Jörn Walter

15 papers Journal 13Unranked 2
YearRankTypeTitle / Venue / Authors
2024 J jnl
EpiSegMix: a flexible distribution hidden Markov model with duration modeling for chromatin state discovery.
Bioinform.
Johanna Elena Schmitz, Nihit Aggarwal, Lukas Laufer, Jörn Walter, Abdulrahman Salhab, Sven Rahmann
2022 J jnl
Effects of Resistant Starch on Symptoms, Fecal Markers, and Gut Microbiota in Parkinson's Disease - The RESISTA-PD Trial.
Genom. Proteom. Bioinform.
Anouck Becker, Georges Pierre Schmartz, Laura Gröger, Nadja Liddy Grammes, Valentina Galata, Hannah Philippeit, Jacqueline Weiland, Nicole Ludwig, Eckart Meese, Sascha Tierling, Jörn Walter, Andreas Schwiertz, Jörg Spiegel, Gudrun Wagenpfeil, Klaus Faßbender, Andreas Keller, Marcus M. Unger
2021 J jnl
Machine learning for deciphering cell heterogeneity and gene regulation.
Nat. Comput. Sci.
Michael Scherer, Florian Schmidt, Olga Lazareva, Jörn Walter, Jan Baumbach, Marcel H. Schulz, Markus List
2020 J jnl
GeneTrail 3: advanced high-throughput enrichment analysis.
Nucleic Acids Res.
Nico Gerstner, Tim Kehl, Kerstin Lenhof, Anne Müller, Carolin Mayer, Lea Eckhart, Nadja Liddy Grammes, Caroline Diener, Martin Hart, Oliver Hahn, Jörn Walter, Tony Wyss-Coray, Eckart Meese, Andreas Keller, Hans-Peter Lenhof
2019 — conf
A Hybrid HMM Approach for the Dynamics of DNA Methylation.
HSB
Charalampos Kyriakopoulos, Pascal Giehr, Alexander Lück, Jörn Walter, Verena Wolf
2019 J jnl
Hidden Markov Modelling Reveals Neighborhood Dependence of Dnmt3a and 3b Activity.
IEEE ACM Trans. Comput. Biol. Bioinform.
Alexander Lück, Pascal Giehr, Karl Nordström, Jörn Walter, Verena Wolf
2018 J jnl
REGGAE: a novel approach for the identification of key transcriptional regulators.
Bioinform.
Tim Kehl, Lara Schneider, Kathrin Kattler, Daniel Stöckel, Jenny Wegert, Nico Gerstner, Nicole Ludwig, Ute Distler, Markus Schick, Ulrich Keller, Stefan Tenzer, Manfred Gessler, Jörn Walter, Andreas Keller, Norbert M. Graf, Eckart Meese, Hans-Peter Lenhof
2017 — conf
A Stochastic Model for the Formation of Spatial Methylation Patterns.
CMSB
Alexander Lück, Pascal Giehr, Jörn Walter, Verena Wolf
2016 J jnl
The Influence of Hydroxylation on Maintaining CpG Methylation Patterns: A Hidden Markov Model Approach.
PLoS Comput. Biol.
Pascal Giehr, Charalampos Kyriakopoulos, Gabriella Ficz, Verena Wolf, Jörn Walter
2015 J jnl
Identification and analysis of methylation call differences between bisulfite microarray and bisulfite sequencing data with statistical learning techniques.
BMC Bioinform.
Matthias Döring, Gilles Gasparoni, Jasmin Gries, Karl Nordström, Pavlo Lutsik, Jörn Walter, Nico Pfeifer
2014 J jnl
AKSmooth: Enhancing low-coverage bisulfite sequencing data via kernel-based smoothing.
J. Bioinform. Comput. Biol.
Junfang Chen, Pavlo Lutsik, Ruslan Akulenko, Jörn Walter, Volkhard Helms
2014 J jnl
BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives.
Nucleic Acids Res.
Daniel Becker, Pavlo Lutsik, Peter Ebert, Christoph Bock, Thomas Lengauer, Jörn Walter
2011 J jnl
BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing.
Nucleic Acids Res.
Pavlo Lutsik, Lars Feuerbach, Julia Arand, Thomas Lengauer, Jörn Walter, Christoph Bock
2007 J jnl
CpG Island Mapping by Epigenome Prediction.
PLoS Comput. Biol.
Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer
2005 J jnl
BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing.
Bioinform.
Christoph Bock, Sabine Reither, Thomas Mikeska, Martina Paulsen, Jörn Walter, Thomas Lengauer