Leonid Oliker - RankMe

154 papers A 48B 5C 5Misc 4Journal 50Unranked 38

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	StFT: Spatio-temporal Fourier Transformer for Long-term Dynamics Prediction. Trans. Mach. Learn. Res. Da Long, Shandian Zhe, Samuel Williams, Leonid Oliker, Zhe Bai
2025	A	`conf`	Benchmark-driven Models for Energy Analysis and Attribution of GPU-Accelerated Supercomputing. SC Oscar Antepara, Zhengji Zhao, Brian Austin, Nan Ding, Leonid Oliker, Nicholas J. Wright, Samuel Williams
2025	C	`conf`	Maximizing Power-Constrained Supercomputing Throughput. ISC Nan Ding, Oscar Antepara, Zhengji Zhao, Brian Austin, Leonid Oliker, Nicholas J. Wright, Samuel Williams
2025	C	`conf`	Optimizing Nuclear Configuration Interaction Calculations on GPUs: A Comparative Performance Study of Programming Models. ISC Abdullah Alperen, Nan Ding, Khaled Z. Ibrahim, Pieter Maris, Leonid Oliker, Chao Yang, Hasan Metin Aktulga
2025	—	`conf`	Roofline Analysis of Tightly-Coupled CPU-GPU Superchips: A Study on MI300A and GH200. SC Workshops Oscar Antepara, Leonid Oliker, Samuel Williams
2025	J	`jnl`	Spatio-temporal Fourier Transformer (StFT) for Long-term Dynamics Prediction. CoRR Da Long, Shandian Zhe, Samuel Williams, Leonid Oliker, Zhe Bai
2025	J	`jnl`	Transfer learning nonlinear plasma dynamic transitions in low dimensional embeddings via deep neural networks. Mach. Learn. Sci. Technol. Zhe Bai, Xishuo Wei, William Tang, Leonid Oliker, Zhihong Lin, Samuel Williams
2024	A	`conf`	A Workflow Roofline Model for End-to-End Workflow Performance Analysis. SC Nan Ding, Brian Austin, Yang Liu, Neil Mehta, Steven Farrell, Johannes P. Blaschke, Leonid Oliker, Hai Ah Nam, Nicholas J. Wright, Samuel Williams
2024	J	`jnl`	Evaluating the potential of disaggregated memory systems for HPC applications. Concurr. Comput. Pract. Exp. Nan Ding, Pieter Maris, Hai Ah Nam, Taylor L. Groves, Muaaz Gul Awan, LeAnn Lindsey, Christopher S. Daley, Oguz Selvitopi, Leonid Oliker, Nicholas J. Wright, Samuel Williams
2024	J	`jnl`	Exabiome: Advancing Microbial Science through Exascale Computing. Comput. Sci. Eng. Steven A. Hofmeyr, Aydin Buluç, Robert Riley, Rob Egan, Oguz Selvitopi, Leonid Oliker, Katherine A. Yelick, Migun Shakya, Brett Youtsey, Ariful Azad
2024	J	`jnl`	FTL: Transfer Learning Nonlinear Plasma Dynamic Transitions in Low Dimensional Embeddings via Deep Neural Networks. CoRR Zhe Bai, Xishuo Wei, William Tang, Leonid Oliker, Zhihong Lin, Samuel Williams
2023	—	`conf`	Designing Efficient SIMD Kernels for High Performance Sequence Alignment. IPDPS Workshops Doru-Thom Popovici, Muaaz Gul Awan, Giulia Guidi, Rob Egan, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick
2023	J	`jnl`	Evaluating the Potential of Disaggregated Memory Systems for HPC applications. CoRR Nan Ding, Pieter Maris, Hai Ah Nam, Taylor L. Groves, Muaaz Gul Awan, LeAnn Lindsey, Christopher S. Daley, Oguz Selvitopi, Leonid Oliker, Nicholas J. Wright, Samuel Williams
2023	J	`jnl`	Extreme-scale many-against-many protein similarity search. CoRR Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	B	`conf`	Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. ICPP Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	J	`jnl`	Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. CoRR Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	A	`conf`	Extreme-Scale Many-against-Many Protein Similarity Search. SC Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	A	`conf`	Preprocessing Pipeline Optimization for Scientific Deep Learning Workloads. IPDPS Khaled Z. Ibrahim, Leonid Oliker
2021	A	`conf`	Accelerating large scale SC Muaaz Gul Awan, Steven A. Hofmeyr, Rob Egan, Nan Ding, Aydin Buluç, Jack Deslippe, Leonid Oliker, Katherine A. Yelick
2021	—	`conf`	Architectural Requirements for Deep Learning Workloads in HPC Environments. PMBS Khaled Z. Ibrahim, Tan Nguyen, Hai Ah Nam, Wahid Bhimji, Steven Farrell, Leonid Oliker, Michael Rowan, Nicholas J. Wright, Samuel Williams
2021	A	`conf`	Distributed-Memory k-mer Counting on GPUs. IPDPS Israt Nisa, Prashant Pandey, Marquita Ellis, Leonid Oliker, Aydin Buluç, Katherine A. Yelick
2021	A	`conf`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. IPDPS Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2020	J	`jnl`	ADEPT: a domain independent sequence alignment strategy for gpu architectures. BMC Bioinform. Muaaz G. Awan, Jack Deslippe, Aydin Buluç, Oguz Selvitopi, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick
2020	—	`conf`	GPU accelerated partial order multiple sequence alignment for long reads self-correction. IPDPS Workshops Francesco Peverelli, Lorenzo Di Tucci, Marco D. Santambrogio, Nan Ding, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	A	`conf`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. IPDPS Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. CoRR Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. CoRR Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2020	J	`jnl`	The Parallelism Motifs of Genomic Data Analysis. CoRR Katherine A. Yelick, Aydin Buluç, Muaaz G. Awan, Ariful Azad, Benjamin Brock, Rob Egan, Saliya Ekanayake, Marquita Ellis, Evangelos Georganas, Giulia Guidi, Steven A. Hofmeyr, Oguz Selvitopi, Cristina Teodoropol, Leonid Oliker
2020	C	`conf`	Timemory: Modular Performance Analysis for HPC. ISC Jonathan R. Madsen, Muaaz G. Awan, Hugo Brunie, Jack Deslippe, Rahulkumar Gayatri, Leonid Oliker, Yunsong Wang, Charlene Yang, Samuel Williams
2020	J	`jnl`	diBELLA: Distributed Long Read to Long Read Alignment. CoRR Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2019	J	`jnl`	Modern gyrokinetic particle-in-cell simulation of fusion plasmas on top supercomputers. Int. J. High Perform. Comput. Appl. Bei Wang, Stéphane Ethier, William M. Tang, Khaled Z. Ibrahim, Kamesh Madduri, Samuel Williams, Leonid Oliker
2019	—	`conf`	Performance Analysis of GPU Programming Models Using the Roofline Scaling Trajectories. Bench Khaled Z. Ibrahim, Samuel Williams, Leonid Oliker
2019	B	`conf`	diBELLA: Distributed Long Read to Long Read Alignment. ICPP Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	C	`conf`	A Novel Multi-level Integrated Roofline Model Approach for Performance Characterization. ISC Tuomas Koskela, Zakhar Matveev, Charlene Yang, Adetokunbo Adedoyin, Roman Belenov, Philippe Thierry, Zhengji Zhao, Rahulkumar Gayatri, Hongzhang Shan, Leonid Oliker, Jack Deslippe, Ron Green, Samuel Williams
2018	A	`conf`	Communication-Avoiding Optimization Methods for Distributed Massive-Scale Sparse Inverse Covariance Estimation. AISTATS Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Leonid Oliker, Katherine A. Yelick, Sang-Yun Oh
2018	J	`jnl`	Extreme Scale De Novo Metagenome Assembly. CoRR Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	A	`conf`	Extreme scale de novo metagenome assembly. SC Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	—	`conf`	Roofline Scaling Trajectories: A Method for Parallel Application and Architectural Performance Analysis. HPCS Khaled Z. Ibrahim, Samuel Williams, Leonid Oliker
2017	—	`conf`	Analyzing Performance of Selected NESAP Applications on the Cori HPC System. ISC Workshops Thorsten Kurth, William Arndt, Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Samuel Williams, Woo-Sun Yang, Zhengji Zhao
2017	J	`jnl`	Communication-Avoiding Optimization Methods for Massive-Scale Graphical Model Structure Learning. CoRR Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick
2017	J	`jnl`	Compiler-based code generation and autotuning for geometric multigrid on GPU-accelerated supercomputers. Parallel Comput. Protonu Basu, Samuel Williams, Brian van Straalen, Leonid Oliker, Phillip Colella, Mary W. Hall
2017	J	`jnl`	Extreme-Scale De Novo Genome Assembly. CoRR Evangelos Georganas, Steven A. Hofmeyr, Rob Egan, Aydin Buluç, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2017	J	`jnl`	High-End Computing for Next-Generation Scientific Discovery. Parallel Comput. Rupak Biswas, David Donofrio, Leonid Oliker
2017	—	`conf`	MerBench: PGAS Benchmarks for High Performance Genome Assembly. PAW@SC Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
2017	—	`conf`	Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems. Euro-Par Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
2017	—	`conf`	Performance analysis and optimization of the RAMPAGE metal alloy potential generation software. SEPS@SPLASH Philip C. Roth, Hongzhang Shan, David Riegner, Nikolas Antolin, Sarat Sreepathi, Leonid Oliker, Samuel Williams, Shirley Moore, Wolfgang Windl
2016	—	`conf`	Applying the Roofline Performance Model to the Intel Xeon Phi Knights Landing Processor. ISC Workshops Douglas Doerfler, Jack Deslippe, Samuel Williams, Leonid Oliker, Brandon Cook, Thorsten Kurth, Mathieu Lobet, Tareq M. Malas, Jean-Luc Vay, Henri Vincenti
2016	A	`conf`	Communication-Avoiding Parallel Sparse-Dense Matrix-Matrix Multiplication. IPDPS Penporn Koanantakool, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick
2016	—	`conf`	Evaluating and Optimizing the NERSC Workload on Knights Landing. PMBS@SC Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Thorsten Kurth, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Abhinav Sarje, Jean-Luc Vay, Henri Vincenti, Samuel Williams, Pierre Carrier, Nathan Wichmann, Marcus Wagner, Paul R. C. Kent, Christopher Kerr, John M. Dennis
2016	A	`conf`	Extreme scale plasma turbulence simulations on top supercomputers worldwide. SC William M. Tang, Bei Wang, Stéphane Ethier, Grzegorz Kwasniewski, Torsten Hoefler, Khaled Z. Ibrahim, Kamesh Madduri, Samuel Williams, Leonid Oliker, Carlos Rosales-Fernandez, Timothy J. Williams
2016	J	`jnl`	LiRa: A New Likelihood-Based Similarity Score for Collaborative Filtering. CoRR Veronika Strnadová-Neeley, Aydin Buluç, John R. Gilbert, Leonid Oliker, Weimin Ouyang
2015	A	`conf`	Compiler-Directed Transformation for Higher-Order Stencils. IPDPS Protonu Basu, Mary W. Hall, Samuel Williams, Brian van Straalen, Leonid Oliker, Phillip Colella
2015	—	`conf`	Efficient data reduction for large-scale genetic mapping. BCB Veronika Strnadová-Neeley, Aydin Buluç, Jarrod Chapman, John R. Gilbert, Joseph Gonzalez, Leonid Oliker
2015	A	`conf`	HipMer: an extreme-scale de novo genome assembler. SC Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Steven A. Hofmeyr, Chaitanya Aluru, Rob Egan, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2015	J	`jnl`	Modern Gyrokinetic Particle-In-Cell Simulation of Fusion Plasmas on Top Supercomputers. CoRR Bei Wang, Stéphane Ethier, William M. Tang, Khaled Z. Ibrahim, Kamesh Madduri, Samuel Williams, Leonid Oliker
2015	Misc	`conf`	Parallel Performance Optimizations on Unstructured Mesh-based Simulations. ICCS Abhinav Sarje, Sukhyun Song, Douglas Jacobsen, Kevin A. Huck, Jeffrey K. Hollingsworth, Allen D. Malony, Samuel Williams, Leonid Oliker
2015	J	`jnl`	Parallel processing of filtered queries in attributed semantic graphs. J. Parallel Distributed Comput. Adam Lugowski, Shoaib Kamil, Aydin Buluç, Samuel Williams, Erika Duriakova, Leonid Oliker, Armando Fox, John R. Gilbert
2015	J	`jnl`	Special issue "Graph analysis for scientific discovery". Parallel Comput. Aydin Buluç, Leonid Oliker, John R. Gilbert
2015	—	`conf`	Thread-level parallelization and optimization of NWChem for the Intel MIC architecture. PMAM@PPoPP Hongzhang Shan, Samuel Williams, Wibe de Jong, Leonid Oliker
2015	A	`conf`	merAligner: A Fully Parallel Sequence Aligner. IPDPS Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2014	—	`conf`	Efficient and accurate clustering for large-scale genetic mapping. BIBM Veronika Strnadova, Aydin Buluç, Jarrod Chapman, John R. Gilbert, Joseph Gonzalez, Stefanie Jegelka, Daniel Rokhsar, Leonid Oliker
2014	A	`conf`	Parallel De Bruijn Graph Construction and Traversal for De Novo Genome Assembly. SC Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2014	—	`conf`	Roofline Model Toolkit: A Practical Tool for Architectural and Program Analysis. PMBS@SC Yu Jung Lo, Samuel Williams, Brian van Straalen, Terry J. Ligocki, Matthew J. Cordery, Nicholas J. Wright, Mary W. Hall, Leonid Oliker
2013	J	`jnl`	Analysis and optimization of gyrokinetic toroidal simulations on homogenous and heterogenous platforms. Int. J. High Perform. Comput. Appl. Khaled Z. Ibrahim, Kamesh Madduri, Samuel Williams, Bei Wang, Stéphane Ethier, Leonid Oliker
2013	J	`jnl`	Best paper awards: 26th international parallel and distributed processing symposium (IPDPS 2012). J. Parallel Distributed Comput. Leonid Oliker, Katherine A. Yelick
2013	Misc	`conf`	Compiler generation and autotuning of communication-avoiding operators for geometric multigrid. HiPC Protonu Basu, Anand Venkat, Mary W. Hall, Samuel Williams, Brian van Straalen, Leonid Oliker
2013	A	`conf`	High-Productivity and High-Performance Analysis of Filtered Semantic Graphs. IPDPS Aydin Buluç, Erika Duriakova, Armando Fox, John R. Gilbert, Shoaib Kamil, Adam Lugowski, Leonid Oliker, Samuel Williams
2013	J	`jnl`	Introduction for Special Issue on Autotuning. Int. J. High Perform. Comput. Appl. Leonid Oliker, Richard W. Vuduc
2013	A	`conf`	Kinetic turbulence simulations at extreme scale on leadership-class systems. SC Bei Wang, Stéphane Ethier, William M. Tang, Timothy J. Williams, Khaled Z. Ibrahim, Kamesh Madduri, Samuel Williams, Leonid Oliker
2013	—	`conf`	Performance Tuning of Fock Matrix and Two-Electron Integral Calculations for NWChem on Leading HPC Platforms. PMBS@SC Hongzhang Shan, Brian Austin, Wibe de Jong, Leonid Oliker, Nicholas J. Wright, Edoardo Aprà
2012	—	`conf`	Abstract: Advances in Gyrokinetic Particle in Cell Simulation for Fusion Plasmas to Extreme Scale. SC Companion Bei Wang, Stéphane Ethier, William M. Tang, Khaled Z. Ibrahim, Kamesh Madduri, Samuel W. Williams, Leonid Oliker, Timothy J. Williams
2012	—	`conf`	Can Network-Offload Based Non-blocking Neighborhood MPI Collectives Improve Communication Overheads of Irregular Graph Algorithms? CLUSTER Workshops Krishna Chaitanya Kandalla, Aydin Buluç, Hari Subramoni, Karen Tomko, Jérôme Vienne, Leonid Oliker, Dhabaleswar K. Panda
2012	B	`conf`	High-performance analysis of filtered semantic graphs. PACT Aydin Buluç, Armando Fox, John R. Gilbert, Shoaib Kamil, Adam Lugowski, Leonid Oliker, Samuel Williams
2012	J	`jnl`	Optimization of Parallel Particle-to-Grid Interpolation on Leading Multicore Platforms. IEEE Trans. Parallel Distributed Syst. Kamesh Madduri, Jimmy Su, Samuel Williams, Leonid Oliker, Stéphane Ethier, Katherine A. Yelick
2012	A	`conf`	Optimization of geometric multigrid for emerging multi- and manycore processors. SC Samuel Williams, Dhiraj D. Kalamkar, Amik Singh, Anand M. Deshpande, Brian van Straalen, Mikhail Smelyanskiy, Ann S. Almgren, Pradeep Dubey, John Shalf, Leonid Oliker
2012	—	`conf`	Poster: Advances in Gyrokinetic Particle in Cell Simulation for Fusion Plasmas to Extreme Scale. SC Companion Bei Wang, Stéphane Ethier, William M. Tang, Khaled Z. Ibrahim, Kamesh Madduri, Samuel W. Williams, Leonid Oliker, Timothy J. Williams
2011	A	`conf`	Cosmic microwave background map-making at the petascale and beyond. ICS Rajesh Sudarsan, Julian Borrill, Christopher Cantalupo, Theodore Kisner, Kamesh Madduri, Leonid Oliker, Yili Zheng, Horst D. Simon
2011	J	`jnl`	Emerging programming paradigms for large-scale scientific computing. Parallel Comput. Leonid Oliker, Rajesh Nishtala, Rupak Biswas
2011	A	`conf`	Extracting ultra-scale Lattice Boltzmann performance via hierarchical and distributed auto-tuning. SC Samuel Williams, Leonid Oliker, Jonathan Carter, John Shalf
2011	—	`ch.`	Green Flash: Climate Machine (LBNL). Encyclopedia of Parallel Computing John Shalf, David Donofrio, Chris Rowen, Leonid Oliker, Michael F. Wehner
2011	J	`jnl`	Gyrokinetic particle-in-cell optimization on emerging multi- and manycore platforms. Parallel Comput. Kamesh Madduri, Eun-Jin Im, Khaled Z. Ibrahim, Samuel Williams, Stéphane Ethier, Leonid Oliker
2011	A	`conf`	Gyrokinetic toroidal simulations on leading multi- and manycore HPC systems. SC Kamesh Madduri, Khaled Z. Ibrahim, Samuel Williams, Eun-Jin Im, Stéphane Ethier, John Shalf, Leonid Oliker
2011	A	`conf`	Hardware/software co-design for energy-efficient seismic modeling. SC Jens Krueger, David Donofrio, John Shalf, Marghoob Mohiyuddin, Samuel Williams, Leonid Oliker, Franz-Josef Pfreundt
2011	A	`conf`	Reduced-Bandwidth Multithreaded Algorithms for Sparse Matrix-Vector Multiplication. IPDPS Aydin Buluç, Samuel Williams, Leonid Oliker, James Demmel
2010	A	`conf`	An auto-tuning framework for parallel multicore stencil computations. IPDPS Shoaib Kamil, Cy P. Chan, Leonid Oliker, John Shalf, Samuel Williams
2010	—	`ch.`	Auto-Tuning Stencil Computations on Multicore and Accelerators. Scientific Computing with Multicore and Accelerators Kaushik Datta, Samuel Williams, Vasily Volkov, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2010	J	`jnl`	Communication Requirements and Interconnect Optimization for High-End Scientific Applications. IEEE Trans. Parallel Distributed Syst. Shoaib Kamil, Leonid Oliker, Ali Pinar, John Shalf
2010	A	`conf`	Optimizing and tuning the fast multipole method for state-of-the-art multicore architectures. IPDPS Aparna Chandramowlishwaran, Samuel Williams, Leonid Oliker, Ilya Lashuk, George Biros, Richard W. Vuduc
2010	A	`conf`	Parallel I/O performance: From events to ensembles. IPDPS Andrew Uselton, Mark Howison, Nicholas J. Wright, David Skinner, Noel Keen, John Shalf, Karen L. Karavanic, Leonid Oliker
2010	—	`conf`	Silicon Nanophotonic Network-on-Chip Using TDM Arbitration. Hot Interconnects Gilbert Hendry, Johnnie Chan, Shoaib Kamil, Leonid Oliker, John Shalf, Luca P. Carloni, Keren Bergman
2010	—	`ch.`	Sparse Matrix-Vector Multiplication on Multicore and Accelerators. Scientific Computing with Multicore and Accelerators Samuel Williams, Nathan Bell, Jee Whan Choi, Michael Garland, Leonid Oliker, Richard Vu
2009	A	`conf`	A design methodology for domain-optimized power-efficient supercomputing. SC Marghoob Mohiyuddin, Mark Murphy, Leonid Oliker, John Shalf, John Wawrzynek, Samuel Williams
2009	—	`conf`	Analysis of photonic networks for a chip multiprocessor using scientific applications. NOCS Gilbert Hendry, Shoaib Kamil, Aleksandr Biberman, Johnnie Chan, Benjamin G. Lee, Marghoob Mohiyuddin, Ankit Jain, Keren Bergman, Luca P. Carloni, John Kubiatowicz, Leonid Oliker, John Shalf
2009	J	`jnl`	Energy-Efficient Computing for Extreme-Scale Science. Computer David Donofrio, Leonid Oliker, John Shalf, Michael F. Wehner, Chris Rowen, Jens Krueger, Shoaib Kamil, Marghoob Mohiyuddin
2009	A	`conf`	Green flash: Designing an energy efficient climate supercomputer. IPDPS Leonid Oliker
2009	J	`jnl`	HPC global file system performance analysis using a scientific-application derived benchmark. Parallel Comput. Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan, Andrew Uselton
2009	—	`conf`	Improving Memory Subsystem Performance Using ViVA: Virtual Vector Architecture. ARCS Joseph Gebis, Leonid Oliker, John Shalf, Samuel Williams, Katherine A. Yelick
2009	A	`conf`	Memory-efficient optimization of Gyrokinetic particle-to-grid interpolation for multicore processors. SC Kamesh Madduri, Samuel Williams, Stéphane Ethier, Leonid Oliker, John Shalf, Erich Strohmaier, Katherine A. Yelick
2009	J	`jnl`	Optimization and Performance Modeling of Stencil Computations on Modern Microprocessors. SIAM Rev. Kaushik Datta, Shoaib Kamil, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick
2009	J	`jnl`	Optimization of a lattice Boltzmann computation on state-of-the-art multicore platforms. J. Parallel Distributed Comput. Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2009	J	`jnl`	Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Parallel Comput. Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel
2009	J	`jnl`	Revolutionary technologies for acceleration of emerging petascale applications. Parallel Comput. Rupak Biswas, Leonid Oliker, Jeffrey S. Vetter
2008	J	`jnl`	Large-scale gyrokinetic particle simulation of microturbulence in magnetically confined fusion plasmas. IBM J. Res. Dev. Stéphane Ethier, William M. Tang, Robert Walkup, Leonid Oliker
2008	A	`conf`	Lattice Boltzmann simulation optimization on leading multicore platforms. IPDPS Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2008	J	`jnl`	Preface. Int. J. High Perform. Comput. Appl. Rupak Biswas, Leonid Oliker
2008	J	`jnl`	Scientific Application Performance On Leading Scalar and Vector Supercomputering Platforms. Int. J. High Perform. Comput. Appl. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier
2008	A	`conf`	Stencil computation optimization and auto-tuning on state-of-the-art multicore architectures. SC Kaushik Datta, Mark Murphy, Vasily Volkov, Samuel Williams, Jonathan Carter, Leonid Oliker, David A. Patterson, John Shalf, Katherine A. Yelick
2008	J	`jnl`	Towards Ultra-High Resolution Models of Climate and Weather. Int. J. High Perform. Comput. Appl. Michael F. Wehner, Leonid Oliker, John Shalf
2007	A	`conf`	Investigation of leading HPC I/O performance using a scientific-application derived benchmark. SC Julian Borrill, Leonid Oliker, John Shalf, Hongzhang Shan
2007	A	`conf`	Optimization of sparse matrix-vector multiplication on emerging multicore platforms. SC Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel
2007	—	`conf`	Reconfigurable hybrid interconnection for static and dynamic scientific applications. Conf. Computing Frontiers Shoaib Kamil, Ali Pinar, Daniel K. Gunter, Michael Lijewski, Leonid Oliker, John Shalf
2007	A	`conf`	Scientific Application Performance on Candidate PetaScale Platforms. IPDPS Leonid Oliker, Andrew Canning, Jonathan Carter, Costin Iancu, Michael Lijewski, Shoaib Kamil, John Shalf, Hongzhang Shan, Erich Strohmaier, Stéphane Ethier, Tom Goodale
2007	J	`jnl`	Scientific Computing Kernels on the Cell Processor. Int. J. Parallel Program. Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick
2006	—	`conf`	Implicit and explicit optimizations for stencil computations. Memory System Performance and Correctness Shoaib Kamil, Kaushik Datta, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick
2006	—	`ch.`	Performance Evaluation and Modeling of Ultra-Scale Systems. Parallel Processing for Scientific Computing Leonid Oliker, Rupak Biswas, Rob F. Van der Wijngaart, David H. Bailey, Allan Snavely
2006	—	`conf`	Performance Evaluation of Scientific Applications on Modern Parallel Vector Systems. VECPAR Jonathan Carter, Leonid Oliker, John Shalf
2006	—	`conf`	Performance characteristics of an adaptive mesh refinement calculation on scalar and vector platforms. Conf. Computing Frontiers Michael L. Welcome, Charles A. Rendleman, Leonid Oliker, Rupak Biswas
2006	—	`conf`	The potential of the cell processor for scientific computing. Conf. Computing Frontiers Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick
2005	A	`conf`	Analyzing Ultra-Scale Application Communication Requirements for a Reconfigurable Hybrid Interconnect. SC John Shalf, Shoaib Kamil, Leonid Oliker, David Skinner
2005	—	`conf`	Impact of modern memory subsystems on cache optimizations for stencil computations. Memory System Performance Shoaib Kamil, Parry Husbands, Leonid Oliker, John Shalf, Katherine A. Yelick
2005	B	`conf`	Integrated Performance Monitoring of a Cosmology Application on Leading HEC Platforms. ICPP Julian Borrill, Jonathan Carter, Leonid Oliker, David Skinner, Rupak Biswas
2005	A	`conf`	Leading Computational Methods on Scalar and Vector HEC Platforms. SC Leonid Oliker, Jonathan Carter, Michael F. Wehner, Andrew Canning, Stéphane Ethier, Arthur A. Mirin, David Parks, Patrick H. Worley, Shigemune Kitawaki, Yoshinori Tsuda
2005	J	`jnl`	Performance evaluation of the SX-6 vector architecture for scientific computations. Concurr. Pract. Exp. Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart
2004	—	`conf`	A Performance Evaluation of the Cray X1 for Scientific Applications. VECPAR Leonid Oliker, Rupak Biswas, Julian Borrill, Andrew Canning, Jonathan Carter, M. Jahed Djomehri, Hongzhang Shan, David Skinner
2004	A	`conf`	Identifying Performance Bottlenecks on Modern Microarchitectures Using an Adaptable Probe. IPDPS Gorden Griem, Leonid Oliker, John Shalf, Katherine A. Yelick
2004	Misc	`conf`	Performance Characteristics of a Cosmology Package on Leading HPC Architectures. HiPC Jonathan Carter, Julian Borrill, Leonid Oliker
2004	A	`conf`	Scientific Computations on Modern Parallel Vector Systems. SC Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, Stéphane Ethier
2003	A	`conf`	Evaluation of Cache-based Superscalar and Cacheless Vector Architectures for Scientific Computations. SC Leonid Oliker, Andrew Canning, Jonathan Carter, John Shalf, David Skinner, Stéphane Ethier, Rupak Biswas, M. Jahed Djomehri, Rob F. Van der Wijngaart
2003	A	`conf`	Job Superscheduler Architecture and Performance in Computational Grid Environments. SC Hongzhang Shan, Leonid Oliker, Rupak Biswas
2003	J	`jnl`	Message passing and shared address space parallelism on an SMP cluster. Parallel Comput. Hongzhang Shan, Jaswinder Pal Singh, Leonid Oliker, Rupak Biswas
2003	A	`conf`	Performance Evaluation of Two Emerging Media Processors: VIRAM and Imagine. IPDPS Sourav Chatterji, Manikandan Narayanan, Jason Duell, Leonid Oliker
2002	J	`jnl`	A Comparison of Three Programming Models for Adaptive Applications on the Origin2000. J. Parallel Distributed Comput. Hongzhang Shan, Jaswinder Pal Singh, Leonid Oliker, Rupak Biswas
2002	J	`jnl`	Effects of Ordering Strategies and Programming Paradigms on Sparse Matrix Computations. SIAM Rev. Leonid Oliker, Xiaoye S. Li, Parry Husbands, Rupak Biswas
2002	A	`conf`	Memory-Intensive Benchmarks: IRAM vs. Cache-Based Machines. IPDPS Brian R. Gaeke, Parry Husbands, Xiaoye S. Li, Leonid Oliker, Katherine A. Yelick, Rupak Biswas
2001	—	`conf`	Design Strategies for Irregularly Adapting Parallel Applications. PP Leonid Oliker, Rupak Biswas, Hongzhang Shan, Jaswinder Pal Singh
2001	A	`conf`	Message Passing Vs. Shared Address Space on a Clusters of SMPs. IPDPS Hongzhang Shan, Jaswinder Pal Singh, Leonid Oliker, Rupak Biswas
2001	—	`conf`	Ordering Sparse Matrices for Cache-Based Systems. PP Rupak Biswas, Leonid Oliker
2000	A	`conf`	A Comparison of Three Programming Models for Adaptive Applications on the Origin2000. SC Hongzhang Shan, Jaswinder Pal Singh, Leonid Oliker, Rupak Biswas
2000	A	`conf`	ESP: A System Utilization Benchmark. SC Adrian T. Wong, Leonid Oliker, William T. C. Kramer, Teresa L. Kaltz, David H. Bailey
2000	—	`conf`	Ordering Unstructured Meshes for Sparse Matrix Computations on Leading Parallel Systems. IPDPS Workshops Leonid Oliker, Xiaoye S. Li, Gerd Heber, Rupak Biswas
2000	J	`jnl`	Parallel tetrahedral mesh adaptation with dynamic load balancing. Parallel Comput. Leonid Oliker, Rupak Biswas, Harold N. Gabow
2000	J	`jnl`	Parallelization of a Dynamic Unstructured Algorithm Using Three Leading Programming Paradigms. IEEE Trans. Parallel Distributed Syst. Leonid Oliker, Rupak Biswas
2000	C	`conf`	System Utilization Benchmark on the Cray T3E and IBM SP. JSSPP Adrian T. Wong, Leonid Oliker, William T. C. Kramer, Teresa L. Kaltz, David H. Bailey
1999	—	`conf`	Dynamic Load Balancing for Parallel Adaptive Unstructured Grid Computations. PP Rupak Biswas, Leonid Oliker
1999	A	`conf`	Parallelization of a Dynamic Unstructured Application using Three Leading Paradigms. SC Leonid Oliker, Rupak Biswas
1999	—	`conf`	Portable Parallel Programming for the Dynamic Load Balancing of Unstructured Grid Applications. IPPS/SPDP Rupak Biswas, Leonid Oliker, Sajal K. Das, Daniel J. Harvey
1998	J	`jnl`	PLUM: Parallel Load Balancing for Adaptive Unstructured Meshes. J. Parallel Distributed Comput. Leonid Oliker, Rupak Biswas
1998	—	`conf`	Performance Analysis and Portability of the PLUM Load Balancing System. Euro-Par Leonid Oliker, Rupak Biswas, Harold N. Gabow
1997	B	`conf`	Efficient Load Balancing and Data Remapping for Adaptive Grid Calculations. SPAA Leonid Oliker, Rupak Biswas
1997	—	`conf`	Load Balancing Unstructured Adaptive Grids for CFD Problems. PP Rupak Biswas, Leonid Oliker
1997	Misc	`conf`	Load balancing sequences of unstructured adaptive grids. HiPC Rupak Biswas, Leonid Oliker
1996	J	`jnl`	Algorithms for Automatic Alignment of Arrays. J. Parallel Distributed Comput. Siddhartha Chatterjee, John R. Gilbert, Leonid Oliker, Robert Schreiber, Thomas J. Sheffler
1996	A	`conf`	Global Load Balancing with Parallel Mesh Adaption on Distributed-Memory Systems. SC Rupak Biswas, Leonid Oliker, Andrew Sohn
1996	—	`conf`	Parallel Implementation of an Adaptive Scheme for 3D Unstructured Grids on the SP2. IRREGULAR Leonid Oliker, Rupak Biswas, Roger C. Strawn