Kate Fultz Hollis

14 papers Misc 4Journal 6Unranked 4
YearRankTypeTitle / Venue / Authors
2024 J jnl
npj Digit. Medicine
William R. Hersh, Kate Fultz Hollis
2022 J jnl
J. Am. Medical Informatics Assoc.
Carolyn Petersen, Eta S. Berner, Anthony Cardillo, Kate Fultz Hollis, Kenneth W. Goodman, Ross Koppel, Diane M. Korngiebel, Christoph U. Lehmann, Anthony E. Solomonides, Vignesh Subbian
2022 J jnl
J. Am. Medical Informatics Assoc.
Christoph U. Lehmann, Kate Fultz Hollis, Carolyn Petersen, Paul R. DeMuro, Vignesh Subbian, Ross Koppel, Anthony E. Solomonides, Eta S. Berner, Eric C. Pan, Julia Adler-Milstein, Kenneth W. Goodman
2022 Misc conf
AMIA
Scott McGrath, Gretchen Purcell Jackson, Tiffany I. Leung, Felix Holl, Kate Fultz Hollis
2020 conf
MIE
Kate Fultz Hollis, Kirk Roberts, Steven Bedrick, William R. Hersh
2019 J jnl
Briefings Bioinform.
Jessica D. Tenenbaum, Krithika Bhuvaneshwar, Jane P. Gagliardi, Kate Fultz Hollis, Peilin Jia, Liang Ma, Radhakrishnan Nagarajan, Gopalkumar Rakesh, Vignesh Subbian, Shyam Visweswaran, Zhongming Zhao, Leon Rozenblit
2018 J jnl
J. Am. Medical Informatics Assoc.
Carolyn Petersen, Eta S. Berner, Peter J. Embí, Kate Fultz Hollis, Kenneth W. Goodman, Ross Koppel, Christoph U. Lehmann, Harold P. Lehmann, Sarah A. Maulden, Kyle A. McGregor, Anthony Solomonides, Vignesh Subbian, Enrique Terrazas, Peter Winkelstein
2017 conf
CRI
Chunhua Weng, Monika Ahuja, Kate Fultz Hollis, Bernie LaSalle, Shira H. Fischer, Anthony E. Solomonides, Judith R. Logan
2017 conf
CRI
Kate Fultz Hollis, Timothy E. Burdick, Mary Samuels, Peter Beninato
2017 J jnl
Appl. Clin. Inform.
Abu Saleh Mohammad Mosa, Kate Fultz Hollis, Umberto Tachinardi, William K. Barnett, L. Nelson Sanchez-Pinto, Peter J. Embí
2016 Misc conf
AMIA
Lazaro N. Sanchez-Pinto, Kate Fultz Hollis, Abu Saleh Mohammad Mosa, Judith Logan, Tony Solomonides
2016 conf
CRI
Kate Fultz Hollis
2015 Misc conf
AMIA
Michelle R. Hribar, Deborah Woodcock, Lazaro N. Sanchez-Pinto, Kate Fultz Hollis, Gene Ren
2014 Misc conf
AMIA
Deborah Woodcock, Steven S. Williamson, Dana Womack, Kimberley A. Gray, Kate Fultz Hollis, Michelle R. Hribar
redb/extractors/pe_extractors/pe_overlay.py
← Index redb/extractors/pe_extractors/pe_overlay.py python
from hashlib import md5, sha1, sha256
import inspect
from datetime import datetime, timezone
from typing import Any

import magic
from magika import Magika

from redb.extractors.enum import Tag
from redb.extractors.pe_extractor import PEExtractor
from redb.models.dataclasses import PEOverlay


class PEOverlayExtractor(PEExtractor):

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
        pe=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters,
            index_prefix,
            elastic_index,
            known_benign,
            known_malicious,
            pe,
        )
        self.elastic_index = self.index_prefix + "-pe_overlay"
        self.log.debug(inspect.currentframe().f_code.co_name)

    def tag(self):
        return Tag.PE_OVERLAY.value

    def _extract_pe_overlay(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        overlay = self.pe.get_overlay()
        if overlay:
            return PEOverlay(
                _id=sha256(overlay).hexdigest(),
                overlay_size=len(overlay),
                overlay_entropy=self.calculate_entropy(overlay),
                overlay_offset=self.pe.get_overlay_data_start_offset(),
                overlay_mimetype=magic.from_buffer(overlay, mime=True),
                overlay_type=magic.from_buffer(overlay),
                overlay_magika=Magika().identify_bytes(overlay).output.ct_label,
                overlay_sha256=sha256(overlay).hexdigest(),
                overlay_sha1=sha1(overlay).hexdigest(),
                overlay_md5=md5(overlay).hexdigest(),
            )
        return None

    def extract(self):
        try:
            self.log.debug(inspect.currentframe().f_code.co_name)
            overlay = self._extract_pe_overlay()
            # self.export_to_elastic([overlay])  # Let the exporters handle this
            return overlay
        except Exception as e:
            self.log.error(f"Error extracting PE overlay: {e}")
            return None

    def prepare_export_data(self, exporter_type: str) -> Any:
        if exporter_type == "ElasticsearchExporter":
            return self.extract()
        elif exporter_type == "ClickHouseExporter":
            overlay = self.extract()
            if overlay is None:
                return None
            
            data = []
            current_time = datetime.now(timezone.utc)
            
            data.append([
                self.sha256,              # sha256
                self.md5,                 # md5
                self.sha1,                # sha1
                overlay.overlay_size,     # overlay_size
                overlay.overlay_entropy,  # overlay_entropy
                overlay.overlay_offset,   # overlay_offset
                overlay.overlay_mimetype, # overlay_mimetype
                overlay.overlay_type,     # overlay_type
                overlay.overlay_magika,   # overlay_magika
                overlay.overlay_sha256,   # overlay_sha256
                overlay.overlay_sha1,     # overlay_sha1
                overlay.overlay_md5,      # overlay_md5
                current_time             # analysis_date
            ])
            
            column_names = [
                'sha256', 'md5', 'sha1', 'overlay_size', 'overlay_entropy',
                'overlay_offset', 'overlay_mimetype', 'overlay_type', 'overlay_magika',
                'overlay_sha256', 'overlay_sha1', 'overlay_md5',
                'analysis_date'
            ]
            
            if not data:
                return None

            column_type_names = [
                'FixedString(64)', 'FixedString(32)', 'FixedString(40)',
                'UInt64', 'Float64', 'UInt64',
                'LowCardinality(String)', 'LowCardinality(String)', 'LowCardinality(String)',
                'FixedString(64)', 'FixedString(40)', 'FixedString(32)',
                'DateTime64(3, \'UTC\')'
            ]

            return (data, column_names, column_type_names)

    def get_clickhouse_table(self) -> str:
        return "redb_pe_overlays"