Lee Cooper

32 papers A 1B 1Misc 2Journal 10Unranked 14
YearRankTypeTitle / Venue / Authors
2023 — conf
Deep learning to predict the proportion of positive cells in CMYC-stained tissue microarrays of diffuse large B-cell lymphoma.
Digital and Computational Pathology
Thomas E. Tavolara, M. Khalid Khan Niazi, David Jaye, Christopher Flowers, Lee Cooper, Metin N. Gurcan
2023 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2022, Grenoble, France, September 19-23, 2022, Proceedings, Part I
PKDD/ECML Workshops (1)
Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita P. Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew W. Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana Miranda, Konstantinos Sechidis, Arif Canakoglu, Sara Pidò, Pietro Pinoli, Albert Bifet, Sepideh Pashami
2023 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2022, Grenoble, France, September 19-23, 2022, Proceedings, Part II
PKDD/ECML Workshops (2)
Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita P. Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew W. Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana Miranda, Konstantinos Sechidis, Arif Canakoglu, Sara Pidò, Pietro Pinoli, Albert Bifet, Sepideh Pashami
2021 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2021, Virtual Event, September 13-17, 2021, Proceedings, Part I
PKDD/ECML Workshops (1)
Michael Kamp, Irena Koprinska, Adrien Bibal, Tassadit Bouadi, Benoît Frénay, Luis Galárraga, José Oramas, Linara Adilova, Yamuna Krishnamurthy, Bo Kang, Christine Largeron, Jefrey Lijffijt, Tiphaine Viard, Pascal Welke, Massimiliano Ruocco, Erlend Aune, Claudio Gallicchio, Gregor Schiele, Franz Pernkopf, Michaela Blott, Holger Fröning, Günther Schindler, Riccardo Guidotti, Anna Monreale, Salvatore Rinzivillo, Przemyslaw Biecek, Eirini Ntoutsi, Mykola Pechenizkiy, Bodo Rosenhahn, Christopher L. Buckley, Daniela Cialfi, Pablo Lanillos, Maxwell Ramstead, Tim Verbelen, Pedro M. Ferreira, Giuseppina Andresini, Donato Malerba, Ibéria Medeiros, Philippe Fournier-Viger, M. Saqib Nawaz, Sebastián Ventura, Meng Sun, Min Zhou, Valerio Bitetta, Ilaria Bordino, Andrea Ferretti, Francesco Gullo, Giovanni Ponti, Lorenzo Severini, Rita P. Ribeiro, João Gama, Ricard Gavaldà, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Damian Roqueiro, Diego Saldana Miranda, Konstantinos Sechidis, Guilherme Graça
2021 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2021, Virtual Event, September 13-17, 2021, Proceedings, Part II
PKDD/ECML Workshops (2)
Michael Kamp, Irena Koprinska, Adrien Bibal, Tassadit Bouadi, Benoît Frénay, Luis Galárraga, José Oramas, Linara Adilova, Yamuna Krishnamurthy, Bo Kang, Christine Largeron, Jefrey Lijffijt, Tiphaine Viard, Pascal Welke, Massimiliano Ruocco, Erlend Aune, Claudio Gallicchio, Gregor Schiele, Franz Pernkopf, Michaela Blott, Holger Fröning, Günther Schindler, Riccardo Guidotti, Anna Monreale, Salvatore Rinzivillo, Przemyslaw Biecek, Eirini Ntoutsi, Mykola Pechenizkiy, Bodo Rosenhahn, Christopher L. Buckley, Daniela Cialfi, Pablo Lanillos, Maxwell Ramstead, Tim Verbelen, Pedro M. Ferreira, Giuseppina Andresini, Donato Malerba, Ibéria Medeiros, Philippe Fournier-Viger, M. Saqib Nawaz, Sebastián Ventura, Meng Sun, Min Zhou, Valerio Bitetta, Ilaria Bordino, Andrea Ferretti, Francesco Gullo, Giovanni Ponti, Lorenzo Severini, Rita P. Ribeiro, João Gama, Ricard Gavaldà, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Damian Roqueiro, Diego Saldana Miranda, Konstantinos Sechidis, Guilherme Graça
2019 — conf
An Ensemble-based Active Learning for Breast Cancer Classification.
BIBM
Sanghoon Lee, Mohamed Amgad, Mohamed Masoud, Rajasekaran Subramanian, David A. Gutman, Lee Cooper
2018 — conf
Vectorized persistent homology representations for characterizing glandular architecture in histology images.
ISBI
Deepak Roy Chittajallu, Neal Siekierski, Sanghoon Lee, Samuel Gerber, Jonathan D. Beezley, David Manthey, David A. Gutman, Lee Cooper
2016 J jnl
Learning Genomic Representations to Predict Clinical Outcomes in Cancer.
CoRR
Safoora Yousefi, Congzheng Song, Nelson Nauata, Lee Cooper
2016 Misc conf
Quantitative Imaging and Imaging Informatics in the Era of Precision Medicine.
AMIA
Lee Cooper, Jayashree Kalpathy-Cramer, William Hsu, Ashish Sharma
2015 J jnl
Scalable analysis of Big pathology image data cohorts using efficient methods and high-performance computing strategies.
BMC Bioinform.
Tahsin M. Kurç, Xin Qi, Daihou Wang, Fusheng Wang, George Teodoro, Lee Cooper, Michael Nalisnik, Lin Yang, Joel H. Saltz, David J. Foran
2015 — conf
Spatiotemporal visualization of cell membrane dynamics and protein colocalization reveals correlation between membrane dynamics and metastatic invasion.
BCB
Yue Hou, Lee Cooper, Scott Wilkinson, Adam I. Marcus, Daniel J. Brat
2014 A conf
Comparative Performance Analysis of Intel (R) Xeon Phi (TM), GPU, and CPU: A Case Study from Microscopy Image Analysis.
IPDPS
George Teodoro, Tahsin M. Kurç, Jun Kong, Lee Cooper, Joel H. Saltz
2014 J jnl
Region Templates: Data Representation and Management for Large-Scale Image Analysis.
CoRR
George Teodoro, Tony Pan, Tahsin M. Kurç, Jun Kong, Lee Cooper, Scott Klasky, Joel H. Saltz
2014 J jnl
Region templates: Data representation and management for high-throughput image analysis.
Parallel Comput.
George Teodoro, Tony Pan, Tahsin M. Kurç, Jun Kong, Lee Cooper, Scott Klasky, Joel H. Saltz
2013 J jnl
Comparative Performance Analysis of Intel Xeon Phi, GPU, and CPU.
CoRR
George Teodoro, Tahsin M. Kurç, Jun Kong, Lee Cooper, Joel H. Saltz
2013 — conf
High-performance computational analysis of glioblastoma pathology images with database support identifies molecular and survival correlates.
BIBM
Jun Kong, Fusheng Wang, George Teodoro, Lee Cooper, Carlos Sanchez Moreno, Tahsin M. Kurç, Tony Pan, Joel H. Saltz, Daniel J. Brat
2012 J jnl
Efficient Irregular Wavefront Propagation Algorithms on Hybrid CPU-GPU Machines
CoRR
George Teodoro, Tony Pan, Tahsin M. Kurç, Jun Kong, Lee Cooper, Joel H. Saltz
2012 — conf
ZPEG: A hybrid DPCM-DCT based approach for compression of Z-stack images.
EMBC
Sourabh Khire, Lee Cooper, Yuna Park, Alexis B. Carter, Nikil Jayant, Joel H. Saltz
2011 — conf
A comprehensive framework for classification of nuclei in digital microscopy imaging: An application to diffuse gliomas.
ISBI
Jun Kong, Lee Cooper, Fusheng Wang, Candace Chisolm, Carlos Sanchez Moreno, Tahsin M. Kurç, Patrick M. Widener, Daniel J. Brat, Joel H. Saltz
2011 B conf
A new steerable pressure force for parametric deformable models.
Image Processing
Jun Kong, Lee Cooper, Ashish Sharma, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz
2011 — conf
In silico analysis of nuclei in glioblastoma using large-scale microscopy images improves prediction of treatment response.
EMBC
Jun Kong, Lee Cooper, Carlos Sanchez Moreno, Fusheng Wang, Tahsin M. Kurç, Joel H. Saltz, Daniel J. Brat
2011 — conf
Parallel Automatic Registration of Large Scale Microscopic Images on Multiprocessor CPUs and GPUs.
IPDPS Workshops
Lee Cooper, Kun Huang, Manuel Ujaldon
2011 — conf
Towards building computerized image analysis framework for nucleus discrimination in microscopy images of diffuse glioma.
EMBC
Jun Kong, Lee Cooper, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz
2010 — conf
High Performance Computing Techniques for Scaling Image Analysis Workflows.
PARA (2)
Patrick M. Widener, Tahsin M. Kurç, Wenjin Chen, Fusheng Wang, Lin Yang, Jun Hu, Vijay Kumar, Vicky Chu, Lee Cooper, Jun Kong, Ashish Sharma, Tony Pan, Joel H. Saltz, David J. Foran
2010 — conf
High-Performance Systems for in Silico Microscopy Imaging Studies.
DILS
Fusheng Wang, Tahsin M. Kurç, Patrick M. Widener, Tony Pan, Jun Kong, Lee Cooper, David A. Gutman, Ashish Sharma, Sharath R. Cholleti, Vijay Kumar
2010 Misc conf
Texture based image recognition in microscopy images of diffuse gliomas with multi-class gentle boosting mechanism.
ICASSP
Jun Kong, Lee Cooper, Ashish Sharma, Tahsin M. Kurç, Daniel J. Brat, Joel H. Saltz
2010 — conf
Two-point correlation as a feature for histology images: Feature space structure and correlation updating.
CVPR Workshops
Lee Cooper, Joel H. Saltz, Raghu Machiraju, Kun Huang
2009 J jnl
Feature-based registration of histopathology images with different stains: An application for computerized follicular lymphoma prognosis.
Comput. Methods Programs Biomed.
Lee Cooper, Olcay Sertel, Jun Kong, Gerard Lozanski, Kun Huang, Metin N. Gurcan
2009 J jnl
Non-rigid Registration for Large Sets of Microscopic Images on Graphics Processors.
J. Signal Process. Syst.
Antonio Ruiz, Manuel Ujaldon, Lee Cooper, Kun Huang
2008 J jnl
An imaging workflow for characterizing phenotypical change in large histological mouse model datasets.
J. Biomed. Informatics
Kishore Mosaliganti, Tony Pan, Randall Ridgway, Richard Sharp, Lee Cooper, Alex Gulacy, Ashish Sharma, M. Okan Irfanoglu, Raghu Machiraju, Tahsin M. Kurç, Alain de Bruin, Pamela Wenzel, Gustavo Leone, Joel H. Saltz, Kun Huang
2008 J jnl
Reconstruction of Cellular Biological Structures from Optical Microscopy Data.
IEEE Trans. Vis. Comput. Graph.
Kishore Mosaliganti, Lee Cooper, Richard Sharp, Raghu Machiraju, Gustavo Leone, Kun Huang, Joel H. Saltz
2006 — conf
Spatial Segmentation of Temporal Texture Using Mixture Linear Models.
WDV
Lee Cooper, Jun Liu, Kun Huang