Kevin W. Eliceiri

35 papers A* 2A 1Journal 29Unranked 3
YearRankTypeTitle / Venue / Authors
2025 J jnl
SAMJ: Fast Image Annotation on ImageJ/Fiji via Segment Anything Model.
CoRR
Carlos Garcia-Lopez-de-Haro, Caterina Fuster-Barceló, Curtis T. Rueden, Jónathan Heras, Vladimír Ulman, Daniel Franco-Barranco, Adrián Inés, Kevin W. Eliceiri, Jean-Christophe Olivo-Marin, Jean-Yves Tinevez, Daniel Sage, Arrate Muñoz-Barrutia
2025 J jnl
The importance of democratized resources in early-career training for bioimage analysts and bioimaging scientists.
Frontiers Bioinform.
Genevieve Laprade, Quinn Lee, Kristin L. Gallik, Michael Nelson, Natalie Woo, Celina Terán Ramírez, Alexis Ricardo Becerril Cuevas, Kevin W. Eliceiri, Corinne Esquibel
2024 J jnl
SciJava Ops: An Improved Algorithms Framework for Fiji and Beyond.
CoRR
Gabriel J. Selzer, Curtis T. Rueden, Mark C. Hiner, Edward L. Evans, David Kolb, Marcel Wiedenmann, Christian Birkhold, Tim-Oliver Buchholz, Stefan Helfrich, Brian Northan, Alison E. Walter, Johannes E. Schindelin, Tobias Pietzsch, Stephan Saalfeld, Michael R. Berthold, Kevin W. Eliceiri
2024 J jnl
SciJava Ops: an improved algorithms framework for Fiji and beyond.
Frontiers Bioinform.
Gabriel J. Selzer, Curtis T. Rueden, Mark C. Hiner, Edward L. Evans, David Kolb, Marcel Wiedenmann, Christian Birkhold, Tim-Oliver Buchholz, Stefan Helfrich, Brian Northan, Alison E. Walter, Johannes E. Schindelin, Tobias Pietzsch, Stephan Saalfeld, Michael R. Berthold, Kevin W. Eliceiri
2023 J jnl
Collagen fiber centerline tracking in fibrotic tissue via deep neural networks with variational autoencoder-based synthetic training data generation.
Medical Image Anal.
Hyojoon Park, Bin Li, Yuming Liu, Michael S. Nelson, Helen M. Wilson, Eftychios Sifakis, Kevin W. Eliceiri
2023 J jnl
Moving beyond the desktop: prospects for practical bioimage analysis via the web.
Frontiers Bioinform.
Wei Ouyang, Kevin W. Eliceiri, Beth A. Cimini
2023 J jnl
Real-time open-source FLIM analysis.
Frontiers Bioinform.
Kevin K. D. Tan, Mark A. Tsuchida, Jenu Varghese Chacko, Niklas A. Gahm, Kevin W. Eliceiri
2022 J jnl
A deep learning framework for classifying microglia activation state using morphology and intrinsic fluorescence lifetime data.
Frontiers Neuroinformatics
Lopamudra Mukherjee, Abdul Kader Sagar, Jonathan N. Ouellette, Jyoti J. Watters, Kevin W. Eliceiri
2022 J jnl
Meeting in the Middle: Towards Successful Multidisciplinary Bioimage Analysis Collaboration.
Frontiers Bioinform.
Anjalie Schlaeppi, Wilson Adams, Robert Haase, Jan Huisken, Ryan B. Macdonald, Kevin W. Eliceiri, Elisabeth Kugler
2021 J jnl
Developing open-source software for bioimage analysis: opportunities and challenges.
F1000Research
Florian Levet, Anne E. Carpenter, Kevin W. Eliceiri, Anna Kreshuk, Peter Bankhead, Robert Haase
2021 A* conf
Dual-Stream Multiple Instance Learning Network for Whole Slide Image Classification With Self-Supervised Contrastive Learning.
CVPR
Bin Li, Yin Li, Kevin W. Eliceiri
2021 J jnl
Hyperdimensional Imaging Contrast Using an Optical Fiber.
Sensors
Jenu Varghese Chacko, Han Nim Lee, Wenxin Wu, Marisa S. Otegui, Kevin W. Eliceiri
2021 A* conf
MAT: Processing In-Memory Acceleration for Long-Sequence Attention.
DAC
Minxuan Zhou, Yunhui Guo, Weihong Xu, Bin Li, Kevin W. Eliceiri, Tajana Rosing
2021 J jnl
Single image super-resolution for whole slide image using convolutional neural networks and self-supervised color normalization.
Medical Image Anal.
Bin Li, Adib Keikhosravi, Agnes G. Loeffler, Kevin W. Eliceiri
2020 J jnl
Dual-stream Maximum Self-attention Multi-instance Learning.
CoRR
Bin Li, Kevin W. Eliceiri
2020 J jnl
Dual-stream Multiple Instance Learning Network for Whole Slide Image Classification with Self-supervised Contrastive Learning.
CoRR
Bin Li, Yin Li, Kevin W. Eliceiri
2020 J jnl
Integration of the ImageJ Ecosystem in KNIME Analytics Platform.
Frontiers Comput. Sci.
Christian Dietz, Curtis T. Rueden, Stefan Helfrich, Ellen T. A. Dobson, Martin Horn, Jan Eglinger, Edward L. Evans, Dalton T. McLean, Tatiana Novitskaya, William A. Ricke, Nathan M. Sherer, Andries Zijlstra, Michael R. Berthold, Kevin W. Eliceiri
2019 J jnl
Coding Scheme Optimization for Fast Fluorescence Lifetime Imaging.
ACM Trans. Graph.
Jongho Lee, Jenu Varghese Chacko, Bing Dai, Syed Azer Reza, Abdul Kader Sagar, Kevin W. Eliceiri, Andreas Velten, Mohit Gupta
2019 A conf
Shedding Light: Integrating Bioimaging Technologies into the Design of an Interactive Museum Exhibit.
Conference on Designing Interactive Systems
Joyce Ma, Eyal Shahar, Kevin W. Eliceiri, Guneet Mehta, Kristina Yu
2019 J jnl
Spatially Adaptive Colocalization Analysis in Dual-Color Fluorescence Microscopy.
IEEE Trans. Image Process.
Shulei Wang, Ellen T. Arena, Jordan T. Becker, William M. Bement, Nathan M. Sherer, Kevin W. Eliceiri, Ming Yuan
2018 J jnl
Automated and Robust Quantification of Colocalization in Dual-Color Fluorescence Microscopy: A Nonparametric Statistical Approach.
IEEE Trans. Image Process.
Shulei Wang, Ellen T. Arena, Kevin W. Eliceiri, Ming Yuan
2018 J jnl
FunImageJ: a Lisp framework for scientific image processing.
Bioinform.
Kyle I. S. Harrington, Curtis T. Rueden, Kevin W. Eliceiri
2018 — conf
Neighborhood regularized image superresolution for applications to microscopic imaging.
ISBI
Lopamudra Mukherjee, Adib Keikhosravi, Kevin W. Eliceiri
2017 J jnl
ImageJ-MATLAB: a bidirectional framework for scientific image analysis interoperability.
Bioinform.
Mark C. Hiner, Curtis T. Rueden, Kevin W. Eliceiri
2017 J jnl
ImageJ2: ImageJ for the next generation of scientific image data.
BMC Bioinform.
Curtis T. Rueden, Johannes E. Schindelin, Mark C. Hiner, Barry E. DeZonia, Alison E. Walter, Ellen T. Arena, Kevin W. Eliceiri
2017 J jnl
ImageJ2: ImageJ for the next generation of scientific image data.
CoRR
Curtis T. Rueden, Johannes E. Schindelin, Mark C. Hiner, Barry E. DeZonia, Alison E. Walter, Kevin W. Eliceiri
2017 J jnl
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification.
Bioinform.
Ignacio Arganda-Carreras, Verena Kaynig, Curtis Rueden, Kevin W. Eliceiri, Johannes E. Schindelin, Albert Cardona, H. Sebastian Seung
2016 J jnl
SCIFIO: an extensible framework to support scientific image formats.
BMC Bioinform.
Mark C. Hiner, Curtis Rueden, Kevin W. Eliceiri
2016 J jnl
Sonification of hyperspectral fluorescence microscopy datasets.
F1000Research
Aprameya Mysore, Andreas Velten, Kevin W. Eliceiri
2015 J jnl
Closed-Loop Optogenetic Brain Interface.
IEEE Trans. Biomed. Eng.
Ramin Pashaie, Ryan Baumgartner, Thomas J. Richner, Sarah K. Brodnick, Mehdi Azimipour, Kevin W. Eliceiri, Justin C. Williams
2014 — conf
A chronic window imaging device for the investigation of in vivo peripheral nerves.
EMBC
Sarah K. Brodnick, Mohammed R. Hayat, Sahil Kapur, Thomas J. Richner, Michael W. Nonte, Kevin W. Eliceiri, Lisa Krugner-Higby, Justin C. Williams, Samuel O. Poore
2011 J jnl
Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software.
Bioinform.
Lee Kamentsky, Thouis R. Jones, Adam Fraser, Mark-Anthony Bray, David J. Logan, Katherine L. Madden, Vebjorn Ljosa, Curtis Rueden, Kevin W. Eliceiri, Anne E. Carpenter
2009 — conf
Image Reconstruction of Multiphoton Microscopy Data.
ISBI
Jared Doot, Kevin W. Eliceiri, Robert D. Nowak, Rebecca Willett
2009 J jnl
Unifying Biological Image Formats with HDF5.
ACM Queue
Matthew T. Dougherty, Michael J. Folk, Erez Zadok, Herbert J. Bernstein, Frances C. Bernstein, Kevin W. Eliceiri, Werner Benger, Christoph Best
2009 J jnl
Unifying biological image formats with HDF5.
Commun. ACM
Matthew T. Dougherty, Michael J. Folk, Erez Zadok, Herbert J. Bernstein, Frances C. Bernstein, Kevin W. Eliceiri, Werner Benger, Christoph Best