Justin Bo-Kai Hsu

19 papers C 6Journal 13
YearRankTypeTitle / Venue / Authors
2025 C conf
AI-Enhanced MALDI-TOF MS Analysis for Important Peaks on Predicting Ciprofloxacin Resistance across Different Gram-Negative Bacteria.
CIBCB
Hsin-Yao Wang, Chia-Ru Chung, Wen-Rui Zhang, Li-Ching Wu, Justin Bo-Kai Hsu, Jang-Jih Lu, Jorng-Tzong Horng
2025 C conf
Alzheimer's Disease Risk Prediction in the Elderly: A Machine Learning Approach Combining Clinical Characteristics and Polygenic Risk Scores.
CIBCB
Justin Bo-Kai Hsu, Cheng-Yang Lee, Jia-Ruey Tsai, Vijesh Kumar Yadav, Chuan Huang, Tzu-Hao Chang
2025 C conf
Establishing a Cross-Population Machine Learning Model for Alzheimer's Disease Risk Prediction in the Taiwanese Population.
CIBCB
Justin Bo-Kai Hsu, Jia-Ruey Tsai, Shih-Han Hung, Cheng-Yang Lee, Chaur-Jong Hu, Tzu-Hao Chang
2025 C conf
Explainable AI-Enhanced Kinase Activity Profiling Through Phosphoproteomics.
CIBCB
Chia-Ru Chung, Ming-Feng Ho, Yun Tang, Li-Ching Wu, Justin Bo-Kai Hsu, Tzong-Yi Lee, Jorng-Tzong Horng
2025 C conf
Integrative Multi-Omics Prognostic Modeling of Glioma Recurrence Using Variational Autoencoder and Similarity Network Fusion.
CIBCB
Phuong Lam Tran, Yun Tang, Justin Bo-Kai Hsu, Tzong-Yi Lee
2025 C conf
Self-Attention Enhanced Deep Learning Models for Immune Cell Deconvolution from Bulk RNA-Seq.
CIBCB
Chia-Ru Chung, Yen-Lin Chen, Yun Tang, Justin Bo-Kai Hsu, Li-Ching Wu, Tzong-Yi Lee, Jorng-Tzong Horng
2022 J jnl
dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications.
Nucleic Acids Res.
Zhongyan Li, Shangfu Li, Mengqi Luo, Jhih-Hua Jhong, Wenshuo Li, Lantian Yao, Yuxuan Pang, Zhuo Wang, Rulan Wang, Renfei Ma, Jinhan Yu, Yuqi Huang, Xiaoning Zhu, Qifan Cheng, Hexiang Feng, Jiahong Zhang, Chunxuan Wang, Justin Bo-Kai Hsu, Wen-Chi Chang, Feng-Xiang Wei, Hsien-Da Huang, Tzong-Yi Lee
2019 J jnl
Characterization and identification of lysine glutarylation based on intrinsic interdependence between positions in the substrate sites.
BMC Bioinform.
Kai-Yao Huang, Hui-Ju Kao, Justin Bo-Kai Hsu, Shun-Long Weng, Tzong-Yi Lee
2017 J jnl
Investigation and identification of functional post-translational modification sites associated with drug binding and protein-protein interactions.
BMC Syst. Biol.
Min-Gang Su, Julia Tzu-Ya Weng, Justin Bo-Kai Hsu, Kai-Yao Huang, Yu-Hsiang Chi, Tzong-Yi Lee
2017 J jnl
MDD-carb: a combinatorial model for the identification of protein carbonylation sites with substrate motifs.
BMC Syst. Biol.
Hui-Ju Kao, Shun-Long Weng, Kai-Yao Huang, Fergie Joanda Kaunang, Justin Bo-Kai Hsu, Chien-Hsun Huang, Tzong-Yi Lee
2014 J jnl
Incorporating significant amino acid pairs and protein domains to predict RNA splicing-related proteins with functional roles.
J. Comput. Aided Mol. Des.
Justin Bo-Kai Hsu, Kai-Yao Huang, Julia Tzu-Ya Weng, Chien-Hsun Huang, Tzong-Yi Lee
2013 J jnl
An enhanced computational platform for investigating the roles of regulatory RNA and for identifying functional RNA motifs.
BMC Bioinform.
Tzu-Hao Chang, Hsi-Yuan Huang, Justin Bo-Kai Hsu, Shun-Long Weng, Jorng-Tzong Horng, Hsien-Da Huang
2012 J jnl
GPMiner: an integrated system for mining combinatorial cis-regulatory elements in mammalian gene group.
BMC Genom.
Tzong-Yi Lee, Wen-Chi Chang, Justin Bo-Kai Hsu, Tzu-Hao Chang, Dray-Ming Shien
2011 J jnl
RegPhos: a system to explore the protein kinase-substrate phosphorylation network in humans.
Nucleic Acids Res.
Tzong-Yi Lee, Justin Bo-Kai Hsu, Wen-Chi Chang, Hsien-Da Huang
2011 J jnl
miRTar: an integrated system for identifying miRNA-target interactions in Human.
BMC Bioinform.
Justin Bo-Kai Hsu, Chih-Min Chiu, Sheng-Da Hsu, Wei-Yun Huang, Chia-Hung Chien, Tzong-Yi Lee, Hsien-Da Huang
2010 J jnl
N-Ace: Using solvent accessibility and physicochemical properties to identify protein N-acetylation sites.
J. Comput. Chem.
Tzong-Yi Lee, Justin Bo-Kai Hsu, Feng-Mao Lin, Wen-Chi Chang, Po-Chiang Hsu, Hsien-Da Huang
2009 J jnl
Incorporating structural characteristics for identification of protein methylation sites.
J. Comput. Chem.
Dray-Ming Shien, Tzong-Yi Lee, Wen-Chi Chang, Justin Bo-Kai Hsu, Jorng-Tzong Horng, Po-Chiang Hsu, Ting-Yuan Wang, Hsien-Da Huang
2009 J jnl
Incorporating support vector machine for identifying protein tyrosine sulfation sites.
J. Comput. Chem.
Wen-Chi Chang, Tzong-Yi Lee, Dray-Ming Shien, Justin Bo-Kai Hsu, Jorng-Tzong Horng, Po-Chiang Hsu, Ting-Yuan Wang, Hsien-Da Huang, Rong-Long Pan
2007 J jnl
ViTa: prediction of host microRNAs targets on viruses.
Nucleic Acids Res.
Paul Wei-Che Hsu, Li-Zen Lin, Sheng-Da Hsu, Justin Bo-Kai Hsu, Hsien-Da Huang