Kristina Gruden

19 papers C 1Journal 12Unranked 3
YearRankTypeTitle / Venue / Authors
2023 J jnl
DDeMON: Ontology-based function prediction by Deep Learning from Dynamic Multiplex Networks.
CoRR
Jan Kralj, Blaz Skrlj, Ziva Ramsak, Nada Lavrac, Kristina Gruden
2022 J jnl
PaintOmics 4: new tools for the integrative analysis of multi-omics datasets supported by multiple pathway databases.
Nucleic Acids Res.
Tianyuan Liu, Pedro Salguero, Marko Petek, Carlos Martínez-Mira, Leandro Balzano-Nogueira, Ziva Ramsak, Lauren McIntyre, Kristina Gruden, Sonia Tarazona, Ana Conesa
2020 J jnl
The need for standardisation in life science research - an approach to excellence and trust.
F1000Research
Susanne Hollmann, Andreas Kremer, Spela Baebler, Christophe Trefois, Kristina Gruden, Witold R. Rudnicki, Weida Tong, Aleksandra Gruca, Erik Bongcam-Rudloff, Chris T. A. Evelo, Alina S. Nechyporenko, Marcus Frohme, David Safránek, Babette Regierer, Domenica D'Elia
2019 J jnl
Discovery of Relevant Response in Infected Potato Plants from Time Series of Gene Expression Data.
Mach. Learn. Knowl. Extr.
Dragan Gamberger, Tjasa Stare, Dragana Miljkovic, Kristina Gruden, Nada Lavrac
2019 J jnl
Interactive exploration of heterogeneous biological networks with Biomine Explorer.
Bioinform.
Vid Podpecan, Ziva Ramsak, Kristina Gruden, Hannu Toivonen, Nada Lavrac
2017 J jnl
quantGenius: implementation of a decision support system for qPCR-based gene quantification.
BMC Bioinform.
Spela Baebler, Miha Svalina, Marko Petek, Katja Stare, Ana Rotter, Marusa Pompe-Novak, Kristina Gruden
2014 J jnl
GMOseek: a user friendly tool for optimized GMO testing.
BMC Bioinform.
Dany Morisset, Petra Kralj Novak, Darko Zupanic, Kristina Gruden, Nada Lavrac, Jana Zel
2014 J jnl
GoMapMan: integration, consolidation and visualization of plant gene annotations within the MapMan ontology.
Nucleic Acids Res.
Ziva Ramsak, Spela Baebler, Ana Rotter, Matej Korbar, Igor Mozetic, Björn Usadel, Kristina Gruden
2014 J jnl
Plant defence model revisions through iterative minimisation of constraint violations.
Int. J. Comput. Biol. Drug Des.
Dragana Miljkovic, Matjaz Depolli, Tjasa Stare, Igor Mozetic, Marko Petek, Kristina Gruden, Nada Lavrac
2013 J jnl
Contrasting Subgroup Discovery.
Comput. J.
Laura Langohr, Vid Podpecan, Marko Petek, Igor Mozetic, Kristina Gruden, Nada Lavrac, Hannu Toivonen
2013 — conf
Incremental revision of biological networks from texts.
IWBBIO
Dragana Miljkovic, Vid Podpecan, Tjasa Stare, Igor Mozetic, Kristina Gruden, Nada Lavrac
2013 — conf
Integrating semantic transcriptomic data analysis and knowledge extraction from biological literature.
BIBM
Vid Podpecan, Dragana Miljkovic, Marko Petek, Tjasa Stare, Kristina Gruden, Igor Mozetic, Nada Lavrac
2013 J jnl
The GMOseek matrix: a decision support tool for optimizing the detection of genetically modified plants.
BMC Bioinform.
Annette Block, Frédéric Debode, Lutz Grohmann, Julie Hulin, Isabel Taverniers, Linda Kluga, Elodie Barbau-Piednoir, Sylvia Broeders, Ingrid Huber, Marc Van den Bulcke, Petra Heinze, Gilbert Berben, Ulrich Busch, Nancy Roosens, Eric Janssen, Jana Zel, Kristina Gruden, Dany Morisset
2012 — conf
Constraint-driven optimization of plant defense model parameters.
BIBM Workshops
Dragana Miljkovic, Matjaz Depolli, Igor Mozetic, Nada Lavrac, Tjasa Stare, Marko Petek, Kristina Gruden
2012 — ch.
Contrast Mining from Interesting Subgroups.
Bisociative Knowledge Discovery
Laura Langohr, Vid Podpecan, Marko Petek, Igor Mozetic, Kristina Gruden
2012 — ch.
Modelling a Biological System: Network Creation by Triplet Extraction from Biological Literature.
Bisociative Knowledge Discovery
Dragana Miljkovic, Vid Podpecan, Miha Grcar, Kristina Gruden, Tjasa Stare, Marko Petek, Igor Mozetic, Nada Lavrac
2012 — ch.
Semantic Subgroup Discovery and Cross-Context Linking for Microarray Data Analysis.
Bisociative Knowledge Discovery
Igor Mozetic, Nada Lavrac, Vid Podpecan, Petra Kralj Novak, Helena Motaln, Marko Petek, Kristina Gruden, Hannu Toivonen, Kimmo Kulovesi
2011 J jnl
SegMine workflows for semantic microarray data analysis in Orange4WS.
BMC Bioinform.
Vid Podpecan, Nada Lavrac, Igor Mozetic, Petra Kralj Novak, Igor Trajkovski, Laura Langohr, Kimmo Kulovesi, Hannu Toivonen, Marko Petek, Helena Motaln, Kristina Gruden
2010 C conf
Bisociative Knowledge Discovery for Microarray Data Analysis.
ICCC
Igor Mozetic, Nada Lavrac, Vid Podpecan, Petra Kralj Novak, Helena Motaln, Marko Petek, Kristina Gruden, Hannu Toivonen, Kimmo Kulovesi