Laxmi Parida - RankMe

141 papers A* 4A 2B 16C 8Misc 9Journal 80Unranked 19

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	AutoXAI4Omics: an automated explainable AI tool for omics and tabular data. Briefings Bioinform. James Strudwick, Laura-Jayne Gardiner, Kate Denning-James, Niina Haiminen, Ashley Evans, Jennifer Kelly, Matthew Madgwick, Filippo Utro, Ed Seabolt, Christopher Gibson, Bharat Bedi, Daniel Clayton, Ciaron Howell, Laxmi Parida, Anna Paola Carrieri
2025	J	`jnl`	Enhanced Prediction of CAR T-Cell Cytotoxicity with Quantum-Kernel Methods. CoRR Filippo Utro, Meltem Tolunay, Kahn Rhrissorrakrai, Tanvi P. Gujarati, Jie Shi, Sara Capponi, Mirko Amico, Nathan Earnest-Noble, Laxmi Parida
2025	J	`jnl`	How quantum computing can enhance biomarker discovery. Patterns Frederik F. Flöther, Daniel Blankenberg, Maria Demidik, Karl Jansen, Raga Krishnakumar, Rajiv Krishnakumar, Nouamane Laanait, Laxmi Parida, Carl Y. Saab, Filippo Utro
2025	J	`jnl`	Quantum Ensembling Methods for Healthcare and Life Science. CoRR Kahn Rhrissorrakrai, Kathleen E. Hamilton, Prerana Bangalore Parthsarathy, Aldo Guzmán-Sáenz, Tyler Alban, Filippo Utro, Laxmi Parida
2025	J	`jnl`	Towards Quantum Tensor Decomposition in Biomedical Applications. CoRR Myson C. Burch, Jiasen Zhang, Gideon Idumah, Hakan Doga, Richard Lartey, Lamis Yehia, Mingrui Yang, Murat Yildirim, Mihriban Karaayvaz, Omar Shehab, Weihong Guo, Ying Ni, Laxmi Parida, Xiaojuan Li, Aritra Bose
2024	J	`jnl`	Epidemiological topology data analysis links severe COVID-19 to RAAS and hyperlipidemia associated metabolic syndrome conditions. Bioinform. Daniel E. Platt, Aritra Bose, Kahn Rhrissorrakrai, Chaya Levovitz, Laxmi Parida
2024	Misc	`conf`	Hybrid Quantum-Classical Graph Neural Networks for Tumor Classification in Digital Pathology. QCE Anupama Ray, Dhiraj Madan, Srushti Patil, Pushpak Pati, Maria Anna Rapsomaniki, Aviwe Kohlakala, Thembelihle Rose Dlamini, Stephanie Julia Muller, Kahn Rhrissorrakrai, Filippo Utro, Laxmi Parida
2024	B	`conf`	MaSk-LMM: A Matrix Sketching Framework for Linear Mixed Models in Association Studies. RECOMB Myson C. Burch, Aritra Bose, Gregory Dexter, Laxmi Parida, Petros Drineas
2024	J	`jnl`	Towards quantum computing for clinical trial design and optimization: A perspective on new opportunities and challenges. CoRR Hakan Doga, Mustafa Emre Sahin, Joao H. Bettencourt-Silva, Anh Pham, Eunyoung Kim, Alan Andress, Sudhir Saxena, Aritra Bose, Laxmi Parida, Jan Lukas Robertus, Hideaki Kawaguchi, Radwa Soliman, Daniel Blankenberg
2023	J	`jnl`	Lesion Shedding Model: unraveling site-specific contributions to ctDNA. Briefings Bioinform. Kahn Rhrissorrakrai, Filippo Utro, Chaya Levovitz, Laxmi Parida
2023	J	`jnl`	Quantum Analog of Shannon's Lower Bound Theorem. CoRR Saugata Basu, Laxmi Parida
2022	Misc	`conf`	Epidemiological topology data analysis links severe COVID-19 to RAAS and hyperlipidemia associated metabolic syndrome conditions. AMIA Daniel E. Platt, Aritra Bose, Chaya Levovitz, Kahn Rhrissorrakrai, Laxmi Parida
2022	J	`jnl`	Sequents, barcodes, and homology. CoRR Saugata Basu, Negin Karisani, Laxmi Parida
2021	Misc	`conf`	Impact of Clinical and Genomic Factors on COVID-19 Disease Severity. AMIA Sanjoy Dey, Aritra Bose, Subrata Saha, Prithwish Chakraborty, Mohamed F. Ghalwash, Filippo Utro, Aldo Guzmán-Sáenz, Kenney Ng, Jianying Hu, Laxmi Parida, Daby Sow
2021	J	`jnl`	Inferring COVID-19 Biological Pathways from Clinical Phenotypes via Topological Analysis. CoRR Negin Karisani, Daniel E. Platt, Saugata Basu, Laxmi Parida
2021	J	`jnl`	Multiple Loci Selection with Multi-Way Epistasis in Coalescence with Recombination. Algorithms Aritra Bose, Filippo Utro, Daniel E. Platt, Laxmi Parida
2020	—	`conf`	A Topological Data Analysis Approach on Predicting Phenotypes from Gene Expression Data. AlCoB Sayan Mandal, Aldo Guzmán-Sáenz, Niina Haiminen, Saugata Basu, Laxmi Parida
2020	J	`jnl`	Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data. CoRR Lingjing Jiang, Niina Haiminen, Anna Paola Carrieri, Shi Huang, Yoshiki Vazquez-Baeza, Laxmi Parida, Ho-Cheol Kim, Austin D. Swafford, Rob Knight, Loki Natarajan
2019	J	`jnl`	Dark-matter matters: Discriminating subtle blood cancers using the darkest DNA. PLoS Comput. Biol. Laxmi Parida, Claudia Haferlach, Kahn Rhrissorrakrai, Filippo Utro, Chaya Levovitz, Wolfgang Kern, Niroshan Nadarajah, Sven Twardziok, Stephan Hutter, Manja Meggendorfer, Wencke Walter, Constance Baer, Torsten Haferlach
2019	Misc	`ed.`	Distributed Computing and Internet Technology - 15th International Conference, ICDCIT 2019, Bhubaneswar, India, January 10-13, 2019, Proceedings ICDCIT Günter Fahrnberger, Sapna Gopinathan, Laxmi Parida
2019	J	`jnl`	Haplotype assembly of autotetraploid potato using integer linear programing. Bioinform. Enrico Siragusa, Niina Haiminen, Richard Finkers, Richard G. F. Visser, Laxmi Parida
2019	J	`jnl`	Haplotype assembly of autotetraploid potato using integer linear programing. Bioinform. Enrico Siragusa, Niina Haiminen, Richard Finkers, Richard G. F. Visser, Laxmi Parida
2019	J	`jnl`	Linear Time Algorithms to Construct Populations Fitting Multiple Constraint Distributions at Genomic Scales. IEEE ACM Trans. Comput. Biol. Bioinform. Enrico Siragusa, Niina Haiminen, Filippo Utro, Laxmi Parida
2019	J	`jnl`	Signal enrichment with strain-level resolution in metagenomes using topological data analysis. BMC Genom. Aldo Guzmán-Sáenz, Niina Haiminen, Saugata Basu, Laxmi Parida
2018	C	`ed.`	18th International Workshop on Algorithms in Bioinformatics, WABI 2018, Helsinki, Finland, August 20-22, 2018 WABI Laxmi Parida, Esko Ukkonen
2018	Misc	`ed.`	Distributed Computing and Internet Technology - 14th International Conference, ICDCIT 2018, Bhubaneswar, India, January 11-13, 2018, Proceedings ICDCIT Atul Negi, Raj Bhatnagar, Laxmi Parida
2018	J	`jnl`	Efficient Algorithms for Sequence Analysis with Entropic Profiles. IEEE ACM Trans. Comput. Biol. Bioinform. Cinzia Pizzi, Mattia Ornamenti, Simone Spangaro, Simona E. Rombo, Laxmi Parida
2018	J	`jnl`	Efficient algorithms for polyploid haplotype phasing. BMC Genom. Dan He, Subrata Saha, Richard Finkers, Laxmi Parida
2018	C	`conf`	Essential Simplices in Persistent Homology and Subtle Admixture Detection. WABI Saugata Basu, Filippo Utro, Laxmi Parida
2018	—	`conf`	Simultaneous Phasing of Multiple Polyploids. CIBB Laxmi Parida, Filippo Utro
2017	—	`conf`	A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction. CIBB Filippo Utro, Daniel E. Platt, Laxmi Parida
2017	Misc	`ed.`	Distributed Computing and Internet Technology - 13th International Conference, ICDCIT 2017, Bhubaneswar, India, January 13-16, 2017, Proceedings ICDCIT Padmanabhan Krishnan, P. Radha Krishna, Laxmi Parida
2017	J	`jnl`	IPED2: Inheritance Path Based Pedigree Reconstruction Algorithm for Complicated Pedigrees. IEEE ACM Trans. Comput. Biol. Bioinform. Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2017	Misc	`conf`	MUSE: A Multi-locus Sampling-based Epistasis Algorithm for Quantitative Genetic Trait Prediction. PSB Dan He, Laxmi Parida
2016	J	`jnl`	Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis. BMC Syst. Biol. Daniel E. Platt, Saugata Basu, Pierre A. Zalloua, Laxmi Parida
2016	J	`jnl`	Design of the MCAW compute service for food safety bioinformatics. IBM J. Res. Dev. Stefan Edlund, Kristen L. Beck, Niina Haiminen, Laxmi Parida, Brian D. Storey, Bart C. Weimer, James H. Kaufman, David D. Chambliss
2016	Misc	`ed.`	Distributed Computing and Internet Technology - 12th International Conference, ICDCIT 2016, Bhubaneswar, India, January 15-18, 2016, Proceedings ICDCIT Nikolaj S. Bjørner, Sanjiva Prasad, Laxmi Parida
2016	J	`jnl`	Does encoding matter? A novel view on the quantitative genetic trait prediction problem. BMC Bioinform. Dan He, Laxmi Parida
2016	—	`conf`	Host Phenotype Prediction from Differentially Abundant Microbes Using RoDEO. CIBB Anna Paola Carrieri, Niina Haiminen, Laxmi Parida
2016	J	`jnl`	MINT: Mutual Information Based Transductive Feature Selection for Genetic Trait Prediction. IEEE ACM Trans. Comput. Biol. Bioinform. Dan He, Irina Rish, David Haws, Laxmi Parida
2016	J	`jnl`	Novel applications of multitask learning and multiple output regression to multiple genetic trait prediction. Bioinform. Dan He, David Kuhn, Laxmi Parida
2016	J	`jnl`	Sampling ARG of multiple populations under complex configurations of subdivision and admixture. Bioinform. Anna Paola Carrieri, Filippo Utro, Laxmi Parida
2016	—	`conf`	Scalable Algorithms at Genomic Resolution to fit LD Distributions. BCB Laxmi Parida, Niina Haiminen
2015	J	`jnl`	Data-driven encoding for quantitative genetic trait prediction. BMC Bioinform. Dan He, Zhanyong Wang, Laxmi Parida
2015	—	`conf`	Does encoding matter? A novel view on the quantitative genetic trait prediction problem. BIBM Dan He, Laxmi Parida
2015	Misc	`conf`	Host Trait Prediction of Metagenomic Data for Topology-Based Visualization. ICDCIT Laxmi Parida, Niina Haiminen, David Haws, Jan Suchodolski
2015	—	`conf`	MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction. ISBRA Dan He, Zhanyong Wang, Laxmi Parida
2015	—	`conf`	Performance evaluation of different encoding strategies for quantitative genetic trait prediction. ICCABS Oyetunji E. Ogundijo, Dan He, Laxmi Parida
2015	—	`conf`	SAME: a sampling-based multi-locus epistasis algorithm for quantitative genetic trait prediction. BCB Dan He, Laxmi Parida
2015	J	`jnl`	SimBA: simulation algorithm to fit extant-population distributions. BMC Bioinform. Laxmi Parida, Niina Haiminen
2015	B	`conf`	Topological Signatures for Population Admixture. RECOMB Laxmi Parida, Filippo Utro, Deniz Yörükoglu, Anna Paola Carrieri, David Kuhn, Saugata Basu
2014	C	`conf`	Best-Fit in Linear Time for Non-generative Population Simulation - (Extended Abstract). WABI Niina Haiminen, Claude Lebreton, Laxmi Parida
2014	J	`jnl`	Effect of sampling on the extent and accuracy of the inferred genetic history of recombining genome. Comput. Biol. Chem. Daniel E. Platt, Filippo Utro, Laxmi Parida
2014	C	`conf`	Entropic Profiles, Maximal Motifs and the Discovery of Significant Repetitions in Genomic Sequences. WABI Laxmi Parida, Cinzia Pizzi, Simona E. Rombo
2014	J	`jnl`	IPED2: Inheritance Path based Pedigree Reconstruction Algorithm for Complicated Pedigrees. CoRR Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2014	—	`conf`	IPED2: inheritance path based pedigree reconstruction algorithm for complicated pedigrees. BCB Dan He, Zhanyong Wang, Laxmi Parida, Eleazar Eskin
2014	J	`jnl`	Irredundant tandem motifs. Theor. Comput. Sci. Laxmi Parida, Cinzia Pizzi, Simona E. Rombo
2014	A	`conf`	Transductive HSIC Lasso. SDM Dan He, Irina Rish, Laxmi Parida
2013	J	`jnl`	Efficient Algorithms Niina Haiminen, Filippo Utro, Claude Lebreton, Pascal Flament, Zivan Karaman, Laxmi Parida
2013	—	`ch.`	Genetic History of Populations: Limits to Inference. Models and Algorithms for Genome Evolution Daniel E. Platt, Filippo Utro, Marc Pybus, Laxmi Parida
2013	J	`jnl`	ICT Strategies for Bridging Biology and Precision Medicine (Dagstuhl Perspectives Workshop 13342). Dagstuhl Reports Jonas S. Almeida, Andreas W. M. Dress, Titus Kühne, Laxmi Parida
2013	J	`jnl`	ICT for Bridging Biology and Medicine (Dagstuhl Perspectives Workshop 13342). Dagstuhl Manifestos Jonas S. Almeida, Andreas W. M. Dress, Titus Kühne, Laxmi Parida
2013	B	`conf`	IPED: Inheritance Path Based Pedigree Reconstruction Algorithm Using Genotype Data. RECOMB Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin
2013	J	`jnl`	IPED: Inheritance Path-based Pedigree Reconstruction Algorithm Using Genotype Data. J. Comput. Biol. Dan He, Zhanyong Wang, Buhm Han, Laxmi Parida, Eleazar Eskin
2013	J	`jnl`	MINT: Mutual Information based Transductive Feature Selection for Genetic Trait Prediction. CoRR Dan He, Irina Rish, David Haws, Simon Teyssedre, Zivan Karaman, Laxmi Parida
2013	J	`jnl`	Spectral Sequences, Exact Couples and Persistent Homology of filtrations. CoRR Saugata Basu, Laxmi Parida
2013	J	`jnl`	Sum of parts is greater than the whole: inference of common genetic history of populations. BMC Genom. Filippo Utro, Marc Pybus, Laxmi Parida
2013	J	`jnl`	Ultrametric networks: a new tool for phylogenetic analysis. Algorithms Mol. Biol. Alberto Apostolico, Matteo Comin, Andreas W. M. Dress, Laxmi Parida
2013	C	`conf`	Using Random Graphs in Population Genomics. CiE Laxmi Parida
2012	J	`jnl`	ARG-based genome-wide analysis of cacao cultivars. BMC Bioinform. Filippo Utro, Omar Cornejo, Donald Livingstone, Juan Motamayor, Laxmi Parida
2012	C	`conf`	Characterization and Extraction of Irredundant Tandem Motifs. SPIRE Laxmi Parida, Cinzia Pizzi, Simona E. Rombo
2012	J	`jnl`	Combinatorial Pattern Matching (CPM 2010). Inf. Comput. Amihood Amir, Laxmi Parida
2012	J	`jnl`	Structure Discovery in Biology: Motifs, Networks & Phylogenies (Dagstuhl Seminar 12291). Dagstuhl Reports Alberto Apostolico, Andreas W. M. Dress, Laxmi Parida
2011	J	`jnl`	A minimal descriptor of an ancestral recombinations graph. BMC Bioinform. Laxmi Parida, Pier Francesco Palamara, Asif Javed
2011	A*	`conf`	Experiences with mining temporal event sequences from electronic medical records: initial successes and some challenges. KDD Debprakash Patnaik, Patrick Butler, Naren Ramakrishnan, Laxmi Parida, Benjamin J. Keller, David A. Hanauer
2011	J	`jnl`	IRiS: Construction of ARG networks at genomic scales. Bioinform. Asif Javed, Marc Pybus, Marta Melé, Filippo Utro, Jaume Bertranpetit, Francesc Calafell, Laxmi Parida
2010	—	`conf`	10231 Abstracts Collection - Structure Discovery in Biology: Motifs, Networks & Phylogenies. Structure Discovery in Biology: Motifs, Networks & Phylogenies Alberto Apostolico, Andreas W. M. Dress, Laxmi Parida
2010	J	`jnl`	A New Method to Reconstruct Recombination Events at a Genomic Scale. PLoS Comput. Biol. Marta Melé, Asif Javed, Marc Pybus, Francesc Calafell, Laxmi Parida, Jaume Bertranpetit
2010	J	`jnl`	APBC 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010. BMC Bioinform. Laxmi Parida, Gene Myers
2010	J	`jnl`	Ancestral Recombinations Graph: A Reconstructability Perspective Using Random-Graphs Framework. J. Comput. Biol. Laxmi Parida
2010	B	`ed.`	Combinatorial Pattern Matching, 21st Annual Symposium, CPM 2010, New York, NY, USA, June 21-23, 2010. Proceedings CPM Amihood Amir, Laxmi Parida
2010	—	`conf`	Combinatorics in Recombinational Population Genomics. ISBRA Laxmi Parida
2010	—	`ed.`	Structure Discovery in Biology: Motifs, Networks & Phylogenies, 06.06. - 11.06.2010 Structure Discovery in Biology: Motifs, Networks & Phylogenies Alberto Apostolico, Andreas W. M. Dress, Laxmi Parida
2010	J	`jnl`	VARUN: Discovering Extensible Motifs under Saturation Constraints. IEEE ACM Trans. Comput. Biol. Bioinform. Alberto Apostolico, Matteo Comin, Laxmi Parida
2009	J	`jnl`	Minimizing recombinations in consensus networks for phylogeographic studies. BMC Bioinform. Laxmi Parida, Asif Javed, Marta Melé, Francesc Calafell, Jaume Bertranpetit
2008	J	`jnl`	Detection of subtle variations as consensus motifs. Theor. Comput. Sci. Matteo Comin, Laxmi Parida
2008	J	`jnl`	Estimating the Ancestral Recombinations Graph (ARG) as Compatible Networks of SNP Patterns. J. Comput. Biol. Laxmi Parida, Marta Melé, Francesc Calafell, Jaume Bertranpetit
2008	J	`jnl`	Motif patterns in 2D. Theor. Comput. Sci. Alberto Apostolico, Laxmi Parida, Simona E. Rombo
2007	J	`jnl`	Discovering Topological Motifs Using a Compact Notation. J. Comput. Biol. Laxmi Parida
2007	J	`jnl`	Gapped Permutation Pattern Discovery for Gene Order Comparisons. J. Comput. Biol. Laxmi Parida
2007	J	`jnl`	PROTERAN: animated terrain evolution for visual analysis of patterns in protein folding trajectory. Bioinform. Ruhong Zhou, Laxmi Parida, Kush Kapila, Sudhir P. Mudur
2007	J	`jnl`	Statistical Significance of Large Gene Clusters. J. Comput. Biol. Laxmi Parida
2007	B	`conf`	Subtle Motif Discovery for Detection of DNA Regulatory Sites. APBC Matteo Comin, Laxmi Parida
2006	—	`conf`	A PQ Framework for Reconstructions of Common Ancestors and Phylogeny. Comparative Genomics Laxmi Parida
2006	—	`conf`	Bridging Lossy and Lossless Compression by Motif Pattern Discovery. GTIT-C Alberto Apostolico, Matteo Comin, Laxmi Parida
2006	—	`conf`	Constructing Near-Perfect Phylogenies with multiple homoplasy events. ISMB (Supplement of Bioinformatics) Ravi Vijaya Satya, Amar Mukherjee, Gabriela Alexe, Laxmi Parida, Gyan Bhanot
2006	C	`conf`	Gapped Permutation Patterns for Comparative Genomics. WABI Laxmi Parida
2006	B	`conf`	Inferring Common Origins from mtDNA. RECOMB Ajay K. Royyuru, Gabriela Alexe, Daniel E. Platt, Ravi Vijaya Satya, Laxmi Parida, Saharon Rosset, Gyan Bhanot
2006	J	`jnl`	Mining, compressing and classifying with extensible motifs. Algorithms Mol. Biol. Alberto Apostolico, Matteo Comin, Laxmi Parida
2006	J	`jnl`	Using PQ Structures for Genomic Rearrangement Phylogeny. J. Comput. Biol. Laxmi Parida
2006	—	`conf`	Using Permutation Patterns for Content-Based Phylogeny. PRIB Md. Enamul Karim, Laxmi Parida, Arun Lakhotia
2005	J	`jnl`	An inexact-suffix-tree-based algorithm for detecting extensible patterns. Theor. Comput. Sci. Abhijit Chattaraj, Laxmi Parida
2005	J	`jnl`	Bridging Lossy and Lossless Compression by Motif Pattern Discovery. Electron. Notes Discret. Math. Alberto Apostolico, Matteo Comin, Laxmi Parida
2005	J	`jnl`	Combinatorial Pattern Discovery Approach for the Folding Trajectory Analysis of a PLoS Comput. Biol. Laxmi Parida, Ruhong Zhou
2005	—	`conf`	Conservative extraction of over-represented extensible motifs. ISMB (Supplement of Bioinformatics) Alberto Apostolico, Matteo Comin, Laxmi Parida
2005	J	`jnl`	Gene Proximity Analysis across Whole Genomes via PQ Trees J. Comput. Biol. Gad M. Landau, Laxmi Parida, Oren Weimann
2005	J	`jnl`	Malware phylogeny generation using permutations of code. J. Comput. Virol. Md. Enamul Karim, Andrew Walenstein, Arun Lakhotia, Laxmi Parida
2005	B	`conf`	Off-Line Compression by Extensible Motifs. DCC Alberto Apostolico, Matteo Comin, Laxmi Parida
2005	B	`conf`	Protein folding trajectory analysis using patterned clusters. APBC J. Feng, Laxmi Parida, Ruhong Zhou
2005	A*	`conf`	Redescription Mining: Structure Theory and Algorithms. AAAI Laxmi Parida, Naren Ramakrishnan
2005	B	`conf`	Using PQ Trees for Comparative Genomics. CPM Gad M. Landau, Laxmi Parida, Oren Weimann
2004	J	`jnl`	Incremental Paradigms of Motif Discovery. J. Comput. Biol. Alberto Apostolico, Laxmi Parida
2004	B	`conf`	Motifs in Ziv-Lempel-Welch Clef. Data Compression Conference Alberto Apostolico, Matteo Comin, Laxmi Parida
2004	J	`jnl`	Permutation Pattern Discovery in Biosequences. J. Comput. Biol. Revital Eres, Gad M. Landau, Laxmi Parida
2003	C	`conf`	A Combinatorial Approach to Automatic Discovery of Cluster-Patterns. WABI Revital Eres, Gad M. Landau, Laxmi Parida
2003	B	`conf`	Compression and the Wheel of Fortune. DCC Alberto Apostolico, Laxmi Parida
2003	J	`jnl`	The web server of IBM's Bioinformatics and Pattern Discovery group. Nucleic Acids Res. Tien Huynh, Isidore Rigoutsos, Laxmi Parida, Daniel E. Platt, Tetsuo Shibuya
2001	B	`conf`	An Output-Sensitive Flexible Pattern Discovery Algorithm. CPM Laxmi Parida, Isidore Rigoutsos, Daniel E. Platt
2001	J	`jnl`	DELPHI: A pattern-based method for detecting sequence similarity. IBM J. Res. Dev. Aris Floratos, Isidore Rigoutsos, Laxmi Parida, Yuan Gao
2001	J	`jnl`	QSAR in grossly underdetermined systems: Opportunities and issues. IBM J. Res. Dev. Daniel E. Platt, Laxmi Parida, Yuan Gao, Aris Floratos, Isidore Rigoutsos
2001	J	`jnl`	Sock Sorting: An Example of a Vague Algorithm. Log. J. IGPL Rohit Parikh, Laxmi Parida, Vaughan R. Pratt
2000	J	`jnl`	Partitioning single-molecule maps into multiple populations: algorithms and probabilistic analysis. Discret. Appl. Math. Laxmi Parida, Bud Mishra
2000	A*	`conf`	Pattern discovery on character sets and real-valued data: linear bound on irredundant motifs and an efficient polynomial time algorithm. SODA Laxmi Parida, Isidore Rigoutsos, Aris Floratos, Daniel E. Platt, Yuan Gao
2000	B	`conf`	Some Results on Flexible-Pattern Discovery. CPM Laxmi Parida
1999	J	`jnl`	An Approximation Algorithm for Alignment of Multiple Sequences using Motif Discovery. J. Comb. Optim. Laxmi Parida, Aris Floratos, Isidore Rigoutsos
1999	A	`conf`	Building Dictionaries of 1D and 3D Motifs by Mining the Unaligned 1D Sequences of 17 Archaeal and Bacterial Genomes. ISMB Isidore Rigoutsos, Yuan Gao, Aris Floratos, Laxmi Parida
1999	J	`jnl`	Mass Estimation of DNA Molecules and Extraction of Ordered Restriction Maps in Optical Mapping Imagery. Algorithmica Laxmi Parida, Dan Geiger
1999	B	`conf`	Sequence homology detection through large scale pattern discovery. RECOMB Aris Floratos, Isidore Rigoutsos, Laxmi Parida, Gustavo Stolovitzky, Yuan Gao
1998	J	`jnl`	A Uniform Framework for Ordered Restriction Map Problems. J. Comput. Biol. Laxmi Parida
1998	—	`—`	Algorithmic Techniques in Computational Genomics. Laxmi Parida
1998	J	`jnl`	Junctions: Detection, Classification, and Reconstruction. IEEE Trans. Pattern Anal. Mach. Intell. Laxmi Parida, Davi Geiger, Robert A. Hummel
1998	B	`conf`	Partitioning RECOMB Laxmi Parida, Bud Mishra
1997	—	`conf`	Kona: A Multi-junction Detector Using Minimum Description Length Principle. EMMCVPR Laxmi Parida, Davi Geiger, Robert A. Hummel
1997	B	`conf`	Towards constructing physical maps by optical mapping (extended abstract): an effective, simple, combinatorial approach. RECOMB S. Muthukrishnan, Laxmi Parida
1996	A*	`conf`	Visual Organization for Figure/Ground Separation. CVPR Davi Geiger, Krishnan Kumaran, Laxmi Parida
1995	J	`jnl`	Common tangents to planar parametric curves: a geometric solution. Comput. Aided Des. Laxmi Parida, Sudhir P. Mudur
1994	J	`jnl`	Computational methods for evaluating swept object boundaries. Vis. Comput. Laxmi Parida, Sudhir P. Mudur
1993	J	`jnl`	A computational technique for general shape deformations for use in font design. Comput. Graph. Laxmi Parida
1993	J	`jnl`	Constraint-satisfying planar development of complex surfaces. Comput. Aided Des. Laxmi Parida, Sudhir P. Mudur
1993	—	`conf`	Vinyas: An Interactive Calligraphic Type Design System. ICCG Laxmi Parida
1991	J	`jnl`	A closed form solution to the problem of tangential circles, lines, points with extension to 3D. Comput. Graph. Laxmi Parida, Pramod Koparkar