Le Ou-Yang - RankMe

81 papers A* 2A 1B 1Misc 3Journal 69Unranked 5

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	FEQIN: A feature-enhanced query interaction network for breast ultrasound segmentation. Pattern Recognit. Xiling Luo, Le Ou-Yang
2026	J	`jnl`	Identifying spatial domains from spatial multi-omics data using consistent and specific deep subspace learning. Inf. Fusion Guangchang Cai, Fuqun Chen, Ke-Pei Wen, Ying Li, Le Ou-Yang
2026	J	`jnl`	LGFFM: A Localized and Globalized Frequency Fusion Model for Ultrasound Image Segmentation. IEEE Trans. Medical Imaging Xiling Luo, Yi Wang, Le Ou-Yang
2026	J	`jnl`	LineGRN: A Line Graph Neural Network for Gene Regulatory Network Inference. IEEE J. Biomed. Health Informatics Ziwei Wang, Ge Xu, Weiming Yu, Le Ou-Yang
2026	J	`jnl`	SeOMLR: one-step multi-view latent representation with self-weighted ensemble learning for multi-omics cancer subtyping. Bioinform. Wenjing Song, Yesen Sun, Le Ou-Yang
2025	A*	`conf`	DUIMC: Deep Unbalanced Incomplete Multi-View Clustering via Graph Constrained Imputation and Contrastive Learning. ACM Multimedia Wenhui Wu, Guanqi Wen, Le Ou-Yang, Ran Wang, Sam Kwong
2025	J	`jnl`	GCLink: a graph contrastive link prediction framework for gene regulatory network inference. Bioinform. Weiming Yu, Zerun Lin, Miaofang Lan, Le Ou-Yang
2025	J	`jnl`	GRESS: Grouping Belief-Based Deep Contrastive Subspace Clustering. IEEE Trans. Cybern. Yujie Chen, Wenhui Wu, Le Ou-Yang, Ran Wang, Sam Kwong
2025	A*	`conf`	GeCC: Generalized Contrastive Clustering with Domain Shifts Modeling. AAAI Yujie Chen, Wenhui Wu, Le Ou-Yang, Ran Wang, Debby Dan Wang
2025	J	`jnl`	Reinforcement learning-guided sample selection for improved identification of phage receptor binding proteins. Briefings Bioinform. Xiling Luo, Le Ou-Yang, Yang Shen, Yanni Sun, Jiayu Shang
2025	J	`jnl`	SpaFusion: A multi-level fusion model for clustering spatial multi-omics data. Inf. Fusion Fuqun Chen, Guangchang Cai, Ying Li, Le Ou-Yang
2024	J	`jnl`	Clustering single-cell multi-omics data via graph regularized multi-view ensemble learning. Bioinform. Fuqun Chen, Guanhua Zou, Yongxian Wu, Le Ou-Yang
2024	J	`jnl`	Equivariant Line Graph Neural Network for Protein-Ligand Binding Affinity Prediction. IEEE J. Biomed. Health Informatics Yiqiang Yi, Xu Wan, Kangfei Zhao, Le Ou-Yang, Peilin Zhao
2024	J	`jnl`	MARS: a motif-based autoregressive model for retrosynthesis prediction. Bioinform. Jiahan Liu, Chaochao Yan, Yang Yu, Chan Lu, Junzhou Huang, Le Ou-Yang, Peilin Zhao
2024	—	`conf`	Pathway Activity Autoencoders for Enhanced Omics Analysis and Clinical Interpretability. BIBM Pedro Henrique da Costa Avelar, Le Ou-Yang, Min Wu, Sophia Tsoka
2024	Misc	`conf`	SCDMSC: Deep Multi-View Subspace Clustering for Single-Cell Multi-Omics Data. ICMLC Ke-Pei Wen, Ying Li, Le Ou-Yang
2023	J	`jnl`	A partially shared joint clustering framework for detecting protein complexes from multiple state-specific signed interaction networks. Comput. Biol. Medicine Youlin Zhan, Jiahan Liu, Min Wu, Chris Soon Heng Tan, Xiaoli Li, Le Ou-Yang
2023	Misc	`conf`	Contrastive Subspace Clustering with Dissimilarity Regularization. ICMLC Yu-Jie Chen, Wenhui Wu, Le Ou-Yang
2023	J	`jnl`	ETDock: A Novel Equivariant Transformer for Protein-Ligand Docking. CoRR Yiqiang Yi, Xu Wan, Yatao Bian, Le Ou-Yang, Peilin Zhao
2023	J	`jnl`	Inferring gene regulatory networks from single-cell gene expression data via deep multi-view contrastive learning. Briefings Bioinform. Zerun Lin, Le Ou-Yang
2023	A	`conf`	MoVAE: A Variational AutoEncoder for Molecular Graph Generation. SDM Zerun Lin, Yuhan Zhang, Lixin Duan, Le Ou-Yang, Peilin Zhao
2023	J	`jnl`	Reading Multilevel 2-D Barcodes Using a Machine Learning Approach. IEEE Internet Things J. Jiaheng Zhang, Junjie Chen, Le Ou-Yang, Changsheng Chen, Ning Xie
2023	J	`jnl`	Self-representative kernel concept factorization. Knowl. Based Syst. Wenhui Wu, Yujie Chen, Ran Wang, Le Ou-Yang
2023	J	`jnl`	scMIC: A Deep Multi-Level Information Fusion Framework for Clustering Single-Cell Multi-Omics Data. IEEE J. Biomed. Health Informatics Youlin Zhan, Jiahan Liu, Le Ou-Yang
2023	J	`jnl`	scTSSR2: Imputing Dropout Events for Single-Cell RNA Sequencing Using Fast Two-Side Self-Representation. IEEE ACM Trans. Comput. Biol. Bioinform. Bo Li, Ke Jin, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2022	J	`jnl`	Anderson accelerating the preconditioned modulus approach for linear complementarity problems on second-order cones. Numer. Algorithms Zhizhi Li, Huai Zhang, Yimin Jin, Le Ou-Yang
2022	J	`jnl`	DEMOC: a deep embedded multi-omics learning approach for clustering single-cell CITE-seq data. Briefings Bioinform. Guanhua Zou, Yilong Lin, Tianyang Han, Le Ou-Yang
2022	J	`jnl`	Identifying Gene Network Rewiring Based on Partial Correlation. IEEE ACM Trans. Comput. Biol. Bioinform. Yuting Tan, Le Ou-Yang, Xingpeng Jiang, Hong Yan, Xiao-Fei Zhang
2022	J	`jnl`	Inferring Gene Co-Expression Networks by Incorporating Prior Protein-Protein Interaction Networks. IEEE ACM Trans. Comput. Biol. Bioinform. Meng-Guo Wang, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2022	J	`jnl`	MARS: A Motif-based Autoregressive Model for Retrosynthesis Prediction. CoRR Jiahan Liu, Chaochao Yan, Yang Yu, Chan Lu, Junzhou Huang, Le Ou-Yang, Peilin Zhao
2022	J	`jnl`	Matrix factorization for biomedical link prediction and scRNA-seq data imputation: an empirical survey. Briefings Bioinform. Le Ou-Yang, Fan Lu, Zi-Chao Zhang, Min Wu
2022	J	`jnl`	Predicting Protein-Ligand Binding Affinity with Equivariant Line Graph Network. CoRR Yiqiang Yi, Xu Wan, Kangfei Zhao, Le Ou-Yang, Peilin Zhao
2022	J	`jnl`	scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning. Briefings Bioinform. Hui-Sheng Li, Le Ou-Yang, Yuan Zhu, Hong Yan, Xiao-Fei Zhang
2021	J	`jnl`	A Joint Graphical Model for Inferring Gene Networks Across Multiple Subpopulations and Data Types. IEEE Trans. Cybern. Xiao-Fei Zhang, Le Ou-Yang, Ting Yan, Xiaohua Tony Hu, Hong Yan
2021	J	`jnl`	Differential network analysis by simultaneously considering changes in gene interactions and gene expression. Bioinform. Jia-Juan Tu, Le Ou-Yang, Yuan Zhu, Hong Yan, Hong Qin, Xiao-Fei Zhang
2021	J	`jnl`	EnTSSR: A Weighted Ensemble Learning Method to Impute Single-Cell RNA Sequencing Data. IEEE ACM Trans. Comput. Biol. Bioinform. Fan Lu, Yilong Lin, Chongbin Yuan, Xiao-Fei Zhang, Le Ou-Yang
2021	J	`jnl`	Recent advances in network-based methods for disease gene prediction. Briefings Bioinform. Sezin Kircali Ata, Min Wu, Yuan Fang, Le Ou-Yang, Chee Keong Kwoh, Xiaoli Li
2021	Misc	`conf`	Semantic Hierarchy Preserving Deep Hashing for Large-Scale Image Retrieval. MVA Ming Zhang, Xuefei Zhe, Le Ou-Yang, Shifeng Chen, Hong Yan
2021	J	`jnl`	The selection of the optimal parameter in the modulus-based matrix splitting algorithm for linear complementarity problems. Comput. Optim. Appl. Zhizhi Li, Huai Zhang, Le Ou-Yang
2021	J	`jnl`	Time-Varying Differential Network Analysis for Revealing Network Rewiring over Cancer Progression. IEEE ACM Trans. Comput. Biol. Bioinform. Ting Xu, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2021	J	`jnl`	WDNE: an integrative graphical model for inferring differential networks from multi-platform gene expression data with missing values. Briefings Bioinform. Le Ou-Yang, Dehan Cai, Xiao-Fei Zhang, Hong Yan
2021	J	`jnl`	WMLRR: A Weighted Multi-View Low Rank Representation to Identify Cancer Subtypes From Multiple Types of Omics Data. IEEE ACM Trans. Comput. Biol. Bioinform. Yesen Sun, Le Ou-Yang, Dao-Qing Dai
2020	J	`jnl`	A Machine Learning Approach to Blind Multi-Path Classification for Massive MIMO Systems. IEEE/ACM Trans. Netw. Ning Xie, Le Ou-Yang, Alex X. Liu
2020	J	`jnl`	A Machine Learning Approach to Phase Reference Estimation With Noise. IEEE Trans. Commun. Ning Xie, Le Ou-Yang, Alex X. Liu
2020	J	`jnl`	A graph regularized generalized matrix factorization model for predicting links in biomedical bipartite networks. Bioinform. Zi-Chao Zhang, Xiao-Fei Zhang, Min Wu, Le Ou-Yang, Xing-Ming Zhao, Xiaoli Li
2020	J	`jnl`	Differential Network Analysis via Weighted Fused Conditional Gaussian Graphical Model. IEEE ACM Trans. Comput. Biol. Bioinform. Le Ou-Yang, Xiao-Fei Zhang, Xiaohua Hu, Hong Yan
2020	J	`jnl`	Identifying Gene Network Rewiring Using Robust Differential Graphical Model with Multivariate $t$t-Distribution. IEEE ACM Trans. Comput. Biol. Bioinform. Rui Yuan, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2020	J	`jnl`	Joint reconstruction of multiple gene networks by simultaneously capturing inter-tumor and intra-tumor heterogeneity. Bioinform. Jia-Juan Tu, Le Ou-Yang, Hong Yan, Xiao-Fei Zhang, Hong Qin
2020	J	`jnl`	Recent Advances in Network-based Methods for Disease Gene Prediction. CoRR Sezin Kircali Ata, Min Wu, Yuan Fang, Le Ou-Yang, Chee Keong Kwoh, Xiaoli Li
2020	J	`jnl`	Self-weighted adaptive structure learning for ASD diagnosis via multi-template multi-center representation. Medical Image Anal. Fanglin Huang, Ee-Leng Tan, Peng Yang, Shan Huang, Le Ou-Yang, Jiuwen Cao, Tianfu Wang, Baiying Lei
2020	J	`jnl`	Sparse regularized low-rank tensor regression with applications in genomic data analysis. Pattern Recognit. Le Ou-Yang, Xiao-Fei Zhang, Hong Yan
2020	J	`jnl`	Spectrum Sharing in mmWave Cellular Networks Using Clustering Algorithms. IEEE/ACM Trans. Netw. Ning Xie, Le Ou-Yang, Alex X. Liu
2020	J	`jnl`	scTSSR: gene expression recovery for single-cell RNA sequencing using two-side sparse self-representation. Bioinform. Ke Jin, Le Ou-Yang, Xing-Ming Zhao, Hong Yan, Xiao-Fei Zhang
2019	J	`jnl`	DiffNetFDR: differential network analysis with false discovery rate control. Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xiaohua Hu, Hong Yan
2019	J	`jnl`	EnImpute: imputing dropout events in single-cell RNA-sequencing data via ensemble learning. Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xing-Ming Zhao, Xiaohua Hu, Hong Yan
2019	—	`conf`	Graph Convolutional Network Analysis for Mild Cognitive Impairment Prediction. ISBI Xin Zhao, Feng Zhou, Le Ou-Yang, Tianfu Wang, Baiying Lei
2019	B	`conf`	Improve L2-normalized Softmax with Exponential Moving Average. IJCNN Xuefei Zhe, Le Ou-Yang, Hong Yan
2019	J	`jnl`	Inferring Gene Network Rewiring by Combining Gene Expression and Gene Mutation Data. IEEE ACM Trans. Comput. Biol. Bioinform. Jia-Juan Tu, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2019	J	`jnl`	Joint Learning of Multiple Differential Networks With Latent Variables. IEEE Trans. Cybern. Le Ou-Yang, Xiao-Fei Zhang, Xing-Ming Zhao, Debby Dan Wang, Fu Lee Wang, Baiying Lei, Hong Yan
2019	—	`conf`	Multi-template Based Auto-Weighted Adaptive Structural Learning for ASD Diagnosis. MLMI@MICCAI Fanglin Huang, Peng Yang, Shan Huang, Le Ou-Yang, Tianfu Wang, Baiying Lei
2019	J	`jnl`	Predicting synthetic lethal interactions in human cancers using graph regularized self-representative matrix factorization. BMC Bioinform. Jiang Huang, Min Wu, Fan Lu, Le Ou-Yang, Zexuan Zhu
2019	J	`jnl`	Semantic Hierarchy Preserving Deep Hashing for Large-scale Image Retrieval. CoRR Xuefei Zhe, Le Ou-Yang, Shifeng Chen, Hong Yan
2019	—	`conf`	Sparse Low-rank Constrained Adaptive Structure Learning using Multi-template for Autism Spectrum Disorder Diagnosis. ISBI Fanglin Huang, Ahmed El-Azab, Le Ou-Yang, Joseph Tan, Tianfu Wang, Baiying Lei
2018	J	`jnl`	DiffGraph: an R package for identifying gene network rewiring using differential graphical models. Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Shuo Yang, Xiaohua Hu, Hong Yan
2018	J	`jnl`	Identifying Gene Network Rewiring by Integrating Gene Expression and Gene Network Data. IEEE ACM Trans. Comput. Biol. Bioinform. Ting Xu, Le Ou-Yang, Xiaohua Hu, Xiao-Fei Zhang
2018	J	`jnl`	RepLong: de novo repeat identification using long read sequencing data. Bioinform. Rui Guo, Yan-Ran Li, Shan He, Le Ou-Yang, Yiwen Sun, Zexuan Zhu
2017	J	`jnl`	A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks. BMC Bioinform. Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2017	J	`jnl`	Incorporating prior information into differential network analysis using non-paranormal graphical models. Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Hong Yan
2017	J	`jnl`	Node-based differential network analysis in genomics. Comput. Biol. Chem. Xiao-Fei Zhang, Le Ou-Yang, Hong Yan
2017	J	`jnl`	Protein Complex Detection via Effective Integration of Base Clustering Solutions and Co-Complex Affinity Scores. IEEE ACM Trans. Comput. Biol. Bioinform. Min Wu, Le Ou-Yang, Xiaoli Li
2016	J	`jnl`	A two-layer integration framework for protein complex detection. BMC Bioinform. Le Ou-Yang, Min Wu, Xiao-Fei Zhang, Dao-Qing Dai, Xiaoli Li, Hong Yan
2016	J	`jnl`	Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks. BMC Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Hong Yan
2016	—	`conf`	Identifying protein complexes via multi-network clustering. BIBM Le Ou-Yang, Hong Yan, Xiao-Fei Zhang
2016	J	`jnl`	Protein complex detection based on partially shared multi-view clustering. BMC Bioinform. Le Ou-Yang, Xiao-Fei Zhang, Dao-Qing Dai, Meng-Yun Wu, Yuan Zhu, Zhiyong Liu, Hong Yan
2016	J	`jnl`	Regularized logistic regression with network-based pairwise interaction for biomarker identification in breast cancer. BMC Bioinform. Meng-Yun Wu, Xiao-Fei Zhang, Dao-Qing Dai, Le Ou-Yang, Yuan Zhu, Hong Yan
2015	J	`jnl`	Detecting Protein Complexes from Signed Protein-Protein Interaction Networks. IEEE ACM Trans. Comput. Biol. Bioinform. Le Ou-Yang, Dao-Qing Dai, Xiao-Fei Zhang
2015	J	`jnl`	Determining minimum set of driver nodes in protein-protein interaction networks. BMC Bioinform. Xiao-Fei Zhang, Le Ou-Yang, Yuan Zhu, Meng-Yun Wu, Dao-Qing Dai
2014	J	`jnl`	Detecting overlapping protein complexes based on a generative model with functional and topological properties. BMC Bioinform. Xiao-Fei Zhang, Dao-Qing Dai, Le Ou-Yang, Hong Yan
2014	J	`jnl`	Detecting temporal protein complexes from dynamic protein-protein interaction networks. BMC Bioinform. Le Ou-Yang, Dao-Qing Dai, Xiaoli Li, Min Wu, Xiao-Fei Zhang, Peng Yang
2014	J	`jnl`	Microbial community pattern detection in human body habitats via ensemble clustering framework. BMC Syst. Biol. Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning
2014	J	`jnl`	Microbial community pattern detection in human body habitats via ensemble clustering framework. CoRR Peng Yang, Xiaoquan Su, Le Ou-Yang, Hon Nian Chua, Xiaoli Li, Kang Ning