Krzysztof Kotowski

27 papers Journal 17Unranked 10

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Trojan horse hunt in deep forecasting models: Insights from the European Space Agency competition. CoRR Krzysztof Kotowski, Ramez Shendy, Jakub Nalepa, Agata Kaczmarek, Dawid Pludowski, Piotr Wilczynski, Artur Janicki, Przemyslaw Biecek, Ambros Marzetta, Atul Pande, Lalit Chandra Routhu, Swapnil Srivastava, Evridiki Vasileia Ntagiou
2025	J	`jnl`	DisorderUnetLM: Validating ProteinUnet for efficient protein intrinsic disorder prediction. Comput. Biol. Medicine Krzysztof Kotowski, Irena Roterman, Katarzyna Stapor
2025	J	`jnl`	Fake or Real: The Impostor Hunt in Texts for Space Operations. CoRR Agata Kaczmarek, Dawid Pludowski, Piotr Wilczynski, Krzysztof Kotowski, Ramez Shendy, Evridiki Vasileia Ntagiou, Jakub Nalepa, Artur Janicki, Przemyslaw Biecek
2025	—	`conf`	MASCOTS: Model-Agnostic Symbolic COunterfactual Explanations for Time Series. ECML/PKDD (4) Dawid Pludowski, Francesco Spinnato, Piotr Wilczynski, Krzysztof Kotowski, Evridiki Vasileia Ntagiou, Riccardo Guidotti, Przemyslaw Biecek
2025	J	`jnl`	MASCOTS: Model-Agnostic Symbolic COunterfactual explanations for Time Series. CoRR Dawid Pludowski, Francesco Spinnato, Piotr Wilczynski, Krzysztof Kotowski, Evridiki Vasileia Ntagiou, Riccardo Guidotti, Przemyslaw Biecek
2025	J	`jnl`	Trojan Horse Hunt in Time Series Forecasting for Space Operations. CoRR Krzysztof Kotowski, Ramez Shendy, Jakub Nalepa, Przemyslaw Biecek, Piotr Wilczynski, Agata Kaczmarek, Dawid Pludowski, Artur Janicki, Evridiki Vasileia Ntagiou
2024	—	`conf`	Automated Hepatocellular Carcinoma Analysis in Multi-phase CT with Deep Learning. CaPTion@MICCAI Krzysztof Kotowski, Bartosz Machura, Damian Kucharski, Benjamín Gutiérrez-Becker, Agata Krason, Jean Tessier, Jakub Nalepa
2024	J	`jnl`	European Space Agency Benchmark for Anomaly Detection in Satellite Telemetry. CoRR Krzysztof Kotowski, Christoph Haskamp, Jacek Andrzejewski, Bogdan Ruszczak, Jakub Nalepa, Daniel Lakey, Peter Collins, Aybike Kolmas, Mauro Bartesaghi, Jose Martinez-Heras, Gabriele De Canio
2024	J	`jnl`	Protein intrinsic disorder prediction using Attention U-Net and ProtTrans protein language model. CoRR Krzysztof Kotowski, Irena Roterman, Katarzyna Stapor
2024	J	`jnl`	The OPS-SAT benchmark for detecting anomalies in satellite telemetry. CoRR Bogdan Ruszczak, Krzysztof Kotowski, David Evans, Jakub Nalepa
2023	J	`jnl`	Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients. Comput. Biol. Medicine Jakub Nalepa, Krzysztof Kotowski, Bartosz Machura, Szymon Adamski, Oskar Bozek, Bartosz Eksner, Bartosz Kokoszka, Tomasz Pekala, Mateusz Radom, Marek Strzelczak, Lukasz Zarudzki, Agata Krason, Filippo Arcadu, Jean Tessier
2023	J	`jnl`	Detecting liver cirrhosis in computed tomography scans using clinically-inspired and radiomic features. Comput. Biol. Medicine Krzysztof Kotowski, Damian Kucharski, Bartosz Machura, Szymon Adamski, Benjamín Gutiérrez-Becker, Agata Krason, Lukasz Zarudzki, Jean Tessier, Jakub Nalepa
2023	—	`conf`	Machine Learning Detects Anomalies in OPS-SAT Telemetry. ICCS (1) Bogdan Ruszczak, Krzysztof Kotowski, Jacek Andrzejewski, Alicja Musial, David Evans, Vladimir Zelenevskiy, Sam Bammens, Rodrigo Laurinovics, Jakub Nalepa
2023	J	`jnl`	OXI: An online tool for visualization and annotation of satellite time series data. SoftwareX Bogdan Ruszczak, Krzysztof Kotowski, Jacek Andrzejewski, Christoph Haskamp, Jakub Nalepa
2023	J	`jnl`	The importance of ocular artifact removal in single-trial ERP analysis: The case of the N250 in face learning. Biomed. Signal Process. Control. Krzysztof Kotowski, Jeremi K. Ochab, Katarzyna Stapor, Werner Sommer
2022	J	`jnl`	Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients. CoRR Jakub Nalepa, Krzysztof Kotowski, Bartosz Machura, Szymon Adamski, Oskar Bozek, Bartosz Eksner, Bartosz Kokoszka, Tomasz Pekala, Mateusz Radom, Marek Strzelczak, Lukasz Zarudzki, Agata Krason, Filippo Arcadu, Jean Tessier
2022	—	`conf`	Federated Evaluation of nnU-Nets Enhanced with Domain Knowledge for Brain Tumor Segmentation. BrainLes@MICCAI (2) Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Wojciech Malara, Lukasz Zarudzki, Jakub Nalepa
2022	—	`conf`	Infusing Domain Knowledge into nnU-Nets for Segmenting Brain Tumors in MRI. BrainLes@MICCAI Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
2022	J	`jnl`	Lightweight ProteinUnet2 network for protein secondary structure prediction: a step towards proper evaluation. BMC Bioinform. Katarzyna Stapor, Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman
2022	—	`conf`	Robustifying Automatic Assessment of Brain Tumor Progression from MRI. BrainLes@MICCAI Krzysztof Kotowski, Bartosz Machura, Jakub Nalepa
2022	J	`jnl`	Segmenting pediatric optic pathway gliomas from MRI using deep learning. Comput. Biol. Medicine Jakub Nalepa, Szymon Adamski, Krzysztof Kotowski, Sylwia Chelstowska, Magdalena Machnikowska-Sokolowska, Oskar Bozek, Agata Wisz, Elzbieta Jurkiewicz
2021	—	`conf`	Coupling nnU-Nets with Expert Knowledge for Accurate Brain Tumor Segmentation from MRI. BrainLes@MICCAI (2) Krzysztof Kotowski, Szymon Adamski, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
2021	J	`jnl`	ProteinUnet - An efficient alternative to SPIDER3-single for sequence-based prediction of protein secondary structures. J. Comput. Chem. Krzysztof Kotowski, Tomasz Smolarczyk, Irena Roterman-Konieczna, Katarzyna Stapor
2020	J	`jnl`	Fully-automated deep learning-powered system for DCE-MRI analysis of brain tumors. Artif. Intell. Medicine Jakub Nalepa, Pablo Ribalta Lorenzo, Michal Marcinkiewicz, Barbara Bobek-Billewicz, Pawel Wawrzyniak, Maksym Walczak, Michal Kawulok, Wojciech Dudzik, Krzysztof Kotowski, Izabela Burda, Bartosz Machura, Grzegorz Mrukwa, Pawel Ulrych, Michael P. Hayball
2020	—	`conf`	Segmenting Brain Tumors from MRI Using Cascaded 3D U-Nets. BrainLes@MICCAI (2) Krzysztof Kotowski, Szymon Adamski, Wojciech Malara, Bartosz Machura, Lukasz Zarudzki, Jakub Nalepa
2019	—	`conf`	Detection and Segmentation of Brain Tumors from MRI Using U-Nets. BrainLes@MICCAI (2) Krzysztof Kotowski, Jakub Nalepa, Wojciech Dudzik
2018	—	`conf`	Deep Learning Features for Face Age Estimation: Better Than Human? BDAS Krzysztof Kotowski, Katarzyna Stapor