Kavishwar B. Wagholikar

62 papers Misc 22Journal 28Unranked 12

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Principles and implementation strategies for equitable and representative academic partnerships in global health informatics research. J. Am. Medical Informatics Assoc. Elizabeth Campbell, Oliver J. Bear Don't Walk IV, Hamish S. F. Fraser, Judy Gichoya, Kavishwar B. Wagholikar, Andrew S. Kanter, Felix Holl, Sansanee Craig
2022	J	`jnl`	An objective framework for evaluating unrecognized bias in medical AI models predicting COVID-19 outcomes. J. Am. Medical Informatics Assoc. Hossein Estiri, Zachary H. Strasser, Sina Rashidian, Jeffrey G. Klann, Kavishwar B. Wagholikar, Thomas H. McCoy Jr., Shawn N. Murphy
2022	J	`jnl`	I2b2-etl: Python application for importing electronic health data into the informatics for integrating biology and the bedside platform. Bioinform. Kavishwar B. Wagholikar, Layne Ainsworth, David Zelle, Kira Chaney, Michael Mendis, Jeffrey G. Klann, Alexander J. Blood, Angela Miller, Rupendra Chulyadyo, Michael Oates, William J. Gordon, Samuel J. Aronson, Benjamin M. Scirica, Shawn N. Murphy
2022	J	`jnl`	International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality. npj Digit. Medicine Griffin M. Weber, Chuan Hong, Zongqi Xia, Nicolas Paris, Miguel Pedrera-Jiménez, Ashley C. Pfaff, Emily R. Pfaff, Danielle Pillion, Sara Pizzimenti, Hans-Ulrich Prokosch, Robson A. Prudente, Andrea Prunotto, Víctor Quirós-González, Maryna Raskin, Siegbert Rieg, Gustavo Roig-Domínguez, Pablo Rojo, Paula Rubio-Mayo, Paolo Sacchi, Carlos Sáez, Elisa Salamanca, Malarkodi Jebathilagam Samayamuthu, L. Nelson Sanchez-Pinto, Arnaud Sandrin, Nandhini Santhanam, Janaina C. C. Santos, Fernando J. Sanz Vidorreta, Maria Savino, Jürgen Schüttler, Luigia Scudeller, Neil J. Sebire, Pablo Serrano-Balazote, Patricia Serre, Arnaud Serret-Larmande, Mohsin Shah, Zahra Shakeri Hossein Abad, Domenick Silvio, Piotr Sliz, Jiyeon Son, Charles Sonday, Andrew M. South, Francesca Sperotto, Zachary H. Strasser, Bryce W. Q. Tan, Suzana E. Tanni, Deanne M. Taylor, Ana I. Terriza-Torres, Patric Tippmann, Emma M. S. Toh, Yi-Ju Tseng, Andrew K. Vallejos, Gaël Varoquaux, Margaret E. Vella, Guillaume Verdy, Jill-Jênn Vie, Michele Vitacca, Kavishwar B. Wagholikar, Lemuel R. Waitman, Demian Wassermann, Martin Wolkewitz, Scott Wong, Xin Xiong, Ye Ye, Nadir Yehya, William Yuan, Alberto Zambelli, Harrison G. Zhang, Daniela Zöller, Valentina Zuccaro, Chiara Zucco
2022	J	`jnl`	International electronic health record-derived post-acute sequelae profiles of COVID-19 patients. npj Digit. Medicine Harrison G. Zhang, Arianna Dagliati, Zahra Shakeri Hossein Abad, Xin Xiong, Clara-Lea Bonzel, Zongqi Xia, Bryce W. Q. Tan, Paul Avillach, Gabriel A. Brat, Chuan Hong, Michele Morris, Shyam Visweswaran, Lav P. Patel, Alba Gutiérrez-Sacristán, David A. Hanauer, John H. Holmes, Malarkodi Jebathilagam Samayamuthu, Florence T. Bourgeois, Sehi L'Yi, Sarah E. Maidlow, Bertrand Moal, Shawn N. Murphy, Zachary H. Strasser, Antoine Neuraz, Kee Yuan Ngiam, Ne-Hooi Will Loh, Gilbert S. Omenn, Andrea Prunotto, Lauren A. Dalvin, Jeffrey G. Klann, Petra Schubert, Fernando J. Sanz Vidorreta, Vincent Benoit, Guillaume Verdy, Ramakanth Kavuluru, Hossein Estiri, Yuan Luo, Alberto Malovini, Valentina Tibollo, Riccardo Bellazzi, Kelly Cho, Yuk-Lam Ho, Amelia L. M. Tan, Byorn W. L. Tan, Nils Gehlenborg, Sara Lozano-Zahonero, Vianney Jouhet, Luca Chiovato, Bruce J. Aronow, Emma M. S. Toh, Wei Gen Scott Wong, Sara Pizzimenti, Kavishwar B. Wagholikar, Mauro Bucalo, Tianxi Cai, Andrew M. South, Isaac S. Kohane, Griffin M. Weber
2021	J	`jnl`	Predicting COVID-19 mortality with electronic medical records. npj Digit. Medicine Hossein Estiri, Zachary H. Strasser, Jeffrey G. Klann, Pourandokht Naseri, Kavishwar B. Wagholikar, Shawn N. Murphy
2021	J	`jnl`	Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J. Am. Medical Informatics Assoc. Jeffrey G. Klann, Hossein Estiri, Griffin M. Weber, Bertrand Moal, Paul Avillach, Chuan Hong, Amelia L. M. Tan, Brett K. Beaulieu-Jones, Victor M. Castro, Thomas Maulhardt, Alon Geva, Alberto Malovini, Andrew M. South, Shyam Visweswaran, Michele Morris, Malarkodi J. Samayamuthu, Gilbert S. Omenn, Kee Yuan Ngiam, Kenneth D. Mandl, Martin Boeker, Karen L. Olson, Danielle L. Mowery, Robert W. Follett, David A. Hanauer, Riccardo Bellazzi, Jason H. Moore, Ne-Hooi Will Loh, Douglas S. Bell, Kavishwar B. Wagholikar, Luca Chiovato, Valentina Tibollo, Siegbert Rieg, Anthony L. L. J. Li, Vianney Jouhet, Emily Schriver, Zongqi Xia, Meghan Hutch, Yuan Luo, Isaac S. Kohane, Gabriel A. Brat, Shawn N. Murphy
2021	J	`jnl`	Workflow Automation for a Virtual Hypertension Management Program. Appl. Clin. Inform. Samuel J. Aronson, Benjamin M. Scirica, William J. Gordon, Alexander J. Blood, Kira Chaney, Eugene Clark, Corey Glynn, Remlee Green, John St. Laurent, Charlotte Mailly, Marian McPartlin, Shawn Murphy, Hunter Nichols, Michael Oates, Samantha Subramaniam, Matthew Varugheese, Kavishwar B. Wagholikar
2020	Misc	`conf`	High-throughput Phenotyping with EHR Sequences. AMIA Shawn N. Murphy, Hossein Estiri, Zachary H. Strasser, Kavishwar B. Wagholikar, Victor M. Castro
2020	J	`jnl`	Polar labeling: silver standard algorithm for training disease classifiers. Bioinform. Kavishwar B. Wagholikar, Hossein Estiri, Marykate Murphy, Shawn N. Murphy
2020	J	`jnl`	Transitive Sequencing Medical Records for Mining Predictive and Interpretable Temporal Representations. Patterns Hossein Estiri, Zachary H. Strasser, Jeffrey G. Klann, Thomas H. McCoy Jr., Kavishwar B. Wagholikar, Sebastien Vasey, Victor M. Castro, Marykate Murphy, Shawn N. Murphy
2019	Misc	`conf`	Dynamic Phenotyping to facilitate Accrual for Prospective Clinical studies: A Case Study in Heart Failure. AMIA Kavishwar B. Wagholikar, Christina M. Fischer, Alyssa P. Goodson, Christopher Herrick, Taylor Maclean, Katelyn Smith, Liliana Fera, Thomas Gaziano, Jacqueline Dunning, Joshua Bosque-Hamilton, Lina Matta, Eloy Toscano, Brent Richter, Layne Ainsworth, Michael Oates, Samuel J. Aronson, Calum A. MacRae, Benjamin Morgan Scirica, Akshay S. Desai, Shawn N. Murphy
2019	Misc	`conf`	Ontologies Enabling Computable Tables. AMIA Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Matthew A. Joss, Hossein Estiri, Kavishwar B. Wagholikar, Shawn N. Murphy
2019	Misc	`conf`	Patient Stratification Process for enabling Clinical Interventions. AMIA Kavishwar B. Wagholikar, Samuel J. Aronson, Benjamin Morgan Scirica, Akshay S. Desai, Shawn N. Murphy
2019	Misc	`conf`	Plugin for importing spreadsheets into Informatics for Integrating Biology and the Bedside platform. AMIA Akshay Zagade, Vishal Vernekar, Shek-Wayne Chan, Kavishwar B. Wagholikar, Rupendra Chulyadyo, Yuri Ostrovsky, Alyssa P. Goodson, Ameet Pathak, Christopher Herrick, Shawn N. Murphy
2019	Misc	`conf`	Stratification of Patient Population for enabling data-driven Clinical Interventions using I2b2. AMIA Kavishwar B. Wagholikar, Vishal Vernekar, Akshay Zagade, Yuri Ostrovsky, Shek-Wayne Chan, Alyssa P. Goodson, Ameet Pathak, Corey Glynn, Christopher Herrick, Shawn N. Murphy
2018	J	`jnl`	Extraction of Ejection Fraction from Echocardiography Notes for Constructing a Cohort of Patients having Heart Failure with reduced Ejection Fraction (HFrEF). J. Medical Syst. Kavishwar B. Wagholikar, Christina M. Fischer, Alyssa P. Goodson, Christopher D. Herrick, Martin Rees, Eloy Toscano, Calum A. MacRae, Benjamin M. Scirica, Akshay S. Desai, Shawn N. Murphy
2018	J	`jnl`	Implementation of informatics for integrating biology and the bedside (i2b2) platform as Docker containers. BMC Medical Informatics Decis. Mak. Kavishwar B. Wagholikar, Pralav P. Dessai, Javier Sanz, Michael Mendis, Douglas S. Bell, Shawn N. Murphy
2018	J	`jnl`	Improving the Accuracy of a Clinical Decision Support System for Cervical Cancer Screening and Surveillance. Appl. Clin. Inform. K. E. Ravikumar, Kathy L. MacLaughlin, Marianne R. Scheitel, Maya Kessler, Kavishwar B. Wagholikar, Hongfang Liu, Rajeev Chaudhry
2018	Misc	`conf`	Natural Language Processing to Detect High Information Findings for Patients at risk of Missed Diagnosis. AMIA Tzu-I Yang, Chia-Ching Chou, Kavishwar B. Wagholikar, Mitchell J. Feldman, Henry C. Chueh
2018	Misc	`conf`	On DXplain vocabulary development: Past and Present. AMIA Mitchell J. Feldman, Kavishwar B. Wagholikar, Kathleen Famiglietti, Richard J. Kim, Edward P. Hoffer, Henry C. Chueh
2018	J	`jnl`	Web services for data warehouses: OMOP and PCORnet on i2b2. J. Am. Medical Informatics Assoc. Jeffrey G. Klann, Lori C. Phillips, Christopher Herrick, Matthew A. Joss, Kavishwar B. Wagholikar, Shawn N. Murphy
2017	Misc	`conf`	Applying unsupervised learning to characterize rare observations in clinical data: the DQe-p tool. AMIA Hossein Estiri, Jeffrey G. Klann, Kavishwar B. Wagholikar, Shawn N. Murphy
2017	—	`conf`	Classifiers for Identifying the Medical Specialty of Clinical Documents. CRI Wei-Hung Weng, Kavishwar B. Wagholikar, Henry C. Chueh
2017	Misc	`conf`	Computing Performance Analysis on Clinical Document-level Classification. AMIA Wei-Hung Weng, Kavishwar B. Wagholikar, Henry Chueh
2017	—	`conf`	Evolving Research Data Sharing Networks to Clinical App Sharing Networks. CRI Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Joshua C. Mandel, Jeffrey G. Klann, Ricardo Colas, Prasad Patil, Kuladip Yadav, Kenneth D. Mandl, Shawn N. Murphy
2017	J	`jnl`	Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach. BMC Medical Informatics Decis. Mak. Wei-Hung Weng, Kavishwar B. Wagholikar, Alexa T. McCray, Peter Szolovits, Henry C. Chueh
2017	J	`jnl`	SMART-on-FHIR implemented over i2b2. J. Am. Medical Informatics Assoc. Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy
2017	Misc	`conf`	Web-Service-Enabled Apps for Research: SMART-on-FHIR for OMOP and PCORNet. AMIA Jeffrey G. Klann, Kavishwar B. Wagholikar, Lori C. Phillips, Matthew A. Joss, Shawn N. Murphy
2016	Misc	`conf`	Cajun Codefest 4.0 on SMART-on-FHIR apps for Diabetes. AMIA Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Henry Chu, Harshal Shah, Joshua C. Mandel, Jeffrey G. Klann, Sohail Rao, Kenneth D. Mandl, Shawn N. Murphy, Thomas Carton
2016	J	`jnl`	Erratum to: Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature. BMC Bioinform. Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Dingcheng Li, Jean-Pierre A. Kocher, Hongfang Liu
2016	Misc	`conf`	Evaluation of SMART-on-FHIR I2b2 cell using PCORNET data model. AMIA Kavishwar B. Wagholikar, Rahul Jain, Eliel Oliveira, Joshua C. Mandel, Jeffrey G. Klann, Prasad Patil, Kenneth D. Mandl, Shawn N. Murphy, Thomas Carton
2016	Misc	`conf`	Improving the Workflow of Curbside Consultation by Using Unstructured Clinical Notes - a Natural Language and Machine Learning-based Approach. AMIA Wei-Hung Weng, Avni Khatri, Kavishwar B. Wagholikar, Adam Cohen, Henry Chueh
2016	Misc	`conf`	Natural Language Processing Working Group Pre-Symposium: Graduate Student Consortium and 'Hackathon'. AMIA Stéphane M. Meystre, Hongfang Liu, Rong Xu, Sivaram Arabandi, Kavishwar B. Wagholikar, Jon D. Patrick, Guergana K. Savova, Chunhua Weng, Pierre Zweigenbaum, Dina Demner-Fushman, Özlem Uzuner, Hua Xu
2016	—	`conf`	Read only SMART on FHIR Façade for I2b2. CRI Kavishwar B. Wagholikar, Joshua C. Mandel, Jeffrey G. Klann, Nich Wattanasin, Michael Mendis, Christopher G. Chute, Kenneth D. Mandl, Shawn N. Murphy
2015	Misc	`conf`	Evaluation of the accuracy of CDS for cervical cancer screening and surveillance. AMIA Kathy L. MacLaughlin, Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Marianne R. Scheitel, Hongfang Liu, Rajeev Chaudhry
2015	J	`jnl`	Text mining facilitates database curation - extraction of mutation-disease associations from Bio-medical literature. BMC Bioinform. Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Dingcheng Li, Jean-Pierre A. Kocher, Hongfang Liu
2014	—	`conf`	Challenges in adapting text mining for full text articles to assist pathway curation. BCB K. E. Ravikumar, Kavishwar B. Wagholikar, Hongfang Liu
2014	J	`jnl`	Detecting concept mentions in biomedical text using hidden Markov model: multiple concept types at once or one at a time? J. Biomed. Semant. Manabu Torii, Kavishwar B. Wagholikar, Hongfang Liu
2014	Misc	`conf`	NLP enhances Quality Care Measures in Heart Failure. AMIA Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Hongfang Liu
2014	Misc	`conf`	Towards Pathway Curation Through Literature Mining - A Case Study Using PharmGKB. Pacific Symposium on Biocomputing K. E. Ravikumar, Kavishwar B. Wagholikar, Hongfang Liu
2013	J	`jnl`	Comprehensive temporal information detection from clinical text: medical events, time, and TLINK identification. J. Am. Medical Informatics Assoc. Sunghwan Sohn, Kavishwar B. Wagholikar, Dingcheng Li, Siddhartha Jonnalagadda, Cui Tao, Ravikumar Komandur Elayavilli, Hongfang Liu
2013	Misc	`conf`	Decision Support can Improve Time Efficiency of Healthcare Providers for Deciding Preventive Care Recommendations. AMIA Kavishwar B. Wagholikar, Ronald A. Hankey, Hongfang Liu, Rajeev Chaudhry
2013	—	`conf`	Integrated cTAKES for Concept Mention Detection and Normalization. CLEF (Working Notes) Hongfang Liu, Kavishwar B. Wagholikar, Siddhartha Jonnalagadda, Sunghwan Sohn
2013	J	`jnl`	Pooling annotated corpora for clinical concept extraction. J. Biomed. Semant. Kavishwar B. Wagholikar, Manabu Torii, Siddhartha Jonnalagadda, Hongfang Liu
2013	J	`jnl`	Research and applications: Formative evaluation of the accuracy of a clinical decision support system for cervical cancer screening. J. Am. Medical Informatics Assoc. Kavishwar B. Wagholikar, Kathy L. MacLaughlin, Thomas M. Kastner, Petra M. Casey, Michael R. Henry, Robert A. Greenes, Hongfang Liu, Rajeev Chaudhry
2012	Misc	`conf`	Asthma Status Identification with Natural Language Processing. AMIA Stephen T. Wu, Young J. Juhn, Sunghwan Sohn, Ravikumar Komandur Elayavilli, Kavishwar B. Wagholikar, Siddhartha Jonnalagadda, Hongfang Liu
2012	—	`conf`	Classifying protein complexes from candidate subgraphs using fuzzy machine learning model. BIBM Workshops Bo Xu, Hongfei Lin, Zhihao Yang, Kavishwar B. Wagholikar, Hongfang Liu
2012	—	`conf`	Clinical Decision Support for Colonoscopy Surveillance Using Natural Language Processing. HISB Kavishwar B. Wagholikar, Sunghwan Sohn, Stephen T. Wu, Vinod Kaggal, Sheila Buehler, Robert A. Greenes, Tsung-Teh Wu, David W. Larson, Hongfang Liu, Rajeev Chaudhry, Lisa Boardman
2012	Misc	`conf`	Clinical Decision Support with Natural Language Processing for Cervical Cancer Screening. AMIA Kavishwar B. Wagholikar, Kathy L. MacLaughlin, Michael R. Henry, Robert A. Greenes, Ronald A. Hankey, Hongfang Liu, Rajeev Chaudhry
2012	J	`jnl`	Clinical decision support with automated text processing for cervical cancer screening. J. Am. Medical Informatics Assoc. Kavishwar B. Wagholikar, Kathy L. MacLaughlin, Michael R. Henry, Robert A. Greenes, Ronald A. Hankey, Hongfang Liu, Rajeev Chaudhry
2012	J	`jnl`	Coreference analysis in clinical notes: a multi-pass sieve with alternate anaphora resolution modules. J. Am. Medical Informatics Assoc. Siddhartha Jonnalagadda, Dingcheng Li, Sunghwan Sohn, Stephen Tze-Inn Wu, Kavishwar B. Wagholikar, Manabu Torii, Hongfang Liu
2012	J	`jnl`	Evaluation of Fuzzy Relation Method for Medical Decision Support. J. Medical Syst. Kavishwar B. Wagholikar, Sanjeev Mangrulkar, Ashok W. Deshpande, Vijayraghavan Sundararajan
2012	J	`jnl`	Modeling Paradigms for Medical Diagnostic Decision Support: A Survey and Future Directions. J. Medical Syst. Kavishwar B. Wagholikar, Vijayraghavan Sundararajan, Ashok W. Deshpande
2012	—	`conf`	Systematic Analysis of Cross-Institutional Medication Description Patterns in Clinical Notes. HISB Sunghwan Sohn, Sean P. Murphy, Siddhartha Jonnalagadda, Kavishwar B. Wagholikar, Stephen T. Wu, Christopher G. Chute, Hongfang Liu, Scott R. Halgrim
2012	Misc	`conf`	Towards a semantic lexicon for clinical natural language processing. AMIA Hongfang Liu, Stephen T. Wu, Dingcheng Li, Siddhartha Jonnalagadda, Sunghwan Sohn, Kavishwar B. Wagholikar, Peter J. Haug, Stanley M. Huff, Christopher G. Chute
2011	—	`conf`	Empirical Ontologies for Cohort Identification. TREC Stephen T. Wu, Kavishwar B. Wagholikar, Sunghwan Sohn, Vinod Kaggal, Hongfang Liu
2011	—	`conf`	Human gene/protein synonym dictionary from WikiLinks. BCB Kavishwar B. Wagholikar, Manabu Torii, Hongfang Liu
2011	J	`jnl`	Using machine learning for concept extraction on clinical documents from multiple data sources. J. Am. Medical Informatics Assoc. Manabu Torii, Kavishwar B. Wagholikar, Hongfang Liu
2008	J	`jnl`	Fuzzy relation based modeling for medical diagnostic decision support: Case studies. Int. J. Knowl. Based Intell. Eng. Syst. Kavishwar B. Wagholikar, Ashok W. Deshpande
2007	—	`conf`	Fuzzy Medical Diagnostic Decision Support with Semiautomatic Knowledge Acquisition: A Case Study in Infectious Diseases. IICAI Kavishwar B. Wagholikar, Ashok W. Deshpande
2005	—	`conf`	Fuzzy Modeling in Medical Diagnosis: A Case Study for Cardiovascular Diseases. IICAI Kavishwar B. Wagholikar, Shirish Sutar, Ashok W. Deshpande