Katherine J. Denby

11 papers B 1Journal 9Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
AgriFoodPy: a package for modelling food systems.
J. Open Source Softw.
Juan Cordero, Kevin Donkers, Ian Harrison, Sarah Bridle, Angelina Frankowska, Michelle Cain, Neil Ward, Jez Frendenburgh, Edward Pope, Alana Kluczkovski, Ximena Schmidt, Jacqueline Silva, Christian Reynolds, Katherine J. Denby, Bob Doherty, Aled Jones
2018 J jnl
Bringing numerous methods for expression and promoter analysis to a public cloud computing service.
Bioinform.
Krzysztof Polanski, Bo Gao, Sam A. Mason, Paul Brown, Sascha Ott, Katherine J. Denby, David L. Wild
2014 J jnl
Wigwams: identifying gene modules co-regulated across multiple biological conditions.
Bioinform.
Krzysztof Polanski, Johanna Rhodes, Claire Hill, Peijun Zhang, Dafyd J. Jenkins, Steven J. Kiddle, Aleksey Jironkin, Jim Beynon, Vicky Buchanan-Wollaston, Sascha Ott, Katherine J. Denby
2012 J jnl
Nonparametric Bayesian inference for perturbed and orthologous gene regulatory networks.
Bioinform.
Christopher A. Penfold, Vicky Buchanan-Wollaston, Katherine J. Denby, David L. Wild
2010 J jnl
A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series.
J. Comput. Biol.
Oliver Stegle, Katherine J. Denby, Emma J. Cooke, David L. Wild, Zoubin Ghahramani, Karsten M. Borgwardt
2010 J jnl
On reverse engineering of gene interaction networks using time course data with repeated measurements.
Bioinform.
Edward R. Morrissey, Miguel A. Juárez, Katherine J. Denby, Nigel J. Burroughs
2010 J jnl
Temporal clustering by affinity propagation reveals transcriptional modules in
Bioinform.
Steven J. Kiddle, Oliver P. F. Windram, Stuart McHattie, Andrew Meade, Jim Beynon, Vicky Buchanan-Wollaston, Katherine J. Denby, Sach Mukherjee
2009 B conf
A Robust Bayesian Two-Sample Test for Detecting Intervals of Differential Gene Expression in Microarray Time Series.
RECOMB
Oliver Stegle, Katherine J. Denby, David L. Wild, Zoubin Ghahramani, Karsten M. Borgwardt
2009 — conf
Discovering Temporal Patterns of Differential Gene Expression in Microarray Time Series.
GCB
Oliver Stegle, Katherine J. Denby, David L. Wild, Stuart McHattie, Andrew Meade, Zoubin Ghahramani, Karsten M. Borgwardt
2009 J jnl
Granger causality vs. dynamic Bayesian network inference: a comparative study.
BMC Bioinform.
Cunlu Zou, Katherine J. Denby, Jianfeng Feng
2009 J jnl
R/BHC: fast Bayesian hierarchical clustering for microarray data.
BMC Bioinform.
Richard S. Savage, Katherine A. Heller, Yang Xu, Zoubin Ghahramani, William M. Truman, Murray Grant, Katherine J. Denby, David L. Wild