Laurent Mouchard

57 papers B 4C 3Misc 6Journal 34Unranked 10
YearRankTypeTitle / Venue / Authors
2020 J jnl
Absent words in a sliding window with applications.
Inf. Comput.
Maxime Crochemore, Alice Héliou, Gregory Kucherov, Laurent Mouchard, Solon P. Pissis, Yann Ramusat
2019 J jnl
Efficient pattern matching in degenerate strings with the Burrows-Wheeler transform.
Inf. Process. Lett.
Jacqueline W. Daykin, Richard Groult, Yannick Guesnet, Thierry Lecroq, Arnaud Lefebvre, Martine Léonard, Laurent Mouchard, Élise Prieur, Bruce W. Watson
2018 J jnl
A data-supported history of bioinformatics tools.
CoRR
Clément Levin, Emeric Dynomant, Bruno J. Gonzalez, Laurent Mouchard, David Landsman, Eivind Hovig, Kristian Vlahovicek
2018 J jnl
FM-index of alignment with gaps.
Theor. Comput. Sci.
Joong Chae Na, Hyunjoon Kim, Seunghwan Min, Heejin Park, Thierry Lecroq, Martine Léonard, Laurent Mouchard, Kunsoo Park
2018 Misc conf
Three Strategies for the Dead-Zone String Matching Algorithm.
PSC
Jacqueline W. Daykin, Richard Groult, Yannick Guesnet, Thierry Lecroq, Arnaud Lefebvre, Martine Léonard, Laurent Mouchard, Élise Prieur-Gaston, Bruce W. Watson
2017 J jnl
Efficient pattern matching in degenerate strings with the Burrows-Wheeler transform.
CoRR
Jacqueline W. Daykin, Richard Groult, Yannick Guesnet, Thierry Lecroq, Arnaud Lefebvre, Martine Léonard, Laurent Mouchard, Élise Prieur-Gaston, Bruce W. Watson
2017 B conf
Minimal Absent Words in a Sliding Window and Applications to On-Line Pattern Matching.
FCT
Maxime Crochemore, Alice Héliou, Gregory Kucherov, Laurent Mouchard, Solon P. Pissis, Yann Ramusat
2016 J jnl
Efficient dynamic range minimum query.
Theor. Comput. Sci.
Alice Héliou, Martine Léonard, Laurent Mouchard, Mikaël Salson
2016 J jnl
FM-index of Alignment with Gaps.
CoRR
Joong Chae Na, Hyunjoon Kim, Seunghwan Min, Heejin Park, Thierry Lecroq, Martine Léonard, Laurent Mouchard, Kunsoo Park
2016 J jnl
FM-index of alignment: A compressed index for similar strings.
Theor. Comput. Sci.
Joong Chae Na, Hyunjoon Kim, Heejin Park, Thierry Lecroq, Martine Léonard, Laurent Mouchard, Kunsoo Park
2015 J jnl
Editorial.
J. Discrete Algorithms
Thierry Lecroq, Laurent Mouchard
2015 — conf
Parallelising the Computation of Minimal Absent Words.
PPAM (2)
Carl Barton, Alice Héliou, Laurent Mouchard, Solon P. Pissis
2014 J jnl
Dealing with uncertainty and imprecision in image segmentation using belief function theory.
Int. J. Approx. Reason.
Benoît Lelandais, Isabelle Gardin, Laurent Mouchard, Pierre Vera, Su Ruan
2014 J jnl
Extending alignments with k-mismatches and ℓ-gaps.
Theor. Comput. Sci.
Carl Barton, Costas S. Iliopoulos, Inbok Lee, Laurent Mouchard, Kunsoo Park, Solon P. Pissis
2014 J jnl
Linear-time Computation of Minimal Absent Words Using Suffix Array.
CoRR
Carl Barton, Alice Héliou, Laurent Mouchard, Solon P. Pissis
2014 J jnl
Linear-time computation of minimal absent words using suffix array.
BMC Bioinform.
Carl Barton, Alice Héliou, Laurent Mouchard, Solon P. Pissis
2013 C ed.
Combinatorial Algorithms - 24th International Workshop, IWOCA 2013, Rouen, France, July 10-12, 2013, Revised Selected Papers
IWOCA
Thierry Lecroq, Laurent Mouchard
2013 J jnl
Querying highly similar sequences.
Int. J. Comput. Biol. Drug Des.
Carl Barton, Mathieu Giraud, Costas S. Iliopoulos, Thierry Lecroq, Laurent Mouchard, Solon P. Pissis
2013 C conf
Suffix Array of Alignment: A Practical Index for Similar Data.
SPIRE
Joong Chae Na, Heejin Park, Sunho Lee, Minsung Hong, Thierry Lecroq, Laurent Mouchard, Kunsoo Park
2013 J jnl
Suffix Tree of Alignment: An Efficient Index for Similar Data
CoRR
Joong Chae Na, Heejin Park, Maxime Crochemore, Jan Holub, Costas S. Iliopoulos, Laurent Mouchard, Kunsoo Park
2013 C conf
Suffix Tree of Alignment: An Efficient Index for Similar Data.
IWOCA
Joong Chae Na, Heejin Park, Maxime Crochemore, Jan Holub, Costas S. Iliopoulos, Laurent Mouchard, Kunsoo Park
2012 J jnl
An algorithm for mapping short reads to a dynamically changing genomic sequence.
J. Discrete Algorithms
Costas S. Iliopoulos, Derrick G. Kourie, Laurent Mouchard, Themba K. Musombuka, Solon P. Pissis, Corné de Ridder
2012 J jnl
Editorial.
J. Discrete Algorithms
Laurent Mouchard, Simon J. Puglisi
2012 — conf
Lyndon fountains and the Burrows-Wheeler transform.
CUBE
Ali Alatabbi, Maxime Crochemore, Jacqueline W. Daykin, Laurent Mouchard
2012 J jnl
On the number of elements to reorder when updating a suffix array.
J. Discrete Algorithms
Martine Léonard, Laurent Mouchard, Mikaël Salson
2012 — conf
Querying Highly Similar Structured Sequences via Binary Encoding and Word Level Operations.
AIAI (2)
Ali Alatabbi, Carl Barton, Costas S. Iliopoulos, Laurent Mouchard
2012 — conf
Segmentation of Biological Target Volumes on Multi-tracer PET Images Based on Information Fusion for Achieving Dose Painting in Radiotherapy.
MICCAI (1)
Benoît Lelandais, Isabelle Gardin, Laurent Mouchard, Pierre Vera, Su Ruan
2012 — conf
Using Belief Function Theory to Deal with Uncertainties and Imprecisions in Image Processing.
Belief Functions
Benoît Lelandais, Isabelle Gardin, Laurent Mouchard, Pierre Vera, Su Ruan
2010 J jnl
Dynamic extended suffix arrays.
J. Discrete Algorithms
Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard
2010 — conf
REAL: an efficient REad ALigner for next generation sequencing reads.
BCB
Kimon Frousios, Costas S. Iliopoulos, Laurent Mouchard, Solon P. Pissis, German Tischler
2009 — conf
A Parallel Algorithm for the Fixed-length Approximate String Matching Problem for High Throughput Sequencing Technologies.
PARCO
Costas S. Iliopoulos, Laurent Mouchard, Solon P. Pissis
2009 J jnl
A four-stage algorithm for updating a Burrows-Wheeler transform.
Theor. Comput. Sci.
Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard
2009 J jnl
Algorithms for mapping short degenerate and weighted sequences to a reference genome.
Int. J. Comput. Biol. Drug Des.
Pavlos Antoniou, Costas S. Iliopoulos, Laurent Mouchard, Solon P. Pissis
2009 — conf
Practical and Efficient Algorithms for Degenerate and Weighted Sequences Derived from High Throughput Sequencing Technologies.
IJCBS
Pavlos Antoniou, Costas S. Iliopoulos, Laurent Mouchard, Solon P. Pissis
2008 J jnl
A New Approach to Pattern Matching in Degenerate DNA/RNA Sequences and Distributed Pattern Matching.
Math. Comput. Sci.
Costas S. Iliopoulos, Laurent Mouchard, Mohammad Sohel Rahman
2008 Misc conf
Dynamic Burrows-Wheeler Transform.
PSC
Mikaël Salson, Thierry Lecroq, Martine Léonard, Laurent Mouchard
2007 J jnl
Combinatorial Pattern Matching.
J. Discrete Algorithms
Kunsoo Park, Laurent Mouchard
2007 B conf
Pattern Matching in Degenerate DNA/RNA Sequences.
WALCOM
M. Sohel Rahman, Costas S. Iliopoulos, Laurent Mouchard
2006 J jnl
Computation of Repetitions and Regularities of Biologically Weighted Sequences.
J. Comput. Biol.
Manolis Christodoulakis, Costas S. Iliopoulos, Laurent Mouchard, Katerina Perdikuri, Athanasios K. Tsakalidis, Kostas Tsichlas
2005 J jnl
A Linear Algorithm for the Detection of Evolutive Tandem Repeats.
J. Autom. Lang. Comb.
Richard Groult, Martine Léonard, Laurent Mouchard
2005 J jnl
Computing the Repetitions in a Biological Weighted Sequence.
J. Autom. Lang. Comb.
Costas S. Iliopoulos, Laurent Mouchard, Katerina Perdikuri, Athanasios K. Tsakalidis
2004 J jnl
Speeding up the detection of evolutive tandem repeats.
Theor. Comput. Sci.
Richard Groult, Martine Léonard, Laurent Mouchard
2003 Misc conf
A Linear Algorithm for the Detection of Evolutive Tandem Repeats.
PSC
Richard Groult, Martine Léonard, Laurent Mouchard
2003 Misc conf
Computing the Repetitions in a Weighted Sequence.
PSC
Costas S. Iliopoulos, Laurent Mouchard, Katerina Perdikuri, Athanasios K. Tsakalidis
2003 J jnl
String Regularities with Don't Cares.
Nord. J. Comput.
Costas S. Iliopoulos, Manal Mohamed, Laurent Mouchard, Katerina Perdikuri, William F. Smyth, Athanasios K. Tsakalidis
2002 J jnl
Algorithms for Computing Approximate Repetitions in Musical Sequences.
Int. J. Comput. Math.
Emilios Cambouropoulos, Maxime Crochemore, Costas S. Iliopoulos, Laurent Mouchard, Yoan J. Pinzón
2002 B conf
Evolutive Tandem Repeats Using Hamming Distance.
MFCS
Richard Groult, Martine Léonard, Laurent Mouchard
2002 Misc conf
String Regularities with Don't Cares.
PSC
Costas S. Iliopoulos, Manal Mohamed, Laurent Mouchard, Katerina Perdikuri, William F. Smyth, Athanasios K. Tsakalidis
2001 J jnl
Distributed Pattern Matching Using Finite Automata.
J. Autom. Lang. Comb.
Jan Holub, Costas S. Iliopoulos, Borivoj Melichar, Laurent Mouchard
2001 Misc conf
Genome and Stringology.
PSC
Laurent Mouchard
2001 — conf
The Max-Shift Algorithm for Approximate String Matching.
WAE
Costas S. Iliopoulos, Laurent Mouchard, Yoan J. Pinzón
2000 — conf
Computing Approximate Repetitions in Musical Sequences.
PSCW
Costas S. Iliopoulos, Thierry Lecroq, Laurent Mouchard, Yoan J. Pinzón
2000 J jnl
Normal forms of quasiperiodic strings.
Theor. Comput. Sci.
Laurent Mouchard
2000 B conf
Periods and Quasiperiods Characterization.
CPM
Mireille Régnier, Laurent Mouchard
1999 J jnl
Quasiperiodicity and String Covering.
Theor. Comput. Sci.
Costas S. Iliopoulos, Laurent Mouchard
1999 J jnl
Quasiperiodicity: From Detection to Normal Forms.
J. Autom. Lang. Comb.
Costas S. Iliopoulos, Laurent Mouchard
1999 J jnl
Sequences Obtained from a Series of Permutations of Borders and Ultimately Periodic Words.
J. Autom. Lang. Comb.
Jean-Pierre Duval, Laurent Mouchard