Katherine A. Yelick

196 papers A* 6A 53B 21C 1Misc 4Journal 59Unranked 49

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Distributed-Memory Parallel Algorithms for Fixed-Radius Near Neighbor Graph Construction. CoRR Gabriel Raulet, Dmitriy Morozov, Aydin Buluç, Katherine A. Yelick
2025	—	`conf`	Scaling Graph Neural Networks for Particle Track Reconstruction. IPDPS (Workshops) Alok Tripathy, Alina Lazar, Xiangyang Ju, Paolo Calafiura, Katherine A. Yelick, Aydin Buluç
2025	J	`jnl`	Scaling Graph Neural Networks for Particle Track Reconstruction. CoRR Alok Tripathy, Alina Lazar, Xiangyang Ju, Paolo Calafiura, Katherine A. Yelick, Aydin Buluç
2025	J	`jnl`	Sparsity-Aware Communication for Distributed Graph Neural Network Training. CoRR Ujjaini Mukhopadhyay, Alok Tripathy, Oguz Selvitopi, Katherine A. Yelick, Aydin Buluç
2024	—	`conf`	Accelerating Multi-GPU Embedding Retrieval with PGAS-Style Communication for Deep Learning Recommendation Systems. SC Workshops Yuxin Chen, Aydin Buluç, Katherine A. Yelick, John D. Owens
2024	—	`conf`	Distributed Matrix-Based Sampling for Graph Neural Network Training. MLSys Alok Tripathy, Katherine A. Yelick, Aydin Buluç
2024	J	`jnl`	Exabiome: Advancing Microbial Science through Exascale Computing. Comput. Sci. Eng. Steven A. Hofmeyr, Aydin Buluç, Robert Riley, Rob Egan, Oguz Selvitopi, Leonid Oliker, Katherine A. Yelick, Migun Shakya, Brett Youtsey, Ariful Azad
2024	J	`jnl`	On Multilinear Inequalities of Holder-Brascamp-Lieb Type for Torsion-Free Discrete Abelian Groups. J. Log. Anal. Michael Christ, James Demmel, Nicholas Knight, Thomas Scanlon, Katherine A. Yelick
2024	A	`conf`	RDMA-Based Algorithms for Sparse Matrix Multiplication on GPUs. ICS Benjamin Brock, Aydin Buluç, Katherine A. Yelick
2024	B	`conf`	Sparsity-Aware Communication for Distributed Graph Neural Network Training. ICPP Ujjaini Mukhopadhyay, Alok Tripathy, Oguz Selvitopi, Katherine A. Yelick, Aydin Buluç
2023	—	`conf`	Designing Efficient SIMD Kernels for High Performance Sequence Alignment. IPDPS Workshops Doru-Thom Popovici, Muaaz Gul Awan, Giulia Guidi, Rob Egan, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick
2023	J	`jnl`	Distributed Matrix-Based Sampling for Graph Neural Network Training. CoRR Alok Tripathy, Katherine A. Yelick, Aydin Buluç
2023	J	`jnl`	Extreme-scale many-against-many protein similarity search. CoRR Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2023	B	`conf`	High-Performance Filters for GPUs. PPoPP Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey
2023	J	`jnl`	RDMA-Based Algorithms for Sparse Matrix Multiplication on GPUs. CoRR Benjamin Brock, Aydin Buluç, Katherine A. Yelick
2023	—	`conf`	Singleton Sieving: Overcoming the Memory/Speed Trade-Off in Exascale ACDA Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey
2022	B	`conf`	Atos: A Task-Parallel GPU Scheduler for Graph Analytics. ICPP Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens
2022	B	`conf`	Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. ICPP Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	J	`jnl`	Distributed-Memory Parallel Contig Generation for De Novo Long-Read Genome Assembly. CoRR Giulia Guidi, Gabriel Raulet, Daniel Rokhsar, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	A	`conf`	Extreme-Scale Many-against-Many Protein Similarity Search. SC Oguz Selvitopi, Saliya Ekanayake, Giulia Guidi, Muaaz G. Awan, Georgios A. Pavlopoulos, Ariful Azad, Nikos Kyrpides, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2022	J	`jnl`	High-Performance Filters For GPUs. CoRR Hunter McCoy, Steven A. Hofmeyr, Katherine A. Yelick, Prashant Pandey
2022	A	`conf`	Scalable Irregular Parallelism with GPUs: Getting CPUs Out of the Way. SC Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens
2021	—	`conf`	10 Years Later: Cloud Computing is Closing the Performance Gap. ICPE (Companion) Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler
2021	A	`conf`	Accelerating large scale SC Muaaz Gul Awan, Steven A. Hofmeyr, Rob Egan, Nan Ding, Aydin Buluç, Jack Deslippe, Leonid Oliker, Katherine A. Yelick
2021	B	`conf`	Asynchrony versus bulk-synchrony for a generalized N-body problem from genomics. PPoPP Marquita Ellis, Aydin Buluç, Katherine A. Yelick
2021	J	`jnl`	Atos: A Task-Parallel GPU Dynamic Scheduling Framework for Dynamic Irregular Computations. CoRR Yuxin Chen, Benjamin Brock, Serban D. Porumbescu, Aydin Buluç, Katherine A. Yelick, John D. Owens
2021	—	`conf`	BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and Overlapper. ACDA Giulia Guidi, Marquita Ellis, Daniel Rokhsar, Katherine A. Yelick, Aydin Buluç
2021	—	`conf`	CloudBank: Managed Services to Simplify Cloud Access for Computer Science Research and Education. PEARC Michael L. Norman, Vince Kellen, Shava Smallen, Brian DeMeulle, Shawn Strande, Ed Lazowska, Naomi Alterman, Rob Fatland, Sarah Stone, Amanda Tan, Katherine A. Yelick, Eric Van Dusen, James Mitchell
2021	A	`conf`	Distributed-Memory k-mer Counting on GPUs. IPDPS Israt Nisa, Prashant Pandey, Marquita Ellis, Leonid Oliker, Aydin Buluç, Katherine A. Yelick
2021	A	`conf`	Distributed-memory parallel algorithms for sparse times tall-skinny-dense matrix multiplication. ICS Oguz Selvitopi, Benjamin Brock, Israt Nisa, Alok Tripathy, Katherine A. Yelick, Aydin Buluç
2021	A	`conf`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. IPDPS Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2021	Misc	`conf`	QFAST: Conflating Search and Numerical Optimization for Scalable Quantum Circuit Synthesis. QCE Ed Younis, Koushik Sen, Katherine A. Yelick, Costin Iancu
2021	B	`conf`	SPAA'21 Panel Paper: Architecture-Friendly Algorithms versus Algorithm-Friendly Architectures. SPAA Guy E. Blelloch, William J. Dally, Margaret Martonosi, Uzi Vishkin, Katherine A. Yelick
2021	B	`conf`	Scaling Generalized N-Body Problems, A Case Study from Genomics. ICPP Marquita Ellis, Aydin Buluç, Katherine A. Yelick
2020	J	`jnl`	10 Years Later: Cloud Computing is Closing the Performance Gap. CoRR Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler
2020	J	`jnl`	ADEPT: a domain independent sequence alignment strategy for gpu architectures. BMC Bioinform. Muaaz G. Awan, Jack Deslippe, Aydin Buluç, Oguz Selvitopi, Steven A. Hofmeyr, Leonid Oliker, Katherine A. Yelick
2020	Misc	`conf`	Computing and Data Challenges in Climate Change. HiPC Katherine A. Yelick
2020	—	`conf`	GPU accelerated partial order multiple sequence alignment for long reads self-correction. IPDPS Workshops Francesco Peverelli, Lorenzo Di Tucci, Marco D. Santambrogio, Nan Ding, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	A	`conf`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. IPDPS Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. CoRR Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	Opportunities and Challenges for Next Generation Computing. CoRR Gregory D. Hager, Mark D. Hill, Katherine A. Yelick
2020	J	`jnl`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. CoRR Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2020	—	`conf`	Performance Trade-offs in GPU Communication: A Study of Host and Device-initiated Approaches. PMBS@SC Taylor L. Groves, Ben Brock, Yuxin Chen, Khaled Z. Ibrahim, Lenny Oliker, Nicholas J. Wright, Samuel Williams, Katherine A. Yelick
2020	J	`jnl`	PersGNN: Applying Topological Data Analysis and Geometric Deep Learning to Structure-Based Protein Function Prediction. CoRR Nicolas Swenson, Aditi S. Krishnapriyan, Aydin Buluç, Dmitriy Morozov, Katherine A. Yelick
2020	J	`jnl`	Reducing Communication in Graph Neural Network Training. CoRR Alok Tripathy, Katherine A. Yelick, Aydin Buluç
2020	A	`conf`	Reducing communication in graph neural network training. SC Alok Tripathy, Katherine A. Yelick, Aydin Buluç
2020	J	`jnl`	The Parallelism Motifs of Genomic Data Analysis. CoRR Katherine A. Yelick, Aydin Buluç, Muaaz G. Awan, Ariful Azad, Benjamin Brock, Rob Egan, Saliya Ekanayake, Marquita Ellis, Evangelos Georganas, Giulia Guidi, Steven A. Hofmeyr, Oguz Selvitopi, Cristina Teodoropol, Leonid Oliker
2020	J	`jnl`	The Road for Recovery: Aligning COVID-19 efforts and building a more resilient future. IEEE Data Eng. Bull. Meredith M. Lee, Alicia D. Johnson, Katherine A. Yelick, Jennifer T. Chayes
2020	J	`jnl`	diBELLA: Distributed Long Read to Long Read Alignment. CoRR Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2019	B	`conf`	BCL: A Cross-Platform Distributed Data Structures Library. ICPP Benjamin Brock, Aydin Buluç, Katherine A. Yelick
2019	—	`conf`	RDMA vs. RPC for Implementing Distributed Data Structures. IA3@SC Benjamin A. Brock, Yuxin Chen, Jiakun Yan, John D. Owens, Aydin Buluç, Katherine A. Yelick
2019	J	`jnl`	RDMA vs. RPC for Implementing Distributed Data Structures. CoRR Benjamin Brock, Yuxin Chen, Jiakun Yan, John D. Owens, Aydin Buluç, Katherine A. Yelick
2019	B	`conf`	diBELLA: Distributed Long Read to Long Read Alignment. ICPP Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	J	`jnl`	BCL: A Cross-Platform Distributed Container Library. CoRR Benjamin Brock, Aydin Buluç, Katherine A. Yelick
2018	—	`conf`	CHIUW 2018 Keynote. IPDPS Workshops Katherine A. Yelick
2018	A	`conf`	Communication-Avoiding Optimization Methods for Distributed Massive-Scale Sparse Inverse Covariance Estimation. AISTATS Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Leonid Oliker, Katherine A. Yelick, Sang-Yun Oh
2018	J	`jnl`	Extreme Scale De Novo Metagenome Assembly. CoRR Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	A	`conf`	Extreme scale de novo metagenome assembly. SC Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2018	A	`conf`	Indigo: A Domain-Specific Language for Fast, Portable Image Reconstruction. IPDPS Michael B. Driscoll, Benjamin Brock, Frank Ong, Jonathan I. Tamir, Hsiou-Yuan Liu, Michael Lustig, Armando Fox, Katherine A. Yelick
2017	J	`jnl`	Advanced Cyberinfrastructure for Science, Engineering, and Public Policy. CoRR Vasant G. Honavar, Katherine A. Yelick, Klara Nahrstedt, Holly E. Rushmeier, Jennifer Rexford, Mark D. Hill, Elizabeth Bradley, Elizabeth D. Mynatt
2017	J	`jnl`	Communication-Avoiding Optimization Methods for Massive-Scale Graphical Model Structure Learning. CoRR Penporn Koanantakool, Alnur Ali, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick
2017	J	`jnl`	Extreme-Scale De Novo Genome Assembly. CoRR Evangelos Georganas, Steven A. Hofmeyr, Rob Egan, Aydin Buluç, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2017	—	`conf`	MerBench: PGAS Benchmarks for High Performance Genome Assembly. PAW@SC Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
2017	—	`conf`	Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems. Euro-Par Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
2016	J	`jnl`	21st Century Computer Architecture. CoRR Mark D. Hill, Sarita V. Adve, Luis Ceze, Mary Jane Irwin, David R. Kaeli, Margaret Martonosi, Josep Torrellas, Thomas F. Wenisch, David A. Wood, Katherine A. Yelick
2016	J	`jnl`	Accelerating Science: A Computing Research Agenda. CoRR Vasant G. Honavar, Mark D. Hill, Katherine A. Yelick
2016	J	`jnl`	An Asynchronous Task-based Fan-Both Sparse Cholesky Solver. CoRR Mathias Jacquelin, Yili Zheng, Esmond Ng, Katherine A. Yelick
2016	A	`conf`	Communication-Avoiding Parallel Sparse-Dense Matrix-Matrix Multiplication. IPDPS Penporn Koanantakool, Ariful Azad, Aydin Buluç, Dmitriy Morozov, Sang-Yun Oh, Leonid Oliker, Katherine A. Yelick
2015	A	`conf`	HipMer: an extreme-scale de novo genome assembler. SC Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Steven A. Hofmeyr, Chaitanya Aluru, Rob Egan, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2015	A	`conf`	Parallel Hessian Assembly for Seismic Waveform Inversion Using Global Updates. IPDPS Scott French, Yili Zheng, Barbara Romanowicz, Katherine A. Yelick
2015	A	`conf`	merAligner: A Fully Parallel Sequence Aligner. IPDPS Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2014	A	`conf`	A Computation- and Communication-Optimal Parallel Direct 3-Body Algorithm. SC Penporn Koanantakool, Katherine A. Yelick
2014	—	`conf`	A Local-View Array Library for Partitioned Global Address Space C++ Programs. ARRAY@PLDI Amir Kamil, Yili Zheng, Katherine A. Yelick
2014	A	`conf`	An Evaluation of One-Sided and Two-Sided Communication Paradigms on Relaxed-Ordering Interconnect. IPDPS Khaled Z. Ibrahim, Paul Hargrove, Costin Iancu, Katherine A. Yelick
2014	—	`conf`	Evaluation of PGAS Communication Paradigms with Geometric Multigrid. PGAS Hongzhang Shan, Amir Kamil, Samuel Williams, Yili Zheng, Katherine A. Yelick
2014	A	`conf`	On the conditions for efficient interoperability with threads: an experience with PGAS languages using cray communication domains. ICS Khaled Z. Ibrahim, Katherine A. Yelick
2014	A	`conf`	Parallel De Bruijn Graph Construction and Traversal for De Novo Genome Assembly. SC Evangelos Georganas, Aydin Buluç, Jarrod Chapman, Leonid Oliker, Daniel Rokhsar, Katherine A. Yelick
2014	A	`conf`	UPC++: A PGAS Extension for C++. IPDPS Yili Zheng, Amir Kamil, Michael B. Driscoll, Hongzhang Shan, Katherine A. Yelick
2013	A	`conf`	A Communication-Optimal N-Body Algorithm for Direct Interactions. IPDPS Michael B. Driscoll, Evangelos Georganas, Penporn Koanantakool, Edgar Solomonik, Katherine A. Yelick
2013	J	`jnl`	Best paper awards: 26th international parallel and distributed processing symposium (IPDPS 2012). J. Parallel Distributed Comput. Leonid Oliker, Katherine A. Yelick
2013	J	`jnl`	Communication lower bounds and optimal algorithms for programs that reference arrays - Part 1. CoRR Michael Christ, James Demmel, Nicholas Knight, Thomas Scanlon, Katherine A. Yelick
2013	—	`conf`	Hierarchical Computation in the SPMD Programming Model. LCPC Amir Kamil, Katherine A. Yelick
2012	J	`jnl`	A preliminary evaluation of the hardware acceleration of the Cray Gemini interconnect for PGAS languages and comparison with MPI. SIGMETRICS Perform. Evaluation Rev. Hongzhang Shan, Nicholas J. Wright, John Shalf, Katherine A. Yelick, Marcus Wagner, Nathan Wichmann
2012	A	`conf`	Communication avoiding and overlapping for numerical linear algebra. SC Evangelos Georganas, Jorge González-Domínguez, Edgar Solomonik, Yili Zheng, Juan Touriño, Katherine A. Yelick
2012	—	`conf`	Keynote address: Moving a science workload to exascale computing. IISWC Katherine A. Yelick
2012	J	`jnl`	Optimization of Parallel Particle-to-Grid Interpolation on Leading Multicore Platforms. IEEE Trans. Parallel Distributed Syst. Kamesh Madduri, Jimmy Su, Samuel Williams, Leonid Oliker, Stéphane Ethier, Katherine A. Yelick
2011	A	`conf`	Exascale opportunities and challenges. HPDC Katherine A. Yelick
2011	J	`jnl`	The International Exascale Software Project roadmap. Int. J. High Perform. Comput. Appl. Jack J. Dongarra, Peter H. Beckman, Terry Moore, Patrick Aerts, Giovanni Aloisio, Jean-Claude Andre, David Barkai, Jean-Yves Berthou, Taisuke Boku, Bertrand Braunschweig, Franck Cappello, Barbara M. Chapman, Xuebin Chi, Alok N. Choudhary, Sudip S. Dosanjh, Thom H. Dunning, Sandro Fiore, Al Geist, Bill Gropp, Robert J. Harrison, Mark Hereld, Michael A. Heroux, Adolfy Hoisie, Koh Hotta, Zhong Jin, Yutaka Ishikawa, Fred Johnson, Sanjay Kale, Richard Kenway, David E. Keyes, Bill Kramer, Jesús Labarta, Alain Lichnewsky, Thomas Lippert, Bob Lucas, Barney Maccabe, Satoshi Matsuoka, Paul Messina, Peter Michielse, Bernd Mohr, Matthias S. Müller, Wolfgang E. Nagel, Hiroshi Nakashima, Michael E. Papka, Daniel A. Reed, Mitsuhisa Sato, Edward Seidel, John Shalf, David Skinner, Marc Snir, Thomas L. Sterling, Rick Stevens, Frederick H. Streitz, Bob Sugar, Shinji Sumimoto, William M. Tang, John A. Taylor, Rajeev Thakur, Anne E. Trefethen, Mateo Valero, Aad J. van der Steen, Jeffrey S. Vetter, Peg Williams, Robert W. Wisniewski, Katherine A. Yelick
2011	—	`ch.`	Titanium. Encyclopedia of Parallel Computing Katherine A. Yelick, Susan L. Graham, Paul N. Hilfinger, Dan Bonachea, Jimmy Su, Amir Kamil, Kaushik Datta, Phillip Colella, Tong Wen
2011	J	`jnl`	Tuning collective communication for Partitioned Global Address Space programming models. Parallel Comput. Rajesh Nishtala, Yili Zheng, Paul Hargrove, Katherine A. Yelick
2010	—	`ch.`	Auto-Tuning Stencil Computations on Multicore and Accelerators. Scientific Computing with Multicore and Accelerators Kaushik Datta, Samuel Williams, Vasily Volkov, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2010	—	`conf`	Hybrid PGAS runtime support for multicore nodes. PGAS Filip Blagojevic, Paul Hargrove, Costin Iancu, Katherine A. Yelick
2009	J	`jnl`	A view of the parallel computing landscape. Commun. ACM Krste Asanovic, Rastislav Bodík, James Demmel, Tony M. Keaveny, Kurt Keutzer, John Kubiatowicz, Nelson Morgan, David A. Patterson, Koushik Sen, John Wawrzynek, David Wessel, Katherine A. Yelick
2009	—	`conf`	Enforcing Textual Alignment of Collectives Using Dynamic Checks. LCPC Amir Kamil, Katherine A. Yelick
2009	—	`conf`	Improving Memory Subsystem Performance Using ViVA: Virtual Vector Architecture. ARCS Joseph Gebis, Leonid Oliker, John Shalf, Samuel Williams, Katherine A. Yelick
2009	A	`conf`	Memory-efficient optimization of Gyrokinetic particle-to-grid interpolation for multicore processors. SC Kamesh Madduri, Samuel Williams, Stéphane Ethier, Leonid Oliker, John Shalf, Erich Strohmaier, Katherine A. Yelick
2009	A	`conf`	Minimizing communication in sparse matrix solvers. SC Marghoob Mohiyuddin, Mark Hoemmen, James Demmel, Katherine A. Yelick
2009	J	`jnl`	Optimization and Performance Modeling of Stencil Computations on Modern Microprocessors. SIAM Rev. Kaushik Datta, Shoaib Kamil, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick
2009	J	`jnl`	Optimization of a lattice Boltzmann computation on state-of-the-art multicore platforms. J. Parallel Distributed Comput. Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2009	J	`jnl`	Optimization of sparse matrix-vector multiplication on emerging multicore platforms. Parallel Comput. Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel
2009	A	`conf`	Scaling communication-intensive applications on BlueGene/P using one-sided communication and overlap. IPDPS Rajesh Nishtala, Paul Hargrove, Dan Bonachea, Katherine A. Yelick
2009	—	`conf`	Scheduling dynamic parallelism on accelerators. Conf. Computing Frontiers Filip Blagojevic, Costin Iancu, Katherine A. Yelick, Matthew Curtis-Maury, Dimitrios S. Nikolopoulos, Benjamin Rose
2009	J	`jnl`	Technical perspective - Abstraction for parallelism. Commun. ACM Katherine A. Yelick
2009	A*	`conf`	Ten ways to waste a parallel computer. ISCA Katherine A. Yelick
2008	A	`conf`	Avoiding communication in sparse matrix computations. IPDPS James Demmel, Mark Hoemmen, Marghoob Mohiyuddin, Katherine A. Yelick
2008	J	`jnl`	DARPA's HPCS Program- History, Models, Tools, Languages. Adv. Comput. Jack J. Dongarra, Robert B. Graybill, William J. Harrod, Robert F. Lucas, Ewing L. Lusk, Piotr Luszczek, Janice McMahon, Allan Snavely, Jeffrey S. Vetter, Katherine A. Yelick, Sadaf R. Alam, Roy L. Campbell, Laura Carrington, Tzu-Yi Chen, Omid Khalili, Jeremy S. Meredith, Mustafa M. Tikir
2008	A	`conf`	Lattice Boltzmann simulation optimization on leading multicore platforms. IPDPS Samuel Williams, Jonathan Carter, Leonid Oliker, John Shalf, Katherine A. Yelick
2008	A	`conf`	Performance portable optimizations for loops containing communication operations. ICS Costin Iancu, Wei Chen, Katherine A. Yelick
2008	A	`conf`	Programming models for petascale to exascale. IPDPS Katherine A. Yelick
2008	A	`conf`	Stencil computation optimization and auto-tuning on state-of-the-art multicore architectures. SC Kaushik Datta, Mark Murphy, Vasily Volkov, Samuel Williams, Jonathan Carter, Leonid Oliker, David A. Patterson, John Shalf, Katherine A. Yelick
2007	A	`conf`	An adaptive mesh refinement benchmark for modern parallel programming languages. SC Tong Wen, Jimmy Su, Phillip Colella, Katherine A. Yelick, Noel Keen
2007	—	`conf`	Automatic Communication Performance Debugging in PGAS Languages. LCPC Jimmy Su, Katherine A. Yelick
2007	A	`conf`	Automatic nonblocking communication for partitioned global address space programs. ICS Wei-Yu Chen, Dan Bonachea, Costin Iancu, Katherine A. Yelick
2007	B	`conf`	Deadlock-free scheduling of X10 computations with bounded resources. SPAA Shivali Agarwal, Rajkishore Barik, Dan Bonachea, Vivek Sarkar, R. K. Shyamasundar, Katherine A. Yelick
2007	B	`conf`	Hierarchical Pointer Analysis for Distributed Programs. SAS Amir Kamil, Katherine A. Yelick
2007	J	`jnl`	Languages for High-Productivity Computing: the DARPA HPCS Language Project. Parallel Process. Lett. Ewing L. Lusk, Katherine A. Yelick
2007	A	`conf`	Multi-threading and one-sided communication in parallel LU factorization. SC Parry Husbands, Katherine A. Yelick
2007	A	`conf`	Optimization of sparse matrix-vector multiplication on emerging multicore platforms. SC Samuel Williams, Leonid Oliker, Richard W. Vuduc, John Shalf, Katherine A. Yelick, James Demmel
2007	J	`jnl`	Parallel Languages and Compilers: Perspective From the Titanium Experience. Int. J. High Perform. Comput. Appl. Katherine A. Yelick, Paul N. Hilfinger, Susan L. Graham, Dan Bonachea, Jimmy Su, Amir Kamil, Kaushik Datta, Phillip Colella, Tong Wen
2007	B	`conf`	Performance Portable Optimizations for Loops Containing Communication Operations. PACT Costin Iancu, Wei Chen, Katherine A. Yelick
2007	B	`ed.`	Proceedings of the 12th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2007, San Jose, California, USA, March 14-17, 2007 PPoPP Katherine A. Yelick, John M. Mellor-Crummey
2007	—	`conf`	Productivity and performance using partitioned global address space languages. PASCO Katherine A. Yelick, Dan Bonachea, Wei-Yu Chen, Phillip Colella, Kaushik Datta, Jason Duell, Susan L. Graham, Paul Hargrove, Paul N. Hilfinger, Parry Husbands, Costin Iancu, Amir Kamil, Rajesh Nishtala, Jimmy Su, Michael L. Welcome, Tong Wen
2007	J	`jnl`	Scientific Computing Kernels on the Cell Processor. Int. J. Parallel Program. Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick
2007	J	`jnl`	When cache blocking of sparse matrix vector multiply works and why. Appl. Algebra Eng. Commun. Comput. Rajesh Nishtala, Richard W. Vuduc, James Demmel, Katherine A. Yelick
2006	—	`conf`	Compilation Techniques for Partitioned Global Address Space Languages. LCPC Katherine A. Yelick
2006	J	`jnl`	Distributed Immersed Boundary Simulation in Titanium. SIAM J. Sci. Comput. Edward Givelberg, Katherine A. Yelick
2006	—	`conf`	Implicit and explicit optimizations for stencil computations. Memory System Performance and Correctness Shoaib Kamil, Kaushik Datta, Samuel Williams, Leonid Oliker, John Shalf, Katherine A. Yelick
2006	A	`conf`	Optimizing bandwidth limited problems using one-sided communication and overlap. IPDPS Christian Bell, Dan Bonachea, Rajesh Nishtala, Katherine A. Yelick
2006	A	`conf`	Particles and contiuum - Performance modeling and optimization of a high energy colliding beam simulation code. SC Hongzhang Shan, Erich Strohmaier, Ji Qiang, David H. Bailey, Katherine A. Yelick
2006	—	`conf`	Performance Advantages of Partitioned Global Address Space Languages. PVM/MPI Katherine A. Yelick
2006	B	`conf`	Performance Analysis of a High Energy Colliding Beam Simulation Code on Four HPC Architectures. ICPP Hongzhang Shan, Ji Qiang, Erich Strohmaier, Katherine A. Yelick
2006	A	`conf`	Poster reception - Optimized collectives for PGAS languages with one-sided communication. SC Dan Bonachea, Paul Hargrove, Rajesh Nishtala, Michael L. Welcome, Katherine A. Yelick
2006	—	`conf`	The potential of the cell processor for scientific computing. Conf. Computing Frontiers Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine A. Yelick
2005	A	`conf`	Automatic Support for Irregular Computations in a High-Level Language. IPDPS Jimmy Su, Katherine A. Yelick
2005	—	`conf`	Communication Optimizations for Fine-Grained UPC Applications. IEEE PACT Wei-Yu Chen, Costin Iancu, Katherine A. Yelick
2005	—	`conf`	Concurrency Analysis for Parallel Programs with Textually Aligned Barriers. LCPC Amir Kamil, Katherine A. Yelick
2005	—	`conf`	Impact of modern memory subsystems on cache optimizations for stencil computations. Memory System Performance Shoaib Kamil, Parry Husbands, Leonid Oliker, John Shalf, Katherine A. Yelick
2005	B	`conf`	Language innovations for HPCS. PPoPP Katherine A. Yelick
2005	A	`conf`	Making Sequential Consistency Practical in Titanium. SC Amir Kamil, Jimmy Su, Katherine A. Yelick
2005	B	`ed.`	Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP 2005, June 15-17, 2005, Chicago, IL, USA PPoPP Keshav Pingali, Katherine A. Yelick, Andrew S. Grimshaw
2005	J	`jnl`	Self-Adapting Linear Algebra Algorithms and Software. Proc. IEEE Richard Carl Demmel, Jack J. Dongarra, Victor Eijkhout, Erika Fuentes, Antoine Petitet, Richard W. Vuduc, R. Clint Whaley, Katherine A. Yelick
2005	—	`conf`	Titanium Performance and Potential: An NPB Experimental Study. LCPC Kaushik Datta, Dan Bonachea, Katherine A. Yelick
2004	A	`conf`	Array Prefetching for Irregular Array Accesses in Titanium. IPDPS Jimmy Su, Katherine A. Yelick
2004	A	`conf`	Evaluating support for global address space languages on the Cray X1. ICS Christian Bell, Wei-Yu Chen, Dan Bonachea, Katherine A. Yelick
2004	A	`conf`	Identifying Performance Bottlenecks on Modern Microarchitectures Using an Adaptable Probe. IPDPS Gorden Griem, Leonid Oliker, John Shalf, Katherine A. Yelick
2004	B	`conf`	Performance Models for Evaluation and Automatic Tuning of Symmetric Sparse Matrix-Vector Multiply. ICPP Benjamin C. Lee, Richard W. Vuduc, James Demmel, Katherine A. Yelick
2004	—	`conf`	Performance Tuning of Matrix Triple Products Based on Matrix Structure. PARA Eun-Jin Im, Ismail Bustany, Cleve Ashcraft, James Demmel, Katherine A. Yelick
2004	J	`jnl`	Sparsity: Optimization Framework for Sparse Matrix Kernels. Int. J. High Perform. Comput. Appl. Eun-Jin Im, Katherine A. Yelick, Richard W. Vuduc
2004	J	`jnl`	Special Issue on Automatic Performance Tuning. Int. J. High Perform. Comput. Appl. Katherine A. Yelick
2003	A	`conf`	A performance analysis of the Berkeley UPC compiler. ICS Parry Husbands, Costin Iancu, Katherine A. Yelick
2003	A	`conf`	An Evaluation of Current High-Performance Networks. IPDPS Christian Bell, Dan Bonachea, Yannick Cote, Jason Duell, Paul Hargrove, Parry Husbands, Costin Iancu, Michael L. Welcome, Katherine A. Yelick
2003	Misc	`conf`	Memory Hierarchy Optimizations and Performance ounds for Sparse A. International Conference on Computational Science Rich Vuduc, Attila Gyulassy, James Demmel, Katherine A. Yelick
2003	—	`conf`	Polynomial-Time Algorithms for Enforcing Sequential Consistency in SPMD Programs with Arrays. LCPC Wei-Yu Chen, Arvind Krishnamurthy, Katherine A. Yelick
2003	B	`conf`	Type Systems for Distributed Data Sharing. SAS Ben Liblit, Alex Aiken, Katherine A. Yelick
2002	A	`conf`	Memory-Intensive Benchmarks: IRAM vs. Cache-Based Machines. IPDPS Brian R. Gaeke, Parry Husbands, Xiaoye S. Li, Leonid Oliker, Katherine A. Yelick, Rupak Biswas
2002	A	`conf`	Performance optimizations and bounds for sparse matrix-vector multiply. SC Rich Vuduc, James Demmel, Katherine A. Yelick, Shoaib Kamil, Rajesh Nishtala, Benjamin C. Lee
2002	J	`jnl`	ROC-1: Hardware Support for Recovery-Oriented Computing. IEEE Trans. Computers David Oppenheimer, Aaron B. Brown, James Beck, Daniel Hettena, Jon Kuroda, Noah Treuhaft, David A. Patterson, Katherine A. Yelick
2001	J	`jnl`	Hardware/compiler codevelopment for an embedded media processor. Proc. IEEE Christoforos E. Kozyrakis, David Judd, Joseph Gebis, Samuel Williams, David A. Patterson, Katherine A. Yelick
2001	Misc	`conf`	Optimizing Sparse Matrix Computations for Register Reuse in SPARSITY. International Conference on Computational Science (1) Eun-Jin Im, Katherine A. Yelick
2000	—	`conf`	Exploiting On-Chip Memory Bandwidth in the VIRAM Compiler. Intelligent Memory Systems David Judd, Katherine A. Yelick, Christoforos E. Kozyrakis, David R. Martin, David A. Patterson
2000	B	`conf`	Performance Analysis of an H.263 Video Encoder for VIRAM. ICIP Thinh P. Q. Nguyen, Avideh Zakhor, Katherine A. Yelick
1999	—	`conf`	Cluster I/O with River: Making the Fast Case Common. IOPADS Remzi H. Arpaci-Dusseau, Eric Anderson, Noah Treuhaft, David E. Culler, Joseph M. Hellerstein, David A. Patterson, Katherine A. Yelick
1999	—	`conf`	Optimizing Sparse Matrix Vector Multiplication on SMP. PP Eun-Jin Im, Katherine A. Yelick
1999	—	`conf`	Titanium: A High Performance Java Dialect. PP Arvind Krishnamurthy, Alexander Aiken, Phillip Colella, David Gay, Susan L. Graham, Paul N. Hilfinger, Ben Liblit, Carleton Miyamoto, Geoff Pike, Luigi Semenzato, Katherine A. Yelick
1998	J	`jnl`	Titanium: A High-performance Java Dialect. Concurr. Pract. Exp. Katherine A. Yelick, Luigi Semenzato, Geoff Pike, Carleton Miyamoto, Ben Liblit, Arvind Krishnamurthy, Paul N. Hilfinger, Susan L. Graham, David Gay, Phillip Colella, Alex Aiken
1997	J	`jnl`	A case for intelligent RAM. IEEE Micro David A. Patterson, Thomas E. Anderson, Neal Cardwell, Richard Fromm, Kimberly Keeton, Christoforos E. Kozyrakis, Randi Thomas, Katherine A. Yelick
1997	C	`conf`	Intelligent RAM (IRAM): The Industrial Setting, Applications and Architectures. ICCD David A. Patterson, Krste Asanovic, Aaron B. Brown, Richard Fromm, Jason Golbus, Benjamin Gribstad, Kimberly Keeton, Christoforos E. Kozyrakis, David R. Martin, Stylianos Perissakis, Randi Thomas, Noah Treuhaft, Katherine A. Yelick
1997	J	`jnl`	Models and Scheduling Algorithms for Mixed Data and Task Parallel Programs. J. Parallel Distributed Comput. Soumen Chakrabarti, James Demmel, Katherine A. Yelick
1997	J	`jnl`	Scalable Processors in the Billion-Transistor Era: IRAM. Computer Christoforos E. Kozyrakis, Stylianos Perissakis, David A. Patterson, Thomas E. Anderson, Krste Asanovic, Neal Cardwell, Richard Fromm, Jason Golbus, Benjamin Gribstad, Kimberly Keeton, Randi Thomas, Noah Treuhaft, Katherine A. Yelick
1997	A*	`conf`	The Energy Efficiency of IRAM Architectures. ISCA Richard Fromm, Stylianos Perissakis, Neal Cardwell, Christoforos E. Kozyrakis, Bruce McGaughy, David A. Patterson, Thomas E. Anderson, Katherine A. Yelick
1996	J	`jnl`	Analyses and Optimizations for Shared Address Space Programs. J. Parallel Distributed Comput. Arvind Krishnamurthy, Katherine A. Yelick
1996	A*	`conf`	Evaluation of Architectural Support for Global Address-Based Communication in Large-Scale Parallel Machines. ASPLOS Arvind Krishnamurthy, Klaus E. Schauser, Chris J. Scheiman, Randolph Y. Wang, David E. Culler, Katherine A. Yelick
1996	—	`conf`	Performance Modeling and Composition: A Case Study in Cell Simulation. IPPS Steve G. Steinberg, Jun Yang, Katherine A. Yelick
1996	—	`conf`	Systems Support for Irregular Parallel Applications (Abstract). IRREGULAR Katherine A. Yelick
1995	A*	`conf`	Empirical Evaluation of the CRAY-T3D: A Compiler Perspective. ISCA Remzi H. Arpaci, David E. Culler, Arvind Krishnamurthy, Steve G. Steinberg, Katherine A. Yelick
1995	B	`conf`	Modeling the Benefits of Mixed Data and Task Parallelism. SPAA Soumen Chakrabarti, James Demmel, Katherine A. Yelick
1995	A*	`conf`	Optimizing Parallel Programs with Explicit Synchronization. PLDI Arvind Krishnamurthy, Katherine A. Yelick
1995	A	`conf`	Parallelizing the Phylogeny Problem. SC Jeff A. Jones, Katherine A. Yelick
1995	—	`conf`	Portable Parallel Irregular Applications. PSLS Katherine A. Yelick, Chih-Po Wen, Soumen Chakrabarti, Etienne Deprit, Jeff A. Jones, Arvind Krishnamurthy
1995	—	`conf`	Portable Runtime Support for Asynchronous Simulation. ICPP (2) Chih-Po Wen, Katherine A. Yelick
1995	—	`conf`	Runtime Support for Portable Distributed Data Structures. LCR Chih-Po Wen, Soumen Chakrabarti, Etienne Deprit, Arvind Krishnamurthy, Katherine A. Yelick
1994	—	`conf`	Connected components on distributed memory machines. Parallel Algorithms Arvind Krishnamurthy, Steven S. Lumetta, David E. Culler, Katherine A. Yelick
1994	J	`jnl`	Distributed Data Structures and Algorithms for Gröbner Basis Computation. LISP Symb. Comput. Soumen Chakrabarti, Katherine A. Yelick
1994	—	`conf`	Optimizing Parallel SPMD Programs. LCPC Arvind Krishnamurthy, Katherine A. Yelick
1993	A	`conf`	Common runtime support for high-performance parallel languages. SC Geoffrey C. Fox, Sanjay Ranka, Michael L. Scott, Allen D. Malony, James C. Browne, Marina C. Chen, Alok N. Choudhary, Thomas E. Cheatham, Janice E. Cuny, Rudolf Eigenmann, Amr F. Fahmy, Ian T. Foster, Dennis Gannon, Tomasz Haupt, Carl Kesselman, Charles Koelbel, Wei Li, Monica S. Lam, Thomas J. LeBlanc, Jim Openshaw, David A. Padua, Constantine D. Polychronopoulos, Joel H. Saltz, Alan Sussman, Gil Weigand, Katherine A. Yelick
1993	B	`conf`	Implementing an Irregular Application on a Distributed Memory Multiprocessor. PPoPP Soumen Chakrabarti, Katherine A. Yelick
1993	—	`conf`	On the Correctness of a Distributed Memory Gröbner basis Algorithm. RTA Soumen Chakrabarti, Katherine A. Yelick
1993	A	`conf`	Parallel programming in Split-C. SC David E. Culler, Andrea C. Dusseau, Seth Copen Goldstein, Arvind Krishnamurthy, Steven Lumetta, Thorsten von Eicken, Katherine A. Yelick
1993	A	`conf`	Parallel timing simulation on a distributed memory multiprocessor. ICCAD Chih-Po Wen, Katherine A. Yelick
1992	A	`conf`	A Parallel Completion Procedure for Term Rewriting Systems. CADE Katherine A. Yelick, Stephen J. Garland
1992	—	`conf`	Programming Models for Irregular Applications. SIGPLAN Workshop Katherine A. Yelick
1992	—	`ch.`	Using Moded Type Systems to Support Abstraction in Logic Programs. Types in Logic Programming Joseph L. Zachary, Katherine A. Yelick
1990	—	`conf`	Parallel Completion. Dagstuhl Seminar on Parallelization in Inference Systems Katherine A. Yelick
1989	A*	`conf`	Moded Type Systems for Logic Programming. POPL Katherine A. Yelick, Joseph L. Zachary
1987	J	`jnl`	Unification in Combinations of Collapse-Free Regular Theories. J. Symb. Comput. Katherine A. Yelick
1985	—	`conf`	Combining Unification Algorithms for Confined Regular Equational Theories. RTA Katherine A. Yelick