Katharina T. Huber

90 papers A 1C 5Journal 81Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Buneman graphs, partial splits and subtree distances. Discret. Appl. Math. David Bryant, Katharina T. Huber, Vincent Moulton, Andreas Spillner
2025	J	`jnl`	Cherry picking in forests: A new characterization for the unrooted hybrid number of two phylogenetic trees. Discret. Math. Theor. Comput. Sci. Katharina T. Huber, Simone Linz, Vincent Moulton
2025	J	`jnl`	Is this network proper forest-based? Inf. Process. Lett. Katharina T. Huber, Leo van Iersel, Vincent Moulton, Guillaume E. Scholz
2025	J	`jnl`	Subtree Distances, Tight Spans and Diversities. CoRR David Bryant, Katharina T. Huber, Vincent Moulton, Andreas Spillner
2024	J	`jnl`	Encoding Semi-Directed Phylogenetic Networks with Quarnets. CoRR Katharina T. Huber, Leo van Iersel, Mark Jones, Vincent Moulton, Leonie Veenema-Nipius
2024	J	`jnl`	Orienting undirected phylogenetic networks. J. Comput. Syst. Sci. Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
2024	J	`jnl`	Phylogenetic Trees Defined by at Most Three Characters. Electron. J. Comb. Katharina T. Huber, Simone Linz, Vincent Moulton, Charles Semple
2024	J	`jnl`	Shared Ancestry Graphs and Symbolic Arboreal Maps. SIAM J. Discret. Math. Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
2023	J	`jnl`	Computing consensus networks for collections of 1-nested phylogenetic networks. J. Graph Algorithms Appl. Katharina T. Huber, Vincent Moulton, Andreas Spillner
2023	J	`jnl`	Diversities and the Generalized Circumradius. Discret. Comput. Geom. David Bryant, Katharina T. Huber, Vincent Moulton, Paul F. Tupper
2023	J	`jnl`	Encoding and ordering Adv. Appl. Math. Andrew R. Francis, Katharina T. Huber, Vincent Moulton, Taoyang Wu
2023	J	`jnl`	Injective Split Systems. Graphs Comb. Marc Hellmuth, Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz, Peter F. Stadler
2023	J	`jnl`	Shared ancestry graphs and symbolic arboreal maps. CoRR Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
2022	J	`jnl`	Level-2 networks from shortest and longest distances. Discret. Appl. Math. Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami
2022	J	`jnl`	Overlaid species forests. Discret. Appl. Math. Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
2021	C	`conf`	Invited Talks. CIAC Henning Fernau, Katharina T. Huber, Joseph (Seffi) Naor
2021	J	`jnl`	Optimal realizations and the block decomposition of a finite metric space. Discret. Appl. Math. Katharina T. Huber, Vincent Moulton, Andreas Spillner
2021	C	`conf`	Phylogenetic Networks, A Way to Cope with Complex Evolutionary Processes. CIAC Katharina T. Huber
2020	J	`jnl`	Evolution through segmental duplications and losses: a Super-Reconciliation approach. Algorithms Mol. Biol. Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
2020	J	`jnl`	Phylogenetic networks that are their own fold-ups. Adv. Appl. Math. Katharina T. Huber, Guillaume E. Scholz
2020	J	`jnl`	Recognizing and realizing cactus metrics. Inf. Process. Lett. Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
2020	J	`jnl`	Weakly displaying trees in temporal tree-child network. CoRR Katharina T. Huber, Simone Linz, Vincent Moulton
2019	C	`ed.`	19th International Workshop on Algorithms in Bioinformatics, WABI 2019, Niagara Falls, NY, USA, September 8-10, 2019 WABI Katharina T. Huber, Dan Gusfield
2019	J	`jnl`	Hierarchies from Lowest Stable Ancestors in Nonbinary Phylogenetic Networks. J. Classif. Katharina T. Huber, Vincent Moulton, Taoyang Wu
2019	J	`jnl`	Recognizing and realizing cactus metrics. CoRR Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami
2019	J	`jnl`	Rooting for phylogenetic networks. CoRR Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple
2019	J	`jnl`	The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. Theor. Comput. Sci. Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
2019	J	`jnl`	The polytopal structure of the tight-span of a totally split-decomposable metric. Discret. Math. Katharina T. Huber, Jack H. Koolen, Vincent Moulton
2019	J	`jnl`	Three-Way Symbolic Tree-Maps and Ultrametrics. J. Classif. Katharina T. Huber, Vincent Moulton, Guillaume E. Scholz
2018	J	`jnl`	Beyond Representing Orthology Relations by Trees. Algorithmica Katharina T. Huber, Guillaume E. Scholz
2018	J	`jnl`	Combinatorial properties of triplet covers for binary trees. Adv. Appl. Math. Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Mike A. Steel
2018	J	`jnl`	Geometric medians in reconciliation spaces of phylogenetic trees. Inf. Process. Lett. Katharina T. Huber, Vincent Moulton, Marie-France Sagot, Blerina Sinaimeri
2018	—	`conf`	Reconstructing the History of Syntenies Through Super-Reconciliation. RECOMB-CG Mattéo Delabre, Nadia El-Mabrouk, Katharina T. Huber, Manuel Lafond, Vincent Moulton, Emmanuel Noutahi, Miguel Sautie Castellanos
2018	J	`jnl`	The complexity of comparing multiply-labelled trees by extending phylogenetic-tree metrics. CoRR Manuel Lafond, Nadia El-Mabrouk, Katharina T. Huber, Vincent Moulton
2017	J	`jnl`	From event labeled gene trees to species trees. CoRR Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
2017	J	`jnl`	Quarnet inference rules for level-1 networks. CoRR Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
2017	J	`jnl`	Reconstructing Phylogenetic Level-1 Networks from Nondense Binet and Trinet Sets. Algorithmica Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
2017	J	`jnl`	Recovering tree-child networks from shortest inter-taxa distance information. CoRR Magnus Bordewich, Katharina T. Huber, Vincent Moulton, Charles Semple
2017	J	`jnl`	Tree-based unrooted phylogenetic networks. CoRR Andrew R. Francis, Katharina T. Huber, Vincent Moulton
2016	J	`jnl`	Beyond representing orthology relations by trees. CoRR Katharina T. Huber, Guillaume E. Scholz
2016	J	`jnl`	Characterizing block graphs in terms of their vertex-induced partitions. Australas. J Comb. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
2015	J	`jnl`	Distinguished Minimal Topological Lassos. SIAM J. Discret. Math. Katharina T. Huber, George Kettleborough
2015	J	`jnl`	PSIKO2: a fast and versatile tool to infer population stratification on various levels in GWAS. Bioinform. Andrei-Alin Popescu, Katharina T. Huber
2014	J	`jnl`	A matroid associated with a phylogenetic tree. Discret. Math. Theor. Comput. Sci. Andreas W. M. Dress, Katharina T. Huber, Mike A. Steel
2014	J	`jnl`	Reconstructing phylogenetic level-1 networks from nondense binet and trinet sets. CoRR Katharina T. Huber, Leo van Iersel, Vincent Moulton, Céline Scornavacca, Taoyang Wu
2014	J	`jnl`	Representing Partitions on Trees. SIAM J. Discret. Math. Katharina T. Huber, Vincent Moulton, Charles Semple, Taoyang Wu
2014	J	`jnl`	Tree Reconstruction from Triplet Cover Distances. Electron. J. Comb. Katharina T. Huber, Mike A. Steel
2013	J	`jnl`	Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets. Algorithmica Katharina T. Huber, Vincent Moulton
2012	—	`book`	Basic Phylogenetic Combinatorics. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
2012	A	`conf`	Computing a Consensus of Multilabeled Trees. ALENEX Katharina T. Huber, Vincent Moulton, Andreas Spillner, Sabine Storandt, Radoslaw Suchecki
2012	J	`jnl`	From event-labeled gene trees to species trees. BMC Bioinform. Maribel Hernandez-Rosales, Marc Hellmuth, Nicolas Wieseke, Katharina T. Huber, Vincent Moulton, Peter F. Stadler
2012	J	`jnl`	Recognizing Treelike k-Dissimilarities. J. Classif. Sven Herrmann, Katharina T. Huber, Vincent Moulton, Andreas Spillner
2012	J	`jnl`	ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R. Bioinform. Andrei-Alin Popescu, Katharina T. Huber, Emmanuel Paradis
2011	J	`jnl`	'Lassoing' a phylogenetic tree I: Basic properties, shellings, and covers CoRR Andreas W. M. Dress, Katharina T. Huber, Michael Anthony Steel
2011	J	`jnl`	A Practical Algorithm for Reconstructing Level-1 Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. Katharina T. Huber, Leo van Iersel, Steven Kelk, Radoslaw Suchecki
2011	J	`jnl`	Blocks and Cut Vertices of the Buneman Graph. SIAM J. Discret. Math. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2011	J	`jnl`	Encoding and Constructing 1-Nested Phylogenetic Networks with Trinets CoRR Katharina T. Huber, Vincent Moulton
2011	J	`jnl`	Metrics on Multilabeled Trees: Interrelationships and Diameter Bounds. IEEE ACM Trans. Comput. Biol. Bioinform. Katharina T. Huber, Andreas Spillner, Radoslaw Suchecki, Vincent Moulton
2010	J	`jnl`	An Algorithm for Computing Cutpoints in Finite Metric Spaces. J. Classif. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
2010	J	`jnl`	Worst-case optimal approximation algorithms for maximizing triplet consistency within phylogenetic networks. J. Discrete Algorithms Jaroslaw Byrka, Pawel Gawrychowski, Katharina T. Huber, Steven Kelk
2009	J	`jnl`	A graph-theoretical invariant of topological spaces. Appl. Math. Lett. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2009	J	`jnl`	An algorithm for computing cutpoints in finite metric spaces CoRR Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
2009	J	`jnl`	Characterizing weak compatibility in terms of weighted quartets. Adv. Appl. Math. Stefan Grünewald, Katharina T. Huber, Vincent Moulton, Charles Semple, Andreas Spillner
2009	J	`jnl`	Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference. IEEE ACM Trans. Comput. Biol. Bioinform. Magnus Bordewich, Olivier Gascuel, Katharina T. Huber, Vincent Moulton
2009	J	`jnl`	PADRE: a package for analyzing and displaying reticulate evolution. Bioinform. Martin Lott, Andreas Spillner, Katharina T. Huber, Vincent Moulton
2008	J	`jnl`	Block realizations of finite metrics and the tight-span construction I: The embedding theorem. Appl. Math. Lett. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2008	J	`jnl`	Characterizing Cell-Decomposable Metrics. Electron. J. Comb. Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton, Andreas Spillner
2008	J	`jnl`	Compatible decompositions and block realizations of finite metrics. Eur. J. Comb. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2008	J	`jnl`	Counting vertices and cubes in median graphs of circular split systems. Eur. J. Comb. Y. B. Choe, Katharina T. Huber, Jacobus H. Koolen, Y. S. Kwon, Vincent Moulton
2008	J	`jnl`	Cut points in metric spaces. Appl. Math. Lett. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2008	J	`jnl`	The Complexity of Deriving Multi-Labeled Trees from Bipartitions. J. Comput. Biol. Katharina T. Huber, Martin Lott, Vincent Moulton, Andreas Spillner
2007	C	`conf`	An Algorithm for Computing Virtual Cut Points in Finite Metric Spaces. COCOA Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2007	—	`ch.`	Phylogenetic networks. Mathematics of Evolution and Phylogeny Vincent Moulton, Katharina T. Huber
2006	C	`conf`	Imputing Supertrees and Supernetworks from Quartets. WABI Barbara R. Holland, Glenn Conner, Katharina T. Huber, Vincent Moulton
2006	J	`jnl`	On the structure of the tight-span of a totally split-decomposable metric. Eur. J. Comb. Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2005	J	`jnl`	Delta additive and Delta ultra-additive maps, Gromov's trees, and the Farris transform. Discret. Appl. Math. Andreas W. M. Dress, Barbara R. Holland, Katharina T. Huber, Jack H. Koolen, Vincent Moulton, Jan Weyer-Menkhoff
2005	J	`jnl`	Four Characters Suffice to Convexly Define a Phylogenetic Tree. SIAM J. Discret. Math. Katharina T. Huber, Vincent Moulton, Michael Anthony Steel
2005	J	`jnl`	Identifying phylogenetic trees. Discret. Math. Magnus Bordewich, Katharina T. Huber, Charles Semple
2005	J	`jnl`	Recovering a phylogenetic tree using pairwise closure operations. Appl. Math. Lett. Katharina T. Huber, Vincent Moulton, Charles Semple, Mike A. Steel
2005	J	`jnl`	The tight span of an antipodal metric space - Part I: : Combinatorial properties. Discret. Math. Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2004	J	`jnl`	Recovering trees from well-separated multi-state characters. Discret. Math. Katharina T. Huber
2004	J	`jnl`	Replacing cliques by stars in quasi-median graphs. Discret. Appl. Math. Katharina T. Huber, Vincent Moulton, Charles Semple
2004	J	`jnl`	The Tight Span of an Antipodal Metric Space: Part II--Geometrical Properties. Discret. Comput. Geom. Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2003	J	`jnl`	Connectivity calculus. Appl. Math. Lett. Dietmar Cieslik, Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
2002	J	`jnl`	Antipodal Metrics and Split Systems. Eur. J. Comb. Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
2002	J	`jnl`	Quasi-median graphs from sets of partitions. Discret. Appl. Math. Hans-Jürgen Bandelt, Katharina T. Huber, Vincent Moulton
2002	J	`jnl`	The relation graph. Discret. Math. Katharina T. Huber, Vincent Moulton
2001	J	`jnl`	Six Points Suffice: How to Check for Metric Consistency. Eur. J. Comb. Andreas W. M. Dress, Katharina T. Huber, Jacobus H. Koolen, Vincent Moulton
2000	J	`jnl`	Affine Maps That Induce Polyhedral Complex Isomorphisms. Discret. Comput. Geom. Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton
1999	J	`jnl`	Some new perspectives regarding sparse continuous models for discrete data structures. Electron. Notes Discret. Math. Andreas W. M. Dress, Katharina T. Huber, Vincent Moulton