Le Ou-Yang

81 papers A* 2A 1B 1Misc 3Journal 69Unranked 5
YearRankTypeTitle / Venue / Authors
2026 J jnl
FEQIN: A feature-enhanced query interaction network for breast ultrasound segmentation.
Pattern Recognit.
Xiling Luo, Le Ou-Yang
2026 J jnl
Identifying spatial domains from spatial multi-omics data using consistent and specific deep subspace learning.
Inf. Fusion
Guangchang Cai, Fuqun Chen, Ke-Pei Wen, Ying Li, Le Ou-Yang
2026 J jnl
LGFFM: A Localized and Globalized Frequency Fusion Model for Ultrasound Image Segmentation.
IEEE Trans. Medical Imaging
Xiling Luo, Yi Wang, Le Ou-Yang
2026 J jnl
LineGRN: A Line Graph Neural Network for Gene Regulatory Network Inference.
IEEE J. Biomed. Health Informatics
Ziwei Wang, Ge Xu, Weiming Yu, Le Ou-Yang
2026 J jnl
SeOMLR: one-step multi-view latent representation with self-weighted ensemble learning for multi-omics cancer subtyping.
Bioinform.
Wenjing Song, Yesen Sun, Le Ou-Yang
2025 A* conf
DUIMC: Deep Unbalanced Incomplete Multi-View Clustering via Graph Constrained Imputation and Contrastive Learning.
ACM Multimedia
Wenhui Wu, Guanqi Wen, Le Ou-Yang, Ran Wang, Sam Kwong
2025 J jnl
GCLink: a graph contrastive link prediction framework for gene regulatory network inference.
Bioinform.
Weiming Yu, Zerun Lin, Miaofang Lan, Le Ou-Yang
2025 J jnl
GRESS: Grouping Belief-Based Deep Contrastive Subspace Clustering.
IEEE Trans. Cybern.
Yujie Chen, Wenhui Wu, Le Ou-Yang, Ran Wang, Sam Kwong
2025 A* conf
GeCC: Generalized Contrastive Clustering with Domain Shifts Modeling.
AAAI
Yujie Chen, Wenhui Wu, Le Ou-Yang, Ran Wang, Debby Dan Wang
2025 J jnl
Reinforcement learning-guided sample selection for improved identification of phage receptor binding proteins.
Briefings Bioinform.
Xiling Luo, Le Ou-Yang, Yang Shen, Yanni Sun, Jiayu Shang
2025 J jnl
SpaFusion: A multi-level fusion model for clustering spatial multi-omics data.
Inf. Fusion
Fuqun Chen, Guangchang Cai, Ying Li, Le Ou-Yang
2024 J jnl
Clustering single-cell multi-omics data via graph regularized multi-view ensemble learning.
Bioinform.
Fuqun Chen, Guanhua Zou, Yongxian Wu, Le Ou-Yang
2024 J jnl
Equivariant Line Graph Neural Network for Protein-Ligand Binding Affinity Prediction.
IEEE J. Biomed. Health Informatics
Yiqiang Yi, Xu Wan, Kangfei Zhao, Le Ou-Yang, Peilin Zhao
2024 J jnl
MARS: a motif-based autoregressive model for retrosynthesis prediction.
Bioinform.
Jiahan Liu, Chaochao Yan, Yang Yu, Chan Lu, Junzhou Huang, Le Ou-Yang, Peilin Zhao
2024 — conf
Pathway Activity Autoencoders for Enhanced Omics Analysis and Clinical Interpretability.
BIBM
Pedro Henrique da Costa Avelar, Le Ou-Yang, Min Wu, Sophia Tsoka
2024 Misc conf
SCDMSC: Deep Multi-View Subspace Clustering for Single-Cell Multi-Omics Data.
ICMLC
Ke-Pei Wen, Ying Li, Le Ou-Yang
2023 J jnl
A partially shared joint clustering framework for detecting protein complexes from multiple state-specific signed interaction networks.
Comput. Biol. Medicine
Youlin Zhan, Jiahan Liu, Min Wu, Chris Soon Heng Tan, Xiaoli Li, Le Ou-Yang
2023 Misc conf
Contrastive Subspace Clustering with Dissimilarity Regularization.
ICMLC
Yu-Jie Chen, Wenhui Wu, Le Ou-Yang
2023 J jnl
ETDock: A Novel Equivariant Transformer for Protein-Ligand Docking.
CoRR
Yiqiang Yi, Xu Wan, Yatao Bian, Le Ou-Yang, Peilin Zhao
2023 J jnl
Inferring gene regulatory networks from single-cell gene expression data via deep multi-view contrastive learning.
Briefings Bioinform.
Zerun Lin, Le Ou-Yang
2023 A conf
MoVAE: A Variational AutoEncoder for Molecular Graph Generation.
SDM
Zerun Lin, Yuhan Zhang, Lixin Duan, Le Ou-Yang, Peilin Zhao
2023 J jnl
Reading Multilevel 2-D Barcodes Using a Machine Learning Approach.
IEEE Internet Things J.
Jiaheng Zhang, Junjie Chen, Le Ou-Yang, Changsheng Chen, Ning Xie
2023 J jnl
Self-representative kernel concept factorization.
Knowl. Based Syst.
Wenhui Wu, Yujie Chen, Ran Wang, Le Ou-Yang
2023 J jnl
scMIC: A Deep Multi-Level Information Fusion Framework for Clustering Single-Cell Multi-Omics Data.
IEEE J. Biomed. Health Informatics
Youlin Zhan, Jiahan Liu, Le Ou-Yang
2023 J jnl
scTSSR2: Imputing Dropout Events for Single-Cell RNA Sequencing Using Fast Two-Side Self-Representation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Bo Li, Ke Jin, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2022 J jnl
Anderson accelerating the preconditioned modulus approach for linear complementarity problems on second-order cones.
Numer. Algorithms
Zhizhi Li, Huai Zhang, Yimin Jin, Le Ou-Yang
2022 J jnl
DEMOC: a deep embedded multi-omics learning approach for clustering single-cell CITE-seq data.
Briefings Bioinform.
Guanhua Zou, Yilong Lin, Tianyang Han, Le Ou-Yang
2022 J jnl
Identifying Gene Network Rewiring Based on Partial Correlation.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yuting Tan, Le Ou-Yang, Xingpeng Jiang, Hong Yan, Xiao-Fei Zhang
2022 J jnl
Inferring Gene Co-Expression Networks by Incorporating Prior Protein-Protein Interaction Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Meng-Guo Wang, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2022 J jnl
MARS: A Motif-based Autoregressive Model for Retrosynthesis Prediction.
CoRR
Jiahan Liu, Chaochao Yan, Yang Yu, Chan Lu, Junzhou Huang, Le Ou-Yang, Peilin Zhao
2022 J jnl
Matrix factorization for biomedical link prediction and scRNA-seq data imputation: an empirical survey.
Briefings Bioinform.
Le Ou-Yang, Fan Lu, Zi-Chao Zhang, Min Wu
2022 J jnl
Predicting Protein-Ligand Binding Affinity with Equivariant Line Graph Network.
CoRR
Yiqiang Yi, Xu Wan, Kangfei Zhao, Le Ou-Yang, Peilin Zhao
2022 J jnl
scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning.
Briefings Bioinform.
Hui-Sheng Li, Le Ou-Yang, Yuan Zhu, Hong Yan, Xiao-Fei Zhang
2021 J jnl
A Joint Graphical Model for Inferring Gene Networks Across Multiple Subpopulations and Data Types.
IEEE Trans. Cybern.
Xiao-Fei Zhang, Le Ou-Yang, Ting Yan, Xiaohua Tony Hu, Hong Yan
2021 J jnl
Differential network analysis by simultaneously considering changes in gene interactions and gene expression.
Bioinform.
Jia-Juan Tu, Le Ou-Yang, Yuan Zhu, Hong Yan, Hong Qin, Xiao-Fei Zhang
2021 J jnl
EnTSSR: A Weighted Ensemble Learning Method to Impute Single-Cell RNA Sequencing Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Fan Lu, Yilong Lin, Chongbin Yuan, Xiao-Fei Zhang, Le Ou-Yang
2021 J jnl
Recent advances in network-based methods for disease gene prediction.
Briefings Bioinform.
Sezin Kircali Ata, Min Wu, Yuan Fang, Le Ou-Yang, Chee Keong Kwoh, Xiaoli Li
2021 Misc conf
Semantic Hierarchy Preserving Deep Hashing for Large-Scale Image Retrieval.
MVA
Ming Zhang, Xuefei Zhe, Le Ou-Yang, Shifeng Chen, Hong Yan
2021 J jnl
The selection of the optimal parameter in the modulus-based matrix splitting algorithm for linear complementarity problems.
Comput. Optim. Appl.
Zhizhi Li, Huai Zhang, Le Ou-Yang
2021 J jnl
Time-Varying Differential Network Analysis for Revealing Network Rewiring over Cancer Progression.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ting Xu, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2021 J jnl
WDNE: an integrative graphical model for inferring differential networks from multi-platform gene expression data with missing values.
Briefings Bioinform.
Le Ou-Yang, Dehan Cai, Xiao-Fei Zhang, Hong Yan
2021 J jnl
WMLRR: A Weighted Multi-View Low Rank Representation to Identify Cancer Subtypes From Multiple Types of Omics Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Yesen Sun, Le Ou-Yang, Dao-Qing Dai
2020 J jnl
A Machine Learning Approach to Blind Multi-Path Classification for Massive MIMO Systems.
IEEE/ACM Trans. Netw.
Ning Xie, Le Ou-Yang, Alex X. Liu
2020 J jnl
A Machine Learning Approach to Phase Reference Estimation With Noise.
IEEE Trans. Commun.
Ning Xie, Le Ou-Yang, Alex X. Liu
2020 J jnl
A graph regularized generalized matrix factorization model for predicting links in biomedical bipartite networks.
Bioinform.
Zi-Chao Zhang, Xiao-Fei Zhang, Min Wu, Le Ou-Yang, Xing-Ming Zhao, Xiaoli Li
2020 J jnl
Differential Network Analysis via Weighted Fused Conditional Gaussian Graphical Model.
IEEE ACM Trans. Comput. Biol. Bioinform.
Le Ou-Yang, Xiao-Fei Zhang, Xiaohua Hu, Hong Yan
2020 J jnl
Identifying Gene Network Rewiring Using Robust Differential Graphical Model with Multivariate $t$t-Distribution.
IEEE ACM Trans. Comput. Biol. Bioinform.
Rui Yuan, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2020 J jnl
Joint reconstruction of multiple gene networks by simultaneously capturing inter-tumor and intra-tumor heterogeneity.
Bioinform.
Jia-Juan Tu, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang, Hong Qin
2020 J jnl
Recent Advances in Network-based Methods for Disease Gene Prediction.
CoRR
Sezin Kircali Ata, Min Wu, Yuan Fang, Le Ou-Yang, Chee Keong Kwoh, Xiaoli Li
2020 J jnl
Self-weighted adaptive structure learning for ASD diagnosis via multi-template multi-center representation.
Medical Image Anal.
Fanglin Huang, Ee-Leng Tan, Peng Yang, Shan Huang, Le Ou-Yang, Jiuwen Cao, Tianfu Wang, Baiying Lei
2020 J jnl
Sparse regularized low-rank tensor regression with applications in genomic data analysis.
Pattern Recognit.
Le Ou-Yang, Xiao-Fei Zhang, Hong Yan
2020 J jnl
Spectrum Sharing in mmWave Cellular Networks Using Clustering Algorithms.
IEEE/ACM Trans. Netw.
Ning Xie, Le Ou-Yang, Alex X. Liu
2020 J jnl
scTSSR: gene expression recovery for single-cell RNA sequencing using two-side sparse self-representation.
Bioinform.
Ke Jin, Le Ou-Yang, Xing-Ming Zhao, Hong Yan, Xiao-Fei Zhang
2019 J jnl
DiffNetFDR: differential network analysis with false discovery rate control.
Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xiaohua Hu, Hong Yan
2019 J jnl
EnImpute: imputing dropout events in single-cell RNA-sequencing data via ensemble learning.
Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xing-Ming Zhao, Xiaohua Hu, Hong Yan
2019 — conf
Graph Convolutional Network Analysis for Mild Cognitive Impairment Prediction.
ISBI
Xin Zhao, Feng Zhou, Le Ou-Yang, Tianfu Wang, Baiying Lei
2019 B conf
Improve L2-normalized Softmax with Exponential Moving Average.
IJCNN
Xuefei Zhe, Le Ou-Yang, Hong Yan
2019 J jnl
Inferring Gene Network Rewiring by Combining Gene Expression and Gene Mutation Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jia-Juan Tu, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2019 J jnl
Joint Learning of Multiple Differential Networks With Latent Variables.
IEEE Trans. Cybern.
Le Ou-Yang, Xiao-Fei Zhang, Xing-Ming Zhao, Debby Dan Wang, Fu Lee Wang, Baiying Lei, Hong Yan
2019 — conf
Multi-template Based Auto-Weighted Adaptive Structural Learning for ASD Diagnosis.
MLMI@MICCAI
Fanglin Huang, Peng Yang, Shan Huang, Le Ou-Yang, Tianfu Wang, Baiying Lei
2019 J jnl
Predicting synthetic lethal interactions in human cancers using graph regularized self-representative matrix factorization.
BMC Bioinform.
Jiang Huang, Min Wu, Fan Lu, Le Ou-Yang, Zexuan Zhu
2019 J jnl
Semantic Hierarchy Preserving Deep Hashing for Large-scale Image Retrieval.
CoRR
Xuefei Zhe, Le Ou-Yang, Shifeng Chen, Hong Yan
2019 — conf
Sparse Low-rank Constrained Adaptive Structure Learning using Multi-template for Autism Spectrum Disorder Diagnosis.
ISBI
Fanglin Huang, Ahmed El-Azab, Le Ou-Yang, Joseph Tan, Tianfu Wang, Baiying Lei
2018 J jnl
DiffGraph: an R package for identifying gene network rewiring using differential graphical models.
Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xiaohua Hu, Hong Yan
2018 J jnl
Identifying Gene Network Rewiring by Integrating Gene Expression and Gene Network Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Ting Xu, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2018 J jnl
RepLong: de novo repeat identification using long read sequencing data.
Bioinform.
Rui Guo, Yan-Ran Li, Shan He, Le Ou-Yang, Yiwen Sun, Zexuan Zhu
2017 J jnl
A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
BMC Bioinform.
Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2017 J jnl
Incorporating prior information into differential network analysis using non-paranormal graphical models.
Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Hong Yan
2017 J jnl
Node-based differential network analysis in genomics.
Comput. Biol. Chem.
Xiao-Fei Zhang, Le Ou-Yang, Hong Yan
2017 J jnl
Protein Complex Detection via Effective Integration of Base Clustering Solutions and Co-Complex Affinity Scores.
IEEE ACM Trans. Comput. Biol. Bioinform.
Min Wu, Le Ou-Yang, Xiaoli Li
2016 J jnl
A two-layer integration framework for protein complex detection.
BMC Bioinform.
Le Ou-Yang, Min Wu, Xiao-Fei Zhang, Dao-Qing Dai, Xiaoli Li, Hong Yan
2016 J jnl
Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks.
BMC Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Hong Yan
2016 — conf
Identifying protein complexes via multi-network clustering.
BIBM
Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2016 J jnl
Protein complex detection based on partially shared multi-view clustering.
BMC Bioinform.
Le Ou-Yang, Xiao-Fei Zhang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Zhiyong Liu, Hong Yan
2016 J jnl
Regularized logistic regression with network-based pairwise interaction for biomarker identification in breast cancer.
BMC Bioinform.
Meng-Yun Wu, Xiao-Fei Zhang, Dao-Qing Dai, Le Ou-Yang, Yuan Zhu, Hong Yan
2015 J jnl
Detecting Protein Complexes from Signed Protein-Protein Interaction Networks.
IEEE ACM Trans. Comput. Biol. Bioinform.
Le Ou-Yang, Dao-Qing Dai, Xiao-Fei Zhang
2015 J jnl
Determining minimum set of driver nodes in protein-protein interaction networks.
BMC Bioinform.
Xiao-Fei Zhang, Le Ou-Yang, Yuan Zhu, Meng-Yun Wu, Dao-Qing Dai
2014 J jnl
Detecting overlapping protein complexes based on a generative model with functional and topological properties.
BMC Bioinform.
Xiao-Fei Zhang, Dao-Qing Dai, Le Ou-Yang, Hong Yan
2014 J jnl
Detecting temporal protein complexes from dynamic protein-protein interaction networks.
BMC Bioinform.
Le Ou-Yang, Dao-Qing Dai, Xiaoli Li, Min Wu, Xiao-Fei Zhang, Peng Yang
2014 J jnl
Microbial community pattern detection in human body habitats via ensemble clustering framework.
BMC Syst. Biol.
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
2014 J jnl
Microbial community pattern detection in human body habitats via ensemble clustering framework.
CoRR
Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning