Li Chen

27 papers C 3Misc 1Journal 14Unranked 8
YearRankTypeTitle / Venue / Authors
2015 J jnl
BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method.
Bioinform.
Xu Shi, Robert O. Barnes, Li Chen, Ayesha N. Shajahan-Haq, Leena Hilakivi-Clarke, Robert Clarke, Yue Joseph Wang, Jianhua Xuan
2014 — conf
Enhancing the convex analysis of mixtures technique for estimating DCE-MRI pharmacokinetic parameters.
EMBC
Ibrahim Mohamed Ibrahim, Guoqiang Yu, Li Chen, Yue Wang
2014 J jnl
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic.
Bioinform.
Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke
2013 J jnl
The CAM software for nonnegative blind source separation in R-Java.
J. Mach. Learn. Res.
Niya Wang, Fan Meng, Li Chen, Subha Madhavan, Robert Clarke, Eric P. Hoffman, Jianhua Xuan, Yue Joseph Wang
2012 C conf
Detecting aberrant signal transduction pathways from high-throughput data using GIST algorithm.
CIBCB
Jinghua Gu, Jianhua Xuan, Chen Wang, Li Chen, Tian-Li Wang, Ie-Ming Shih
2012 Misc conf
Integrative Network Analysis to Identify Aberrant Pathway Networks in Ovarian Cancer.
Pacific Symposium on Biocomputing
Li Chen, Jianhua Xuan, Jinghua Gu, Yue Wang, Zhen Zhang, Tian-Li Wang, Ie-Ming Shih
2012 J jnl
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic.
Bioinform.
Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke
2012 — conf
Sampling-Based Subnetwork Identification from Microarray Data and Protein-Protein Interaction Network.
ICMLA (2)
Xiao Wang, Jinghua Gu, Jianhua Xuan, Ayesha N. Shajahan, Robert Clarke, Li Chen
2011 J jnl
CAM-CM: a signal deconvolution tool for
Bioinform.
Li Chen, Tsung-Han Chan, Peter L. Choyke, Elizabeth M. C. Hillman, Chong-Yung Chi, Zaver M. Bhujwalla, Ge Wang, Sean S. Wang, Zsolt Szabo, Yue Joseph Wang
2011 J jnl
Identifying cancer biomarkers by network-constrained support vector machines.
BMC Syst. Biol.
Li Chen, Jianhua Xuan, Rebecca B. Riggins, Robert Clarke, Yue Joseph Wang
2011 J jnl
Motif-guided sparse decomposition of gene expression data for regulatory module identification.
BMC Bioinform.
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Huai Li, Eric P. Hoffman, Robert Clarke, Yue Joseph Wang
2011 J jnl
Tissue-Specific Compartmental Analysis for Dynamic Contrast-Enhanced MR Imaging of Complex Tumors.
IEEE Trans. Medical Imaging
Li Chen, Peter L. Choyke, Tsung-Han Chan, Chong-Yung Chi, Ge Wang, Yue Joseph Wang
2010 — —
Integrative Modeling and Analysis of High-throughput Biological Data.
Li Chen
2010 J jnl
Multilevel support vector regression analysis to identify condition-specific regulatory networks.
Bioinform.
Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke
2010 — conf
View reconstruction from images by removing vehicles.
GIS-DMG
Li Chen, Lu Jin, Jing Dai, Jianhua Xuan
2009 J jnl
An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions.
Bioinform.
David J. Miller, Yanxin Zhang, Guoqiang Yu, Yongmei Liu, Li Chen, Carl D. Langefeld, David M. Herrington, Yue Joseph Wang
2009 J jnl
Biomarker identification by knowledge-driven multilevel ICA and motif analysis.
Int. J. Data Min. Bioinform.
Li Chen, Jianhua Xuan, Chen Wang, Yue Joseph Wang, Ie-Ming Shih, Tian-Li Wang, Zhen Zhang, Robert Clarke, Eric P. Hoffman
2009 J jnl
Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis.
Int. J. Comput. Biol. Drug Des.
Li Chen, Jianhua Xuan, Yue Joseph Wang, Eric P. Hoffman, Rebecca B. Riggins, Robert Clarke
2008 — conf
Convex analysis and separation of composite signals in DCE-MRI.
ISBI
Li Chen, Tsung-Han Chan, Peter L. Choyke, Chong-Yung Chi, Ge Wang, Yue Joseph Wang
2008 — conf
Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis.
BIOCOMP
Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke
2008 — conf
Integrative Network Component Analysis for Regulatory Network Reconstruction.
ISBRA
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Joseph Wang, Robert Clarke, Eric P. Hoffman
2008 J jnl
Knowledge-guided multi-scale independent component analysis for biomarker identification.
BMC Bioinform.
Li Chen, Jianhua Xuan, Chen Wang, Ie-Ming Shih, Yue Joseph Wang, Zhen Zhang, Eric P. Hoffman, Robert Clarke
2008 J jnl
Motif-directed network component analysis for regulatory network inference.
BMC Bioinform.
Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Joseph Wang, Robert Clarke, Eric P. Hoffman
2008 C conf
Network-Constrained Support Vector Machine for Classification.
ICMLA
Li Chen, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke
2008 — conf
Reliability Analysis of Transcriptional Regulatory Networks.
BCBGC
Chen Wang, Jianhua Xuan, Li Chen, Eric P. Hoffman, Robert Clarke
2008 — conf
Sparse Decomposition of Gene Expression Data to Infer Transcriptional Modules Guided by Motif Information.
ISBRA
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke
2007 C conf
Biomarker Identification by Knowledge-Driven Multi-Level ICA and Motif Analysis.
ICMLA
Li Chen, Chen Wang, Ie-Ming Shih, Tian-Li Wang, Zhen Zhang, Yue Joseph Wang, Robert Clarke, Eric P. Hoffman, Jianhua Xuan