Kai Wang

20 papers Journal 19Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
A comparative evaluation of computational models for RNA modification detection using nanopore sequencing with RNA004 chemistry.
Briefings Bioinform.
Yongji Zou, Mian Umair Ahsan, Joe Chan, Wen Meng, Shou-Jiang Gao, Yufei Huang, Kai Wang
2025 — conf
PhenoGPT2: A Multimodal Fine-tuned Large Language Models for Phenotype Extraction and Normalization from Clinical Text and Facial Images.
BCB
Quan Minh Nguyen, Mian Umair Ahsan, Zhanliang Wang, Kai Wang
2024 J jnl
Enhancing phenotype recognition in clinical notes using large language models: PhenoBCBERT and PhenoGPT.
Patterns
Jingye Yang, Cong Liu, Wendy Deng, Da Wu, Chunhua Weng, Yunyun Zhou, Kai Wang
2024 J jnl
Exploring the reversal curse and other deductive logical reasoning in BERT and GPT-based large language models.
Patterns
Da Wu, Jingye Yang, Kai Wang
2024 J jnl
Phenotype driven molecular genetic test recommendation for diagnosing pediatric rare disorders.
npj Digit. Medicine
Fangyi Chen, Priyanka Ahimaz, Quan M. Nguyen, Rachel Lewis, Wendy K. Chung, Casey N. Ta, Katherine M. Szigety, Sarah E. Sheppard, Ian M. Campbell, Kai Wang, Chunhua Weng, Cong Liu
2024 J jnl
Understanding YTHDF2-mediated mRNA degradation by m6A-BERT-Deg.
Briefings Bioinform.
Tinghe Zhang, Sumin Jo, Michelle Zhang, Kai Wang, Shou-Jiang Gao, Yufei Huang
2023 J jnl
Classification of integers based on residue classes via modern deep learning algorithms.
Patterns
Da Wu, Jingye Yang, Mian Umair Ahsan, Kai Wang
2023 J jnl
Enhancing Phenotype Recognition in Clinical Notes Using Large Language Models: PhenoBCBERT and PhenoGPT.
CoRR
Jingye Yang, Cong Liu, Wendy Deng, Da Wu, Chunhua Weng, Yunyun Zhou, Kai Wang
2023 J jnl
Multimodal Machine Learning Combining Facial Images and Clinical Texts Improves Diagnosis of Rare Genetic Diseases.
CoRR
Da Wu, Jingye Yang, Steven Klein, Cong Liu, Tzung-Chien Hsieh, Peter M. Krawitz, Chunhua Weng, Gholson J. Lyon, Jennifer M. Kalish, Kai Wang
2023 J jnl
Not All Large Language Models (LLMs) Succumb to the "Reversal Curse": A Comparative Study of Deductive Logical Reasoning in BERT and GPT Models.
CoRR
Jingye Yang, Da Wu, Kai Wang
2023 J jnl
On the Prime Number Divisibility by Deep Learning.
CoRR
Da Wu, Jingye Yang, Mian Umair Ahsan, Kai Wang
2022 J jnl
Expediting knowledge acquisition by a web framework for Knowledge Graph Exploration and Visualization (KGEV): case studies on COVID-19 and Human Phenotype Ontology.
BMC Medical Informatics Decis. Mak.
Jacqueline Peng, David Xu, Ryan Lee, Siwei Xu, Yunyun Zhou, Kai Wang
2020 J jnl
Detecting differential alternative splicing events in scRNA-seq with or without Unique Molecular Identifiers.
PLoS Comput. Biol.
Yu Hu, Kai Wang, Mingyao Li
2020 J jnl
Genome-wide detection of short tandem repeat expansions by long-read sequencing.
BMC Bioinform.
Qian Liu, Yao Tong, Kai Wang
2020 J jnl
Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder.
BMC Medical Informatics Decis. Mak.
Jacqueline Peng, Mengge Zhao, James M. Havrilla, Cong Liu, Chunhua Weng, Whitney Guthrie, Robert T. Schultz, Kai Wang, Yunyun Zhou
2019 J jnl
CircAST: Full-length Assembly and Quantification of Alternatively Spliced Isoforms in Circular RNAs.
Genom. Proteom. Bioinform.
Jing Wu, Yan Li, Cheng Wang, Yiqiang Cui, Tianyi Xu, Chang Wang, Xiao Wang, Jiahao Sha, Bin Jiang, Kai Wang, Zhibin Hu, Xuejiang Guo, Xiaofeng Song
2019 J jnl
Doc2Hpo: a web application for efficient and accurate HPO concept curation.
Nucleic Acids Res.
Cong Liu, Fabricio Sampaio Peres Kury, Ziran Li, Casey N. Ta, Kai Wang, Chunhua Weng
2009 J jnl
ATOM: a powerful gene-based association test by combining optimally weighted markers.
Bioinform.
Mingyao Li, Kai Wang, Struan F. A. Grant, Hakon Hakonarson, Chun Li
2009 J jnl
Multiple testing in genome-wide association studies via hidden Markov models.
Bioinform.
Zhi Wei, Wenguang Sun, Kai Wang, Hakon Hakonarson
2005 J jnl
FSSA: a novel method for identifying functional signatures from structural alignments.
Bioinform.
Kai Wang, Ram Samudrala