Kim Rutherford

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2022 J jnl
PHI-base in 2022: a multi-species phenotype database for Pathogen-Host Interactions.
Nucleic Acids Res.
Martin Urban, Alayne Cuzick, James Seager, Valerie Wood, Kim Rutherford, Shilpa Yagwakote Venkatesh, Jashobanta Sahu, S. Vijaylakshmi Iyer, Lokanath Khamari, Nishadi De Silva, Manuel Carbajo Martinez, Helder Pedro, Andrew D. Yates, Kim E. Hammond-Kosack
2020 J jnl
Community curation in PomBase: enabling fission yeast experts to provide detailed, standardized, sharable annotation from research publications.
Database J. Biol. Databases Curation
Antonia Lock, Midori A. Harris, Kim Rutherford, Jacqueline Hayles, Valerie Wood
2020 J jnl
PHI-base: the pathogen?host interactions database.
Nucleic Acids Res.
Martin Urban, Alayne Cuzick, James Seager, Valerie Wood, Kim Rutherford, Shilpa Yagwakote Venkatesh, Nishadi De Silva, Manuel Carbajo Martinez, Helder Pedro, Andrew D. Yates, Keywan Hassani-Pak, Kim E. Hammond-Kosack
2019 J jnl
PomBase 2018: user-driven reimplementation of the fission yeast database provides rapid and intuitive access to diverse, interconnected information.
Nucleic Acids Res.
Antonia Lock, Kim Rutherford, Midori A. Harris, Jacqueline Hayles, Stephen G. Oliver, Jürg Bähler, Valerie Wood
2017 J jnl
PHI-base: a new interface and further additions for the multi-species pathogen-host interactions database.
Nucleic Acids Res.
Martin Urban, Alayne Cuzick, Kim Rutherford, Alistair G. Irvine, Helder Pedro, Rashmi Pant, Vidyendra Sadanadan, Lokanath Khamari, Santoshkumar Billal, Sagar Mohanty, Kim E. Hammond-Kosack
2015 J jnl
PomBase 2015: updates to the fission yeast database.
Nucleic Acids Res.
Mark D. McDowall, Midori A. Harris, Antonia Lock, Kim Rutherford, Daniel M. Staines, Jürg Bähler, Paul J. Kersey, Stephen G. Oliver, Valerie Wood
2012 J jnl
InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data.
Bioinform.
Richard N. Smith, Jelena Aleksic, Daniela Butano, Adrian Carr, Sergio Contrino, Fengyuan Hu, Mike Lyne, Rachel Lyne, Alex Kalderimis, Kim Rutherford, Radek Stepan, Julie M. Sullivan, Matthew Wakeling, Xavier Watkins, Gos Micklem
2012 J jnl
PomBase: a comprehensive online resource for fission yeast.
Nucleic Acids Res.
Valerie Wood, Midori A. Harris, Mark D. McDowall, Kim Rutherford, Brendan W. Vaughan, Daniel M. Staines, Martin Aslett, Antonia Lock, Jürg Bähler, Paul J. Kersey, Stephen G. Oliver
2012 J jnl
modMine: flexible access to modENCODE data.
Nucleic Acids Res.
Sergio Contrino, Richard N. Smith, Daniela Butano, Adrian Carr, Fengyuan Hu, Rachel Lyne, Kim Rutherford, Alex Kalderimis, Julie M. Sullivan, Seth Carbon, Ellen T. Kephart, Paul Lloyd, E. O. Stinson, Nicole L. Washington, Marc D. Perry, Peter Ruzanov, Zheng Zha, Suzanna E. Lewis, Lincoln D. Stein, Gos Micklem
2005 J jnl
ACT: the Artemis comparison tool.
Bioinform.
Tim J. Carver, Kim Rutherford, Matthew Berriman, Marie-Adèle Rajandream, Bart Barrell, Julian Parkhill
2005 J jnl
WebACT - an online companion for the Artemis Comparison Tool.
Bioinform.
J. C. Abbott, David M. Aanensen, Kim Rutherford, Sarah A. Butcher, Brian G. Spratt
2004 J jnl
GeneDB: a resource for prokaryotic and eukaryotic organisms.
Nucleic Acids Res.
Christiane Hertz-Fowler, Chris S. Peacock, Valerie Wood, Martin Aslett, Arnaud Kerhornou, Paul Mooney, Adrian Tivey, Matthew Berriman, Neil Hall, Kim Rutherford, Julian Parkhill, Alasdair C. Ivens, Marie-Adèle Rajandream, Bart Barrell
2003 J jnl
Viewing and Annotating Sequence Data with Artemis.
Briefings Bioinform.
Matthew Berriman, Kim Rutherford
2000 J jnl
Artemis: sequence visualization and annotation.
Bioinform.
Kim Rutherford, Julian Parkhill, James Crook, Terry Horsnell, Peter Rice, Marie-Adèle Rajandream, Bart Barrell