN: A Hybrid Neighborhood-Based Graph Attention Autoencoder for Identifying Spatial Domains from Spatial Transcriptomics.
ICIC (26)
Boyuan Meng, Zhiting Xu, Lingyuan Yang, Qingxiang Wang, Chunyu Hu, Xingang Wang, Zhujun Li, Lin Yuan
2025 J jnl
SpaMWGDA: Identifying spatial domains of spatial transcriptomes using multi-view weighted fusion graph convolutional network and data augmentation.
PLoS Comput. Biol.
Lin Yuan, Boyuan Meng, Qingxiang Wang, Chunyu Hu, Cuihong Wang, De-Shuang Huang
2025 J jnl
scRGCL: a cell type annotation method for single-cell RNA-seq data using residual graph convolutional neural network with contrastive learning.
Briefings Bioinform.
Lin Yuan, Shengguo Sun, Yufeng Jiang, Qinhu Zhang, Lan Ye, Chun-Hou Zheng, De-Shuang Huang
2024 — conf
A New and Efficient IT Knowledge Exchange Platform.
ICAI (1)
Jinting Sha, Wendong Yu, Hongwei Wei, Lin Yuan, Zhujun Li
2024 — conf
Adaptive Weight Sampling and Graph Transformer Neural Network Framework for Cell Type Annotation of Scrna-seq Data.
ICIC (LNBI 2)
Lin Yuan, Shengguo Sun, Zhujun Li, Shoukang Zhang, Xingang Wang, Yushui Geng
2024 — conf
Cluster Analysis of Scrna-Seq Data Combining Bioinformatics with Graph Attention Autoencoders and Ensemble Clustering.
ICIC (LNBI 2)
Lin Yuan, Zhijie Xu, Zhujun Li, Shoukang Zhang, Chunyu Hu, Wendong Yu, Hongwei Wei, Xingang Wang, Yushui Geng
2024 — conf
Design and Implementation of Takeaway Ordering Recommendation System Based on Python and Flask.
ICAI (2)
Junjie Cao, Wendong Yu, Hongwei Wei, Lin Yuan, Zhujun Li
2024 J jnl
Identification of ferroptosis-related lncRNAs for predicting prognosis and immunotherapy response in non-small cell lung cancer.
Future Gener. Comput. Syst.
Lin Yuan, Shengguo Sun, Qinhu Zhang, Hai-Tao Li, Zhen Shen, Chunyu Hu, Xiaogang Zhao, Lan Ye, Chun-Hou Zheng, De-Shuang Huang
2024 — conf
LCKGCN: Identifying Potential Circrna-Disease Associations Based on Large Convolutional Kernel and Graph Convolutional Network.
ICIC (LNBI 2)
Yushu Zhang, Lin Yuan, Zhujun Li
2024 — conf
ScADSATGRN: An Adaptive Diffusion Structure-Aware Transformer Based Method Inferring Gene Regulatory Networks from Single-Cell Transcriptomic Data.
ICIC (LNBI 2)
Lin Yuan, Ling Zhao, Zhujun Li, Chunyu Hu, Shoukang Zhang, Xingang Wang, Yushui Geng
2024 J jnl
iCRBP-LKHA: Large convolutional kernel and hybrid channel-spatial attention for identifying circRNA-RBP interaction sites.
PLoS Comput. Biol.
Lin Yuan, Ling Zhao, Jinling Lai, Yufeng Jiang, Qinhu Zhang, Zhen Shen, Chun-Hou Zheng, De-Shuang Huang
2024 J jnl
scMGATGRN: a multiview graph attention network-based method for inferring gene regulatory networks from single-cell transcriptomic data.
Briefings Bioinform.
Lin Yuan, Ling Zhao, Yufeng Jiang, Zhen Shen, Qinhu Zhang, Ming Zhang, Chun-Hou Zheng, De-Shuang Huang
2023 — conf
A New and Efficient Dormitory Management System.
ICAI (2)
Boyuan Meng, Yushu Zhang, Zhujun Li, Wendong Yu, Hongwei Wei, Lin Yuan
2023 — conf
A Novel Method for Wearable Activity Recognition with Feature Evolvable Streams.
MobiQuitous (1)
Yixiao Wang, Chunyu Hu, Hong Liu, Lei Lyu, Lin Yuan
2023 — conf
An Improved Method for CFNet Identifying Glioma Cells.
ICIC (3)
Lin Yuan, Jinling Lai, Zhen Shen, Wendong Yu, Hongwei Wei, Ling Zhao, Zhijie Xu, Xingang Wang, Yushui Geng
2023 J jnl
FedIERF: Federated Incremental Extremely Random Forest for Wearable Health Monitoring.
J. Comput. Sci. Technol.
Chunyu Hu, Lisha Hu, Lin Yuan, Dianjie Lu, Lei Lyu, Yiqiang Chen
2023 — conf
Identification of CircRNA-Disease Associations from the Integration of Multi-dimensional Bioinformatics with Graph Auto-encoder and Attention Fusion Model.
ICIC (3)
Lin Yuan, Jiawang Zhao, Zhen Shen, Wendong Yu, Hongwei Wei, Shengguo Sun, Xingang Wang, Yushui Geng
2023 — conf
Tourist Attraction Recommendation System Based on Django and Collaborative Filtering.
ICAI (2)
Yufeng Jiang, Yushu Zhang, Zhujun Li, Wendong Yu, Hongwei Wei, Lin Yuan
2023 J jnl
iCircDA-NEAE: Accelerated attribute network embedding and dynamic convolutional autoencoder for circRNA-disease associations prediction.
PLoS Comput. Biol.
Lin Yuan, Jiawang Zhao, Zhen Shen, Qinhu Zhang, Yushui Geng, Chun-Hou Zheng, De-Shuang Huang
2022 — conf
Bio-ATT-CNN: A Novel Method for Identification of Glioblastoma.
ICIC (2)
Jinling Lai, Zhen Shen, Lin Yuan
2021 J jnl
A machine learning framework that integrates multi-omics data predicts cancer-related LncRNAs.
BMC Bioinform.
Lin Yuan, Jing Zhao, Tao Sun, Zhen Shen
2021 — conf
Deep Convolution Recurrent Neural Network for Predicting RNA-Protein Binding Preference in mRNA UTR Region.
ICIC (3)
Zhen Shen, Yanling Shao, Lin Yuan
2021 — conf
Joint Association Analysis Method to Predict Genes Related to Liver Cancer.
ICIC (3)
Lin Yuan, Zhen Shen
2019 J jnl
Integration of Multi-Omics Data for Gene Regulatory Network Inference and Application to Breast Cancer.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lin Yuan, Lehang Guo, Chang-An Yuan, Youhua Zhang, Kyungsook Han, Asoke K. Nandi, Barry Honig, De-Shuang Huang
2017 — conf
DSD-SVMs: Human Promoter Recognition Based on Multiple Deep Divergence Features.
ICIC (1)
Wenxuan Xu, Wenzheng Bao, Lin Yuan, Zhichao Jiang
2017 J jnl
FAACOSE: A Fast Adaptive Ant Colony Optimization Algorithm for Detecting SNP Epistasis.
Complex.
Lin Yuan, Chang-An Yuan, De-Shuang Huang
2017 — conf
MD-MSVMs: A Human Promoter Recognition Method Based on Single Nucleotide Statistics and Multilayer Decision.
ICIC (1)
Wenxuan Xu, Wenzheng Bao, Lin Yuan, Zhichao Jiang
2017 J jnl
Nonconvex Penalty Based Low-Rank Representation and Sparse Regression for eQTL Mapping.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lin Yuan, Lin Zhu, Wei-Li Guo, Xiaobo Zhou, Youhua Zhang, Zhenhua Huang, De-Shuang Huang
2016 — conf
Novel Algorithm for Multiple Quantitative Trait Loci Mapping by Using Bayesian Variable Selection Regression.
ICIC (3)
Lin Yuan, Kyungsook Han, De-Shuang Huang
2014 J jnl
Gene differential coexpression analysis based on biweight correlation and maximum clique.
BMC Bioinform.
Chun-Hou Zheng, Lin Yuan, Wen Sha, Zhan-Li Sun
2013 — conf
Biweight Midcorrelation-Based Gene Differential Coexpression Analysis and Its Application to Type II Diabetes.
ICIC (3)
Lin Yuan, Wen Sha, Zhan-Li Sun, Chun-Hou Zheng
2013 — conf
Differential coexpression analysis in gene modules level and its application to type 2 diabetes.
BIBM
Lin Yuan, Wen Sha, Jun Zhang, Chun-Hou Zheng, Junfeng Xia