Keehyoung Joo

16 papers A* 1Journal 14
YearRankTypeTitle / Venue / Authors
2026 A* conf
On the Information Processing of One-Dimensional Wasserstein Distances with Finite Samples.
AAAI
Cheongjae Jang, Jong-Hyun Won, Soyeon Jun, Chun Kee Chung, Keehyoung Joo, Yung-Kyun Noh
2025 J jnl
DeepFold-PLM: accelerating protein structure prediction via efficient homology search using protein language models.
Bioinform.
Minsoo Kim, Hanjin Bae, Gyeongpil Jo, Kunwoo Kim, Sung Jong Lee, Jejoong Yoo, Keehyoung Joo
2025 J jnl
On the Information Processing of One-Dimensional Wasserstein Distances with Finite Samples.
CoRR
Cheongjae Jang, Jong-Hyun Won, Soyeon Jun, Chun Kee Chung, Keehyoung Joo, Yung-Kyun Noh
2023 J jnl
Application of conformational space annealing to the protein structure modeling using cryo-EM maps.
J. Comput. Chem.
Jimin Park, InSuk Joung, Keehyoung Joo, Jooyoung Lee
2023 J jnl
DeepFold: enhancing protein structure prediction through optimized loss functions, improved template features, and re-optimized energy function.
Bioinform.
Jae-Won Lee, Jong-Hyun Won, Seonggwang Jeon, Yujin Choo, Yubin Yeon, Jin-Seon Oh, Minsoo Kim, Seonhwa Kim, InSuk Joung, Cheongjae Jang, Sung Jong Lee, Tae Hyun Kim, Kyong Hwan Jin, Giltae Song, Eun-Sol Kim, Jejoong Yoo, Eunok Paek, Yung-Kyun Noh, Keehyoung Joo
2020 J jnl
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13.
J. Chem. Inf. Model.
Agnieszka S. Karczynska, Karolina Zieba, Urszula Uciechowska, Magdalena A. Mozolewska, Pawel Krupa, Emilia A. Lubecka, Agnieszka G. Lipska, Celina Sikorska, Sergey A. Samsonov, Adam K. Sieradzan, Artur Gieldon, Adam Liwo, Rafal Slusarz, Magdalena Slusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski
2019 J jnl
ConDo: protein domain boundary prediction using coevolutionary information.
Bioinform.
Seung Hwan Hong, Keehyoung Joo, Jooyoung Lee
2018 J jnl
Conformational Space Annealing explained: A general optimization algorithm, with diverse applications.
Comput. Phys. Commun.
InSuk Joung, Jong Yun Kim, Steven P. Gross, Keehyoung Joo, Jooyoung Lee
2017 J jnl
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins.
J. Comput. Chem.
Agnieszka S. Karczynska, Cezary Czaplewski, Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Adam Liwo
2017 J jnl
Protein Loop Structure Prediction Using Conformational Space Annealing.
J. Chem. Inf. Model.
Seungryong Heo, Juyong Lee, Keehyoung Joo, Hang-Cheol Shin, Jooyoung Lee
2016 J jnl
Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field.
J. Chem. Inf. Model.
Magdalena A. Mozolewska, Pawel Krupa, Bartlomiej Zaborowski, Adam Liwo, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski
2015 J jnl
Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field.
J. Chem. Inf. Model.
Pawel Krupa, Magdalena A. Mozolewska, Keehyoung Joo, Jooyoung Lee, Cezary Czaplewski, Adam Liwo
2015 J jnl
Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest.
BMC Bioinform.
Juyong Lee, Kiho Lee, InSuk Joung, Keehyoung Joo, Bernard R. Brooks, Jooyoung Lee
2014 J jnl
Subgrouping Automata: Automatic sequence subgrouping using phylogenetic tree-based optimum subgrouping algorithm.
Comput. Biol. Chem.
Joo-Hyun Seo, Jihyang Park, Eun-Mi Kim, Juhan Kim, Keehyoung Joo, Jooyoung Lee, Byung-Gee Kim
2012 — ch.
A Visual Analytics Approach for Protein Disorder Prediction.
Expanding the Frontiers of Visual Analytics and Visualization
Jaegul Choo, Fuxin Li, Keehyoung Joo, Haesun Park
2008 J jnl
Re-examination of structure optimization of off-lattice protein AB models by conformational space annealing.
J. Comput. Chem.
Jinwoo Lee, Keehyoung Joo, Seung-Yeon Kim, Jooyoung Lee