Liming Cai

88 papers A* 1A 2B 3C 6Misc 5Journal 49Unranked 22
YearRankTypeTitle / Venue / Authors
2026 J jnl
How to block the reinvasion of mosquito populations using the sterile insect technique? Insights from modelling strategic barrier.
J. Appl. Math. Comput.
Xixia Ma, Zhimin Li, Liming Cai
2025 J jnl
Backward Bifurcation of an Age-Structured Epidemic Model with Partial Immunity.
Int. J. Bifurc. Chaos
Liming Cai, Mingrui Lei, Jin Wang
2025 — conf
Cancer Diseases Classification with Sparse Neural Networks: An Information-Theoretic Approach.
ICCABS
Zahra Jandaghi, Sixiang Zhang, Xiuzhen Huang, Liming Cai
2025 — conf
Leveraging RNA LLMs for 3D Structure Prediction via Data Augmentation.
ICCABS
Sixiang Zhang, Harish Anand, Liming Cai
2024 — conf
A Study on the Implementation and Impact of Basic Electrical Skills Training: University-Wide General Education Course.
ICEED
Liming Cai, Samee Ur Rehman, Xuan Wang, Rahat Ali, Xi Gong, Lianmei Zhang, Jinsong Tao
2024 — conf
Associating Endpoint Accuracy and Similarity of Muscle Synergies.
BIOSTEC (1)
Liming Cai, Shuhao Yan, Chuanyun Ouyang, Tianxiang Zhang, Jun Zhu, Li Chen, Hui Liu
2024 J jnl
Bifurcation analysis of an algal blooms dynamical model in trophic interaction.
J. Appl. Math. Comput.
Qian Wei, Liming Cai
2024 J jnl
Modeling the impact of directional movement on mosquito population suppress.
Appl. Math. Lett.
Xixia Ma, Liming Cai
2024 J jnl
Polynomial-time derivation of optimal k-tree topology from Markov networks.
CoRR
Fereshteh R. Dastjerdi, Liming Cai
2024 J jnl
α-HMM: A Graphical Model for RNA Folding.
CoRR
Sixiang Zhang, Aaron J. Yang, Liming Cai
2023 J jnl
An improved wavelet threshold denoising approach for surface electromyography signal.
EURASIP J. Adv. Signal Process.
Chuanyun Ouyang, Liming Cai, Bin Liu, Tianxiang Zhang
2023 J jnl
Classification and Analysis of Human Body Movement Characteristics Associated with Acrophobia Induced by Virtual Reality Scenes of Heights.
Sensors
Xiankai Cheng, Benkun Bao, Weidong Cui, Shuai Liu, Jun Zhong, Liming Cai, Hongbo Yang
2023 J jnl
Global dynamics of a vector-borne disease model with direct transmission and differential susceptibility.
J. Appl. Math. Comput.
Xiaoguang Li, Xuan Zou, Liming Cai, Yuming Chen
2022 J jnl
Efficient Summary Reuse for Software Regression Verification.
IEEE Trans. Software Eng.
Fei He, Qianshan Yu, Liming Cai
2022 J jnl
Gated Recurrent Unit Network for Psychological Stress Classification Using Electrocardiograms from Wearable Devices.
Sensors
Jun Zhong, Yongfeng Liu, Xiankai Cheng, Liming Cai, Weidong Cui, Dong Hai
2022 J jnl
SPNet: Siamese-Prototype Network for Few-Shot Remote Sensing Image Scene Classification.
IEEE Trans. Geosci. Remote. Sens.
Gong Cheng, Liming Cai, Chunbo Lang, Xiwen Yao, Jinyong Chen, Lei Guo, Junwei Han
2021 — conf
Development of A Low-Inertia 5-DOF Hybrid Manipulator for Moxibustion.
ICAR
ZhiSen Wang, Juzhong Zhang, Yuyi Chu, Qing Zha, Liming Cai, Tingfeng Ye, Yuanyuan Qin, Hongli Dong, Hongbo Yang
2021 J jnl
Human MicroRNA Target Prediction via Multi-Hypotheses Learning.
J. Comput. Biol.
Mohammad Mohebbi, Liang Ding, Russell L. Malmberg, Liming Cai
2020 J jnl
Modeling and analyzing cholera transmission dynamics with vaccination age.
J. Frankl. Inst.
Liming Cai, Gaoxu Fan, Chayu Yang, Jin Wang
2020 — conf
On Graph Learning with Neural Networks.
LOD (2)
Zahra Jandaghi, Liming Cai
2019 — conf
A Multi-hypothesis Learning Algorithm for Human and Mouse miRNA Target Prediction.
ICCABS
Mohammad Mohebbi, Liang Ding, Russell L. Malmberg, Liming Cai
2019 — conf
Non-local Recoloring Algorithm for Color Vision Deficiencies with Naturalness and Detail Preserving.
IFTC
Yunlu Wang, Duo Li, Menghan Hu, Liming Cai
2018 J jnl
Accurate prediction of human miRNA targets via graph modeling of the miRNA-target duplex.
J. Bioinform. Comput. Biol.
Mohammad Mohebbi, Liang Ding, Russell L. Malmberg, Cory Momany, Khaled Rasheed, Liming Cai
2018 J jnl
Efficient Learning of Optimal Markov Network Topology with k-Tree Modeling.
CoRR
Liang Ding, Di Chang, Russell L. Malmberg, Aaron Martínez, David Robinson, Matthew Wicker, Hongfei Yan, Liming Cai
2018 J jnl
When Regression Verification Meets CEGAR.
CoRR
Fei He, Qianshan Yu, Liming Cai
2016 J jnl
A New Graph Theoretic Approach for Protein Threading.
Fundam. Informaticae
Yinglei Song, Junfeng Qu, Ying Xu, Liming Cai
2016 — conf
Accurate prediction of human miRNA targets via graph modeling of miRNA-target duplex.
ICCABS
Mohammad Mohebbi, Liang Ding, Russell L. Malmberg, Cory Momany, Khaled Rasheed, Liming Cai
2016 — conf
Genome-wide identification and evolutionary analysis of long non-coding RNAs in cereals.
ICCABS
Ying Sun, Willie L. Rogers, Katrien M. Devos, Liming Cai, Russell L. Malmberg
2015 J jnl
Accurate prediction of RNA nucleotide interactions with backbone
Bioinform.
Liang Ding, Xingran Xue, Sal LaMarca, Mohammad Mohebbi, Abdul Samad, Russell L. Malmberg, Liming Cai
2015 J jnl
Big data - a 21st century science Maginot Line? No-boundary thinking: shifting from the big data paradigm.
BioData Min.
Xiuzhen Huang, Steven F. Jennings, Barry Bruce, Alison Buchan, Liming Cai, Pengyin Chen, Carole L. Cramer, Weihua Guan, Uwe Hilgert, Hongmei Jiang, Zenglu Li, Gail McClure, Donald F. McMullen, Bindu Nanduri, Andy D. Perkins, Bhanu Rekepalli, Saeed Salem, Jennifer Specker, Karl Walker, Donald C. Wunsch, Donghai Xiong, Shuzhong Zhang, Yu Zhang, Zhongming Zhao, Jason H. Moore
2014 — conf
Ab initio Prediction of RNA Nucleotide Interactions with Backbone
CMSR@ECCB
Liang Ding, Xingran Xue, Sal LaMarca, Mohammad Mohebbi, Abdul Samad, Russell L. Malmberg, Liming Cai
2014 J jnl
Analysis of an extended HIV/AIDS epidemic model with treatment.
Appl. Math. Comput.
Liming Cai, Shuli Guo, Shuping Wang
2014 J jnl
Dynamics of Mosquitoes Populations with Different Strategies for Releasing Sterile Mosquitoes.
SIAM J. Appl. Math.
Liming Cai, Shangbing Ai, Jia Li
2014 C conf
Stochastic k-Tree Grammar and Its Application in Biomolecular Structure Modeling.
LATA
Liang Ding, Abdul Samad, Xingran Xue, Xiuzhen Huang, Russell L. Malmberg, Liming Cai
2013 — conf
Patterns of Chromatin-Modifications Discriminate Different Genomic Features in
ISBRA
Anuj Srivastava, Xiaoyu Zhang, Sal LaMarca, Liming Cai, Russell L. Malmberg
2013 J jnl
Polynomial kernels collapse the W-hierarchy.
CoRR
Liang Ding, Abdul Samad, Xingran Xue, Xiuzhen Huang, Liming Cai
2013 — conf
Protein Closed Loop Prediction from Contact Probabilities.
ISBRA
Liang Ding, Joseph Robertson, Russell L. Malmberg, Liming Cai
2012 J jnl
Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds.
BMC Bioinform.
Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I. Shaw, Ying-Wai Li, Russell L. Malmberg, Liming Cai
2012 J jnl
TRFolder-W: a web server for telomerase RNA structure prediction in yeast genomes.
Bioinform.
Dong Zhang, Xingran Xue, Russell L. Malmberg, Liming Cai
2011 J jnl
Analyzing Modular RNA Structure reveals Low Global Structural Entropy in microRNA Sequence.
J. Bioinform. Comput. Biol.
Timothy I. Shaw, Amir Manzour, Yingfeng Wang, Russell L. Malmberg, Liming Cai
2011 — conf
Simultaneous Prediction of RNA Secondary Structure and Helix Coaxial Stacking.
BIBM
Pooya Shareghi, Yingfeng Wang, Russell L. Malmberg, Liming Cai
2011 — conf
Stable stem enabled shannon entropies distinguish non-coding RNAs from random backgrounds.
ICCABS
Yingfeng Wang, Amir Manzour, Pooya Shareghi, Timothy I. Shaw, Ying-Wai Li, Russell L. Malmberg, Liming Cai
2011 J jnl
TRFolder: computational prediction of novel telomerase RNA structures in yeast genomes.
Int. J. Bioinform. Res. Appl.
Leilei Guo, Dong Zhang, Yingfeng Wang, Russell L. Malmberg, Michael J. McEachern, Liming Cai
2010 J jnl
Fixed-Parameter Approximation: Conceptual Framework and Approximability Results.
Algorithmica
Liming Cai, Xiuzhen Huang
2010 J jnl
RNApasta: a tool for analysis of RNA structural alignments.
Int. J. Bioinform. Res. Appl.
Russell L. Malmberg, Timothy I. Shaw, Liming Cai
2009 J jnl
RNATOPS-W: a web server for RNA structure searches of genomes.
Bioinform.
Yingfeng Wang, Zhibin Huang, Yong Wu, Russell L. Malmberg, Liming Cai
2008 J jnl
Fast and accurate search for non-coding RNA pseudoknot structures in genomes.
Bioinform.
Zhibin Huang, Yong Wu, Joseph Robertson, Liang Feng, Russell L. Malmberg, Liming Cai
2008 J jnl
Parameterized Complexity and Biopolymer Sequence Comparison.
Comput. J.
Liming Cai, Xiuzhen Huang, Chunmei Liu, Frances A. Rosamond, Yinglei Song
2007 Misc conf
Comparative Pathway Annotation with Protein-DNA Interaction and Operon Information via Graph Tree Decomposition.
Pacific Symposium on Biocomputing
Jizhen Zhao, Dongsheng Che, Liming Cai
2007 — conf
Comparative Pathway Prediction Via Unified Graph Modeling of Genomic Structure Information.
ISBRA
Jizhen Zhao, Dongsheng Che, Liming Cai
2007 C conf
Operon Prediction in Microbial Genomes Using Decision Tree Approach.
CIBCB
Dongsheng Che, Jizhen Zhao, Liming Cai, Ying Xu
2007 J jnl
The Complexity of Polynomial-Time Approximation.
Theory Comput. Syst.
Liming Cai, Michael R. Fellows, David W. Juedes, Frances A. Rosamond
2006 J jnl
Efficient Parameterized Algorithms for Biopolymer Structure-Sequence Alignment.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
2006 Misc conf
Fast De novo Peptide Sequencing and Spectral Alignment via Tree Decomposition.
Pacific Symposium on Biocomputing
Chunmei Liu, Yinglei Song, Bo Yan, Ying Xu, Liming Cai
2006 — conf
Fixed-Parameter Approximation: Conceptual Framework and Approximability Results.
IWPEC
Liming Cai, Xiuzhen Huang
2006 Misc conf
Learning the Parameters of Stochastic Grammar Models for RNA Structures with Pseudoknots.
GrC
Jizhen Zhao, Liming Cai, Russell L. Malmberg
2006 J jnl
Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots.
Int. J. Bioinform. Res. Appl.
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Congzhou He, Liming Cai
2006 — conf
Peptide sequence tag-based blind identification of post-translational modifications with point process model.
ISMB (Supplement of Bioinformatics)
Chunmei Liu, Bo Yan, Yinglei Song, Ying Xu, Liming Cai
2006 C conf
Phylogenetic Network Inferences Through Efficient Haplotyping.
WABI
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Liming Cai
2006 C conf
Rapid
WABI
Jizhen Zhao, Russell L. Malmberg, Liming Cai
2005 J jnl
BEST: Binding-site Estimation Suite of Tools.
Bioinform.
Dongsheng Che, Shane T. Jensen, Liming Cai, Jun S. Liu
2005 C conf
Efficient Parameterized Algorithm for Biopolymer Structure-Sequence Alignment.
WABI
Yinglei Song, Chunmei Liu, Xiuzhen Huang, Russell L. Malmberg, Ying Xu, Liming Cai
2005 J jnl
Preface.
J. Comput. Sci. Technol.
Ying Xu, Liming Cai, Zhiping Weng
2005 Misc conf
Profiling and Searching for RNA Pseudoknot Structures in Genomes.
International Conference on Computational Science (2)
Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
2005 J jnl
Profiling and Searching for RNA Pseudoknot Structures in Genomes.
Trans. Comp. Sys. Biology
Chunmei Liu, Yinglei Song, Russell L. Malmberg, Liming Cai
2005 J jnl
RNA Structural Homology Search with a Succinct Stochastic Grammar Model.
J. Comput. Sci. Technol.
Yinglei Song, Jizhen Zhao, Chunmei Liu, Kan Liu, Russell L. Malmberg, Liming Cai
2005 — conf
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes.
CSB
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fangfang Pan, Liming Cai
2003 J jnl
On the existence of subexponential parameterized algorithms.
J. Comput. Syst. Sci.
Liming Cai, David W. Juedes
2003 — conf
Stochastic modeling of RNA pseudoknotted structures: a grammatical approach.
ISMB (Supplement of Bioinformatics)
Liming Cai, Russell L. Malmberg, Yunzhou Wu
2002 J jnl
The inapproximability of non-NP-hard optimization problems.
Theor. Comput. Sci.
Liming Cai, David W. Juedes, Iyad A. Kanj
2001 A* conf
Subexponential Parameterized Algorithms Collapse the W-Hierarchy.
ICALP
Liming Cai, David W. Juedes
2000 B conf
Evolutionary computation techniques for multiple sequence alignment.
CEC
Liming Cai, David Juedes, Evgueni Liakhovitch
1998 J jnl
Circuit Bottom Fan-In and Computational Power.
SIAM J. Comput.
Liming Cai, Jianer Chen, Johan Håstad
1998 B conf
The Inapproximability of Non NP-hard Optimization Problems.
ISAAC
Liming Cai, David W. Juedes, Iyad A. Kanj
1997 — conf
A Grammar Characterization of Logarithmic-Space Computation.
New Trends in Formal Languages
Karl R. Abrahamson, Liming Cai, Steve Gordon
1997 J jnl
Advice Classes of Parameterized Tractability.
Ann. Pure Appl. Log.
Liming Cai, Jianer Chen, Rodney G. Downey, Michael R. Fellows
1997 A conf
Circuit Bottom Fan-in and Computational Power.
CCC
Liming Cai, Jianer Chen, Johan Håstad
1997 J jnl
On Fixed-Parameter Tractability and Approximability of NP Optimization Problems.
J. Comput. Syst. Sci.
Liming Cai, Jianer Chen
1997 J jnl
On the Amount of Nondeterminism and the Power of Verifying.
SIAM J. Comput.
Liming Cai, Jianer Chen
1997 J jnl
On the parameterized complexity of short computation and factorization.
Arch. Math. Log.
Liming Cai, Jianer Chen, Rodney G. Downey, Michael R. Fellows
1996 J jnl
The Computational Complexity of Linear PCGSs.
Comput. Artif. Intell.
Liming Cai
1995 J jnl
On Input Read-Modes of Alternating Turing Machines.
Theor. Comput. Sci.
Liming Cai, Jianer Chen
1995 Misc conf
On log-Time Alternating Turing Machines of Alternation Depth k (Extended Abstract).
COCOON
Liming Cai, Jianer Chen
1995 J jnl
On the Structure of Parameterized Problems in NP.
Inf. Comput.
Liming Cai, Jianer Chen, Rodney G. Downey, Michael R. Fellows
1995 C conf
The Computational Complexity of PCGS with Regular Components.
Developments in Language Theory
Liming Cai
1994 A conf
On the Structure of Parameterized Problems in NP (Extended Abstract).
STACS
Liming Cai, Jianer Chen, Rodney G. Downey, Michael R. Fellows
1993 — conf
On Fixed-Parameter Tractability and Approximability of
ISTCS
Liming Cai, Jianer Chen
1993 B conf
On the Amount of Nondeterminism and the Power of Verifying (Extended Abstract).
MFCS
Liming Cai, Jianer Chen