Lei Wang

73 papers A* 1Journal 56Unranked 16
YearRankTypeTitle / Venue / Authors
2026 J jnl
Attention-Guided Multiview Deep Learning Framework Uncovers miRNA-Drug Associations for Therapeutic Discovery.
J. Chem. Inf. Model.
Yan Wang, Yunzhi Liu, Chenxu Si, Jie Hong, Lei Wang, Lan Huang, Nan Sheng
2026 A* conf
Dual-Channel Learning Framework for Zero-Shot CircRNA-miRNA Interaction Prediction via State Space Modeling.
AAAI
Mengmeng Wei, Lei Wang, Zhu-Hong You, Pengwei Hu, Bowei Zhao, Zhi-An Huang, Yu-An Huang, Haicheng Yi
2026 J jnl
MuGNet-CMI: Multi-Head Hybrid Graph Neural Network for Predicting circRNA-miRNA Interactions With Global High-Order and Local Low-Order Information.
IEEE Trans. Big Data
Chen Jiang, Lei Wang, Changqing Yu, Zhuhong You, Xinfei Wang, Mengmeng Wei, Mianshuo Lu
2026 J jnl
Multi-hop graph structural modeling for cancer-related circRNA-miRNA interaction prediction.
Pattern Recognit.
Mengmeng Wei, Lei Wang, Xiao-Rui Su, Bowei Zhao, Zhuhong You
2025 — conf
A Novel Sparse-Aware Topology Reconstruction and Global Dependency Enhanced Method for Predicting Human Microbe-Disease Associations.
BIBM
Yuehu Wu, Lei Wang, Zhengwei Li, Mengmeng Wei, Changchun Liu, Yi Wang
2025 J jnl
Collaborative Framework for circRNA-Disease Associations Prediction Using Dual Variational Graph.
IEEE Trans. Big Data
Changchun Liu, Lei Wang, Bowei Zhao, Mengmeng Wei, Yang Li, Mianshuo Lu, Yu Wei, Si-Zhe Liang
2025 J jnl
Deep-Learning-Based Integration of Sequence and Structure Information for Efficiently Predicting miRNA-Drug Associations.
J. Chem. Inf. Model.
Nan Sheng, Yunzhi Liu, Ling Gao, Lei Wang, Chenxu Si, Lan Huang, Yan Wang
2025 J jnl
Hypergraph representation learning for identifying circRNA-disease associations.
Pattern Recognit.
Yang Li, Xuegang Hu, Peipei Li, Lei Wang, Zhuhong You
2025 J jnl
Integrating Transformer and Graph Attention Network for circRNA-miRNA Interaction Prediction.
IEEE J. Biomed. Health Informatics
Mengmeng Wei, Lei Wang, Bo-Wei Zhao, Xiao-Rui Su, Zhu-Hong You, De-Shuang Huang
2025 J jnl
Local-Global Structure-Aware Geometric Equivariant Graph Representation Learning for Predicting Protein-Ligand Binding Affinity.
IEEE Trans. Neural Networks Learn. Syst.
Shihong Chen, Haicheng Yi, Zhuhong You, Xuequn Shang, Yu-An Huang, Lei Wang, Zhen Wang
2025 J jnl
Multi-view fusion based on graph convolutional network with attention mechanism for predicting miRNA related to drugs.
PLoS Comput. Biol.
Nan Sheng, Yunzhi Liu, Ling Gao, Lei Wang, Lan Huang, Yan Wang
2025 J jnl
Self-Supervised Contrastive Learning on Attribute and Topology Graphs for Predicting Relationships Among lncRNAs, miRNAs and Diseases.
IEEE J. Biomed. Health Informatics
Lan Huang, Nan Sheng, Ling Gao, Lei Wang, Wenju Hou, Jie Hong, Yan Wang
2024 J jnl
A PiRNA-disease association model incorporating sequence multi-source information with graph convolutional networks.
Appl. Soft Comput.
Lei Wang, Zheng-Wei Li, Jing Hu, Leon Wong, Bo-Wei Zhao, Zhu-Hong You
2024 J jnl
A multi-task prediction method based on neighborhood structure embedding and signed graph representation learning to infer the relationship between circRNA, miRNA, and cancer.
Briefings Bioinform.
Lan Huang, Xin-Fei Wang, Yan Wang, Ren-Chu Guan, Nan Sheng, Xuping Xie, Lei Wang, Ziqi Zhao
2024 J jnl
AMDECDA: Attention Mechanism Combined With Data Ensemble Strategy for Predicting CircRNA-Disease Association.
IEEE Trans. Big Data
Lei Wang, Leon Wong, Zhu-Hong You, De-Shuang Huang
2024 J jnl
BEROLECMI: a novel prediction method to infer circRNA-miRNA interaction from the role definition of molecular attributes and biological networks.
BMC Bioinform.
Xin-Fei Wang, Chang-Qing Yu, Zhu-Hong You, Yan Wang, Lan Huang, Yan Qiao, Lei Wang, Zheng-Wei Li
2024 J jnl
BioKG-CMI: a multi-source feature fusion model based on biological knowledge graph for predicting circRNA-miRNA interactions.
Sci. China Inf. Sci.
Mengmeng Wei, Lei Wang, Yang Li, Zhengwei Li, Bowei Zhao, Xiao-Rui Su, Yu Wei, Zhuhong You
2024 J jnl
Biolinguistic graph fusion model for circRNA-miRNA association prediction.
Briefings Bioinform.
Lu-Xiang Guo, Lei Wang, Zhu-Hong You, Chang-Qing Yu, Meng-Lei Hu, Bo-Wei Zhao, Yang Li
2024 — conf
EELMCDA: Combining evolutionary ensemble learning with matrix feature decomposition for predicting circRNA-disease associations.
BIBM
Zheng Wang, Lei Wang, Zhu-Hong You, Lei Wang, Yang Li, Zhenyu Wang
2024 J jnl
Fusing Higher and Lower-Order Biological Information for Drug Repositioning via Graph Representation Learning.
IEEE Trans. Emerg. Top. Comput.
Bo-Wei Zhao, Lei Wang, Pengwei Hu, Leon Wong, Xiao-Rui Su, Bao-Quan Wang, Zhu-Hong You, Lun Hu
2024 J jnl
GSLCDA: An Unsupervised Deep Graph Structure Learning Method for Predicting CircRNA-Disease Association.
IEEE J. Biomed. Health Informatics
Lei Wang, Zheng-Wei Li, Zhu-Hong You, De-Shuang Huang, Leon Wong
2024 J jnl
HHOMR: a hybrid high-order moment residual model for miRNA-disease association prediction.
Briefings Bioinform.
Zhengwei Li, Lipeng Wan, Lei Wang, Wenjing Wang, Ru Nie
2024 J jnl
LMGATCDA: Graph Neural Network With Labeling Trick for Predicting circRNA-Disease Associations.
IEEE ACM Trans. Comput. Biol. Bioinform.
Wenjing Wang, Pengyong Han, Zhengwei Li, Ru Nie, Kangwei Wang, Lei Wang, Hongmei Liao
2024 J jnl
Likelihood-based feature representation learning combined with neighborhood information for predicting circRNA-miRNA associations.
Briefings Bioinform.
Lu-Xiang Guo, Lei Wang, Zhu-Hong You, Chang-Qing Yu, Meng-Lei Hu, Bo-Wei Zhao, Yang Li
2024 J jnl
MAGCDA: A Multi-Hop Attention Graph Neural Networks Method for CircRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
Lei Wang, Zheng-Wei Li, Zhu-Hong You, De-Shuang Huang, Leon Wong
2024 — conf
Predicting CircRNA-Disease Associations Through Non-negative Matrix Factorization and Adversarially Regularized Variational Graph Autoencoder.
BIBM
Mianshuo Lu, Lei Wang, Jinzhu Sun, Yang Li, Mengmeng Wei, Yu Wei, Changchun Liu, Zhengwei Li
2023 — conf
ADARES: A Single-cell Classification Model Based on Adversarial Data Augmentation and Residual Networks.
SPML
Zhi-Peng Zhu, Pengyong Han, Lei Wang, Xishang Dong, San-Rong Liu, Zheng-Wei Li
2023 J jnl
BCMCMI: A Fusion Model for Predicting circRNA-miRNA Interactions Combining Semantic and Meta-path.
J. Chem. Inf. Model.
Mengmeng Wei, Chang-Qing Yu, Li-Ping Li, Zhu-Hong You, Lei Wang
2023 J jnl
Biomedical Knowledge Graph Embedding With Capsule Network for Multi-Label Drug-Drug Interaction Prediction.
IEEE Trans. Knowl. Data Eng.
Xiaorui Su, Zhuhong You, Deshuang Huang, Lei Wang, Leon Wong, Boya Ji, Bowei Zhao
2023 J jnl
GKLOMLI: a link prediction model for inferring miRNA-lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization algorithm.
BMC Bioinform.
Leon Wong, Lei Wang, Zhu-Hong You, Chang-An Yuan, Yu-An Huang, Mei-Yuan Cao
2023 J jnl
MGRCDA: Metagraph Recommendation Method for Predicting CircRNA-Disease Association.
IEEE Trans. Cybern.
Lei Wang, Zhu-Hong You, De-Shuang Huang, Jianqiang Li
2023 J jnl
PPAEDTI: Personalized Propagation Auto-Encoder Model for Predicting Drug-Target Interactions.
IEEE J. Biomed. Health Informatics
Yue-Chao Li, Zhu-Hong You, Changqing Yu, Lei Wang, Leon Wong, Lun Hu, Pengwei Hu, Yu-An Huang
2023 J jnl
Predicting MiRNA-Disease Associations by Graph Representation Learning Based on Jumping Knowledge Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Zheng-Wei Li, Qiankun Wang, Chang-An Yuan, Pengyong Han, Zhu-Hong You, Lei Wang
2023 J jnl
Relation-propagation meta-learning on an explicit preference graph for cold-start recommendation.
Knowl. Based Syst.
Huiting Liu, Lei Wang, Peipei Li, Cheng Qian, Peng Zhao, Xindong Wu
2023 J jnl
SPRDA: a link prediction approach based on the structural perturbation to infer disease-associated Piwi-interacting RNAs.
Briefings Bioinform.
Kai Zheng, Xin-lu Zhang, Lei Wang, Zhu-Hong You, Bo-Ya Ji, Xiao Liang, Zheng-Wei Li
2022 J jnl
A deep learning method for repurposing antiviral drugs against new viruses via multi-view nonnegative matrix factorization and its application to SARS-CoV-2.
Briefings Bioinform.
Xiao-Rui Su, Lun Hu, Zhuhong You, Pengwei Hu, Lei Wang, Bo-Wei Zhao
2022 J jnl
A machine learning framework based on multi-source feature fusion for circRNA-disease association prediction.
Briefings Bioinform.
Lei Wang, Leon Wong, Zheng-Wei Li, Yuan Huang, Xiao-Rui Su, Bo-Wei Zhao, Zhuhong You
2022 J jnl
A novel circRNA-miRNA association prediction model based on structural deep neural network embedding.
Briefings Bioinform.
Lu-Xiang Guo, Zhu-Hong You, Lei Wang, Changqing Yu, Bo-Wei Zhao, Zhong-Hao Ren, Jie Pan
2022 J jnl
HINGRL: predicting drug-disease associations with graph representation learning on heterogeneous information networks.
Briefings Bioinform.
Bo-Wei Zhao, Lun Hu, Zhu-Hong You, Lei Wang, Xiao-Rui Su
2022 J jnl
Line graph attention networks for predicting disease-associated Piwi-interacting RNAs.
Briefings Bioinform.
Kai Zheng, Xin-lu Zhang, Lei Wang, Zhu-Hong You, Zhaohui Zhan, Hao-Yuan Li
2022 J jnl
MNMDCDA: prediction of circRNA-disease associations by learning mixed neighborhood information from multiple distances.
Briefings Bioinform.
Yang Li, Xue-Gang Hu, Lei Wang, Pei-Pei Li, Zhu-Hong You
2022 J jnl
NSECDA: Natural Semantic Enhancement for CircRNA-Disease Association Prediction.
IEEE J. Biomed. Health Informatics
Lei Wang, Leon Wong, Zhu-Hong You, De-Shuang Huang, Xiao-Rui Su, Bo-Wei Zhao
2022 — conf
Predicting circRNA-disease associations using similarity assessing graph convolution from multi-source information networks.
BIBM
Yang Li, Xue-Gang Hu, Pei-Pei Li, Lei Wang, Zhu-Hong You
2022 J jnl
iGRLCDA: identifying circRNA-disease association based on graph representation learning.
Briefings Bioinform.
Hanyuan Zhang, Lei Wang, Zhu-Hong You, Lun Hu, Bo-Wei Zhao, Zheng-Wei Li, Yang-Ming Li
2021 — conf
CNNEMS: Using Convolutional Neural Networks to Predict Drug-Target Interactions by Combining Protein Evolution and Molecular Structures Information.
ICIC (3)
Xin Yan, Zhu-Hong You, Lei Wang, Peng-Peng Chen
2021 J jnl
IMS-CDA: Prediction of CircRNA-Disease Associations From the Integration of Multisource Similarity Information With Deep Stacked Autoencoder Model.
IEEE Trans. Cybern.
Lei Wang, Zhu-Hong You, Jian-Qiang Li, Yu-An Huang
2021 J jnl
LDGRNMF: LncRNA-disease associations prediction based on graph regularized non-negative matrix factorization.
Neurocomputing
Mei-Neng Wang, Zhu-Hong You, Lei Wang, Li-Ping Li, Kai Zheng
2021 J jnl
MISSIM: An Incremental Learning-Based Model With Applications to the Prediction of miRNA-Disease Association.
IEEE ACM Trans. Comput. Biol. Bioinform.
Kai Zheng, Zhu-Hong You, Lei Wang, Yi-Ran Li, Ji-Ren Zhou, Haitao Zeng
2021 J jnl
NMFCDA: Combining randomization-based neural network with non-negative matrix factorization for predicting CircRNA-disease association.
Appl. Soft Comput.
Lei Wang, Zhu-Hong You, Xi Zhou, Xin Yan, Hao-Yuan Li, Yu-An Huang
2021 — conf
Predicting miRNA-Disease Associations via a New MeSH Headings Representation of Diseases and eXtreme Gradient Boosting.
ICIC (3)
Bo-Ya Ji, Zhu-Hong You, Lei Wang, Leon Wong, Xiao-Rui Su, Bo-Wei Zhao
2021 J jnl
Predicting microRNA-disease associations from lncRNA-microRNA interactions via Multiview Multitask Learning.
Briefings Bioinform.
Yu-An Huang, Keith C. C. Chan, Zhu-Hong You, Pengwei Hu, Lei Wang, Zhi-An Huang
2021 J jnl
SANE: A sequence combined attentive network embedding model for COVID-19 drug repositioning.
Appl. Soft Comput.
Xiao-Rui Su, Zhuhong You, Lei Wang, Lun Hu, Leon Wong, Boya Ji, Bo-Wei Zhao
2021 J jnl
SGANRDA: semi-supervised generative adversarial networks for predicting circRNA-disease associations.
Briefings Bioinform.
Lei Wang, Xin Yan, Zhu-Hong You, Xi Zhou, Hao-Yuan Li, Yu-An Huang
2020 J jnl
An efficient approach based on multi-sources information to predict circRNA-disease associations using deep convolutional neural network.
Bioinform.
Lei Wang, Zhu-Hong You, Yu-An Huang, De-Shuang Huang, Keith C. C. Chan
2020 J jnl
Combining High Speed ELM Learning with a Deep Convolutional Neural Network Feature Encoding for Predicting Protein-RNA Interactions.
IEEE ACM Trans. Comput. Biol. Bioinform.
Lei Wang, Zhu-Hong You, De-Shuang Huang, Fengfeng Zhou
2020 — conf
DTIFS: A Novel Computational Approach for Predicting Drug-Target Interactions from Drug Structure and Protein Sequence.
ICIC (2)
Xin Yan, Zhu-Hong You, Lei Wang, Li-Ping Li, Kai Zheng, Mei-Neng Wang
2020 J jnl
GANCDA: a novel method for predicting circRNA-disease associations based on deep generative adversarial network.
Int. J. Data Min. Bioinform.
Xin Yan, Lei Wang, Zhu-Hong You, Li-Ping Li, Kai Zheng
2020 J jnl
GCNCDA: A new method for predicting circRNA-disease associations based on Graph Convolutional Network Algorithm.
PLoS Comput. Biol.
Lei Wang, Zhu-Hong You, Yang-Ming Li, Kai Zheng, Yu-An Huang
2020 — conf
GCNSP: A Novel Prediction Method of Self-Interacting Proteins Based on Graph Convolutional Networks.
ICIC (2)
Lei Wang, Zhu-Hong You, Xin Yan, Kai Zheng, Zheng-Wei Li
2020 — conf
Image Classification Based on Deep Belief Network and YELM.
ICIC (1)
Chengyong Zhang, Zhengwei Li, Ru Nie, Lei Wang, Huan Zhao
2020 — conf
Inferring Disease-Associated Piwi-Interacting RNAs via Graph Attention Networks.
ICIC (2)
Kai Zheng, Zhu-Hong You, Lei Wang, Leon Wong, Zhan-Heng Chen
2020 — conf
Predicting Human Disease-Associated piRNAs Based on Multi-source Information and Random Forest.
ICIC (2)
Kai Zheng, Zhu-Hong You, Lei Wang, Hao-Yuan Li, Bo-Ya Ji
2020 J jnl
iCDA-CGR: Identification of circRNA-disease associations based on Chaos Game Representation.
PLoS Comput. Biol.
Kai Zheng, Zhu-Hong You, Jian-Qiang Li, Lei Wang, Zhen-Hao Guo, Yu-An Huang
2019 J jnl
CGMDA: An Approach to Predict and Validate MicroRNA-Disease Associations by Utilizing Chaos Game Representation and LightGBM.
IEEE Access
Kai Zheng, Lei Wang, Zhu-Hong You
2019 J jnl
LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities.
PLoS Comput. Biol.
Lei Wang, Zhu-Hong You, Xing Chen, Yang-Ming Li, Ya-Nan Dong, Li-Ping Li, Kai Zheng
2019 — conf
MISSIM: Improved miRNA-Disease Association Prediction Model Based on Chaos Game Representation and Broad Learning System.
ICIC (3)
Kai Zheng, Zhu-Hong You, Lei Wang, Yi-Ran Li, Yan-Bin Wang, Han-Jing Jiang
2019 — conf
Precise Prediction of Pathogenic Microorganisms Using 16S rRNA Gene Sequences.
ICIC (2)
Yu-An Huang, Zhi-An Huang, Zhu-Hong You, Pengwei Hu, Li-Ping Li, Zheng-Wei Li, Lei Wang
2019 — conf
Predicting circRNA-disease associations using deep generative adversarial network based on multi-source fusion information.
BIBM
Lei Wang, Zhu-Hong You, Li-Ping Li, Kai Zheng, Yan-Bin Wang
2018 J jnl
A Computational-Based Method for Predicting Drug-Target Interactions by Using Stacked Autoencoder Deep Neural Network.
J. Comput. Biol.
Lei Wang, Zhu-Hong You, Xing Chen, Shixiong Xia, Feng Liu, Xin Yan, Yong Zhou, Kejian Song
2018 J jnl
An improved efficient rotation forest algorithm to predict the interactions among proteins.
Soft Comput.
Lei Wang, Zhu-Hong You, Shixiong Xia, Xing Chen, Xin Yan, Yong Zhou, Feng Liu
2018 J jnl
BNPMDA: Bipartite Network Projection for MiRNA-Disease Association prediction.
Bioinform.
Xing Chen, Di Xie, Lei Wang, Qi Zhao, Zhu-Hong You, Hongsheng Liu
2018 J jnl
Predicting miRNA-disease association based on inductive matrix completion.
Bioinform.
Xing Chen, Lei Wang, Jia Qu, Na-Na Guan, Jian-Qiang Li
2017 — conf
Computational Methods for the Prediction of Drug-Target Interactions from Drug Fingerprints and Protein Sequences by Stacked Auto-Encoder Deep Neural Network.
ISBRA
Lei Wang, Zhu-Hong You, Xing Chen, Shixiong Xia, Feng Liu, Xin Yan, Yong Zhou