Lars Wienbrandt

25 papers B 2C 2Misc 6Journal 5Unranked 9
YearRankTypeTitle / Venue / Authors
2025 — conf
Logistic Regression with Covariate Clustering in Genome-Wide Association Interaction Studies.
ICCS (Workshops 1)
Volker Neff, Lars Wienbrandt, David Ellinghaus
2020 — conf
Network Aggregation to Enhance Results Derived from Multiple Analytics.
AIAI (1)
Diane Duroux, Héctor Climente-González, Lars Wienbrandt, Kristel Van Steen
2020 — conf
Reference-Based Haplotype Phasing with FPGAs.
ICCS (3)
Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus
2019 J jnl
1000× faster than PLINK: Combined FPGA and GPU accelerators for logistic regression-based detection of epistasis.
J. Comput. Sci.
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2018 — conf
1, 000x Faster Than PLINK: Genome-Wide Epistasis Detection with Logistic Regression Using Combined FPGA and GPU Accelerators.
ICCS (2)
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2017 Misc conf
Fast Genome-Wide Third-order SNP Interaction Tests with Information Gain on a Low-cost Heterogeneous Parallel FPGA-GPU Computing Architecture.
ICCS
Lars Wienbrandt, Jan Christian Kässens, Matthias Hübenthal, David Ellinghaus
2016 — conf
Combining GPU and FPGA technology for efficient exhaustive interaction analysis in GWAS.
ASAP
Jan Christian Kässens, Lars Wienbrandt, Manfred Schimmler, Jorge González-Domínguez, Bertil Schmidt
2016 — —
FPGAs in Bioinformatics - Implementation and Evaluation of Common Bioinformatics Algorithms in Reconfigurable Logic.
Lars Wienbrandt
2016 Misc conf
Genome-Wide Association Interaction Studies with MB-MDR and maxT multiple testing correction on FPGAs.
ICCS
Sven Gundlach, Jan Christian Kässens, Lars Wienbrandt
2015 J jnl
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs.
J. Comput. Sci.
Jan Christian Kässens, Lars Wienbrandt, Jorge González-Domínguez, Bertil Schmidt, Manfred Schimmler
2015 J jnl
Large-scale genome-wide association studies on a GPU cluster using a CUDA-accelerated PGAS programming model.
Int. J. High Perform. Comput. Appl.
Jorge González-Domínguez, Jan Christian Kässens, Lars Wienbrandt, Bertil Schmidt
2015 J jnl
Parallelizing Epistasis Detection in GWAS on FPGA and GPU-Accelerated Computing Systems.
IEEE ACM Trans. Comput. Biol. Bioinform.
Jorge González-Domínguez, Lars Wienbrandt, Jan Christian Kässens, David Ellinghaus, Manfred Schimmler, Bertil Schmidt
2014 B conf
An efficient implementation of PBKDF2 with RIPEMD-160 on multiple FPGAs.
ICPADS
Ayman Abbas, Rian Voss, Lars Wienbrandt, Manfred Schimmler
2014 Misc conf
FPGA-based Acceleration of Detecting Statistical Epistasis in GWAS.
ICCS
Lars Wienbrandt, Jan Christian Kässens, Jorge González-Domínguez, Bertil Schmidt, David Ellinghaus, Manfred Schimmler
2014 — conf
Hybrid CPU/GPU Acceleration of Detection of 2-SNP Epistatic Interactions in GWAS.
Euro-Par
Jorge González-Domínguez, Bertil Schmidt, Jan Christian Kässens, Lars Wienbrandt
2014 C conf
The FPGA-Based High-Performance Computer RIVYERA for Applications in Bioinformatics.
CiE
Lars Wienbrandt
2014 C conf
UPC++ for bioinformatics: A case study using genome-wide association studies.
CLUSTER
Jan Christian Kässens, Jorge González-Domínguez, Lars Wienbrandt, Bertil Schmidt
2012 Misc conf
An FPGA Implementation of an Investment Strategy Processor.
ICCS
Christoph Starke, Vasco Grossmann, Lars Wienbrandt, Manfred Schimmler
2012 B conf
Dictionary Attack on TrueCrypt with RIVYERA S3-5000.
ICPADS
Ayman Abbas, Claas Anders Rathje, Lars Wienbrandt, Manfred Schimmler
2012 — conf
Improvement of BLASTp on the FPGA-Based High-Performance Computer RIVYERA.
ISBRA
Lars Wienbrandt, Daniel Siebert, Manfred Schimmler
2012 J jnl
Optimizing Investment Strategies with the Reconfigurable Hardware Platform RIVYERA.
Int. J. Reconfigurable Comput.
Christoph Starke, Vasco Grossmann, Lars Wienbrandt, Sven Koschnicke, John Carstens, Manfred Schimmler
2011 Misc conf
Massively parallel FPGA-based implementation of BLASTp with the two-hit method.
ICCS
Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Florian Schatz, Manfred Schimmler
2010 — conf
Collecting Statistical Information in DNA Sequences for the Detection of Special Motifs.
BIOCOMP
Lars Wienbrandt, Manfred Schimmler
2010 Misc conf
Using the reconfigurable massively parallel architecture COPACOBANA 5000 for applications in bioinformatics.
ICCS
Lars Wienbrandt, Stefan Baumgart, Jost Bissel, Carol May Yen Yeo, Manfred Schimmler
2008 — conf
Massively Parallelized DNA Motif Search on the Reconfigurable Hardware Platform COPACOBANA.
PRIB
Jan Schröder, Lars Wienbrandt, Gerd Pfeiffer, Manfred Schimmler