Jurgen Fripp - RankMe

133 papers A* 1A 1B 8Misc 10Journal 48Unranked 64

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Accuracy of TrUE-Net in comparison to established white matter hyperintensity segmentation methods: An independent validation study. NeuroImage Jeremy F. Strain, Maryam Rahmani, Donna L. Dierker, Christopher J. Owen, Hussain Jafri, Andrei G. Vlassenko, Kyle B. Womack, Jurgen Fripp, Duygu Tosun, Tammie L. S. Benzinger, Michael Weiner, Colin L. Masters, Jin-Moo Lee, John C. Morris, Manu S. Goyal
2024	J	`jnl`	Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative. Medical Image Anal. Boyeong Woo, Craig Engstrom, William Baresic, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2023	—	`conf`	An Informatics Platform for the Management of Data for Australian Dementia Network (ADNeT) Initiative. MedInfo Julie Trinder, Pierrick Bourgeat, Ying Xia, Jurgen Fripp, Parnesh Raniga
2023	J	`jnl`	Disease progression modelling of Alzheimer's disease using probabilistic principal components analysis. NeuroImage Martin Saint-Jalmes, Victor Fedyashov, Daniel Beck, Timothy Baldwin, Noel G. Faux, Pierrick Bourgeat, Jurgen Fripp, Colin L. Masters, Benjamin Goudey
2023	J	`jnl`	Early brain morphometrics from neonatal MRI predict motor and cognitive outcomes at 2-years corrected age in very preterm infants. NeuroImage Alex M. Pagnozzi, Liza van Eijk, Kerstin Pannek, Roslyn N. Boyd, Susmita Saha, Joanne George, Samudragupta Bora, DanaKai Bradford, Michael Fahey, Michael Ditchfield, Atul Malhotra, Helen G. Liley, Paul B. Colditz, Stephen E. Rose, Jurgen Fripp
2023	J	`jnl`	Functional re-organization of hippocampal-cortical gradients during naturalistic memory processes. NeuroImage Léonie Borne, Ye Tian, Michelle K. Lupton, Johan N. van der Meer, Jayson Jeganathan, Bryan Paton, Nikitas C. Koussis, Christine C. Guo, Gail A. Robinson, Jurgen Fripp, Andrew Zalesky, Michael Breakspear
2023	J	`jnl`	Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering. CoRR Zhijian Yang, Junhao Wen, Ahmed Abdulkadir, Yuhan Cui, Güray Erus, Elizabeth Mamourian, Randa Melhem, Dhivya Srinivasan, Sindhuja T. Govindarajan, Jiong Chen, Mohamad Habes, Colin L. Masters, Paul Maruff, Jurgen Fripp, Luigi Ferrucci, Marilyn S. Albert, Sterling C. Johnson, John C. Morris, Pamela LaMontagne, Daniel S. Marcus, Tammie L. S. Benzinger, David A. Wolk, Li Shen, Jingxuan Bao, Susan M. Resnick, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos
2023	—	`conf`	Generalization Properties of Geometric 3D Deep Learning Models for Medical Segmentation. ISBI Léo Lebrat, Rodrigo Santa Cruz, Reuben Dorent, Javier Urriola Yaksic, Alex M. Pagnozzi, Gregg Belous, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2023	—	`conf`	Medical Shape Pattern Analysis with MeshCNN. ISBI Sze-Nung Leung, Jason A. Dowling, Jurgen Fripp, Kai-Kai Shen, Shekhar S. Chandra
2023	—	`conf`	Semantic Segmentation of 3D Medical Images Through a Kaleidoscope: Data from the Osteoarthritis Initiative. MIDL Boyeong Woo, Marlon Bran Lorenzana, Craig Engstrom, William Baresic, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2023	—	`conf`	When to Use Augmentation - Variability Insufficient for Cortical Thickness Estimation Improvement. ISBI Filip Rusak, Rodrigo Santa Cruz, Hilda Chourak, Elliot Smith, Jurgen Fripp, Clinton Fookes, Pierrick Bourgeat, Andrew P. Bradley
2022	—	`conf`	Anomaly-Aware 3D Segmentation of Knee Magnetic Resonance Images. MIDL Boyeong Woo, Craig Engstrom, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2022	J	`jnl`	Automated anomaly-aware 3D segmentation of bones and cartilages in knee MR images from the Osteoarthritis Initiative. CoRR Boyeong Woo, Craig Engstrom, William Baresic, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2022	—	`conf`	CorticalFlow MICCAI (5) Rodrigo Santa Cruz, Léo Lebrat, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2022	J	`jnl`	CorticalFlow CoRR Rodrigo Santa Cruz, Léo Lebrat, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2022	J	`jnl`	CorticalFlow: A Diffeomorphic Mesh Deformation Module for Cortical Surface Reconstruction. CoRR Léo Lebrat, Rodrigo Santa Cruz, Frédéric de Gournay, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2022	—	`conf`	Lesser of Two Evils Improves Learning in the Context of Cortical Thickness Estimation Models - Choose Wisely. DALI@MICCAI Filip Rusak, Rodrigo Santa Cruz, Elliot Smith, Jurgen Fripp, Clinton Fookes, Pierrick Bourgeat, Andrew P. Bradley
2022	J	`jnl`	Open-Source Hypothalamic-ForniX (OSHy-X) Atlases and Segmentation Tool for 3T and 7T. J. Open Source Softw. Jeryn Chang, Frederik Steyn, Shyuan Ngo, Robert Henderson, Christine Cong Guo, Steffen Bollmann, Jurgen Fripp, Markus Barth, Thomas B. Shaw
2022	J	`jnl`	Quantifiable brain atrophy synthesis for benchmarking of cortical thickness estimation methods. Medical Image Anal. Filip Rusak, Rodrigo Santa Cruz, Léo Lebrat, Ondrej Hlinka, Jurgen Fripp, Elliot Smith, Clinton Fookes, Andrew P. Bradley, Pierrick Bourgeat
2022	—	`conf`	Trans-ResNet: Integrating Transformers and CNNs for Alzheimer's disease classification. ISBI Chao Li, Yue Cui, Na Luo, Yong Liu, Pierrick Bourgeat, Jurgen Fripp, Tianzi Jiang
2022	J	`jnl`	β-amyloid PET harmonisation across longitudinal studies: Application to AIBL, ADNI and OASIS3. NeuroImage Pierrick Bourgeat, Vincent Doré, Samantha Burnham, Tammie L. S. Benzinger, Duygu Tosun, Shenpeng Li, Manu S. Goyal, Pamela LaMontagne, Liang Jin, Christopher C. Rowe, Michael W. Weiner, John C. Morris, Colin L. Masters, Jurgen Fripp, Victor L. Villemagne
2021	A*	`conf`	CorticalFlow: A Diffeomorphic Mesh Transformer Network for Cortical Surface Reconstruction. NeurIPS Léo Lebrat, Rodrigo Santa Cruz, Frédéric de Gournay, Darren Fu, Pierrick Bourgeat, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2021	A	`conf`	DeepCSR: A 3D Deep Learning Approach for Cortical Surface Reconstruction. WACV Rodrigo Santa Cruz, Léo Lebrat, Pierrick Bourgeat, Clinton Fookes, Jurgen Fripp, Olivier Salvado
2021	—	`conf`	Detail Matters: High-Frequency Content for Realistic Synthetic MRI Generation. SASHIMI@MICCAI Filip Rusak, Rodrigo Santa Cruz, Elliot Smith, Jurgen Fripp, Clinton Fookes, Pierrick Bourgeat, Andrew P. Bradley
2021	—	`conf`	Going Deeper With Brain Morphometry Using Neural Networks. ISBI Rodrigo Santa Cruz, Léo Lebrat, Pierrick Bourgeat, Vincent Doré, Jason Dowling, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2021	J	`jnl`	Non-negative matrix factorisation improves Centiloid robustness in longitudinal studies. NeuroImage Pierrick Bourgeat, Vincent Doré, James Doecke, David Ames, Colin L. Masters, Christopher C. Rowe, Jurgen Fripp, Victor L. Villemagne
2021	J	`jnl`	SA-LuT-Nets: Learning Sample-Adaptive Intensity Lookup Tables for Brain Tumor Segmentation. IEEE Trans. Medical Imaging Biting Yu, Luping Zhou, Lei Wang, Wanqi Yang, Ming Yang, Pierrick Bourgeat, Jurgen Fripp
2021	—	`conf`	Smocam: Smooth Conditional Attention Mask For 3d-Regression Models. ISBI Salamata Konate, Léo Lebrat, Rodrigo Santa Cruz, Pierrick Bourgeat, Vincent Doré, Jurgen Fripp, Andrew P. Bradley, Clinton Fookes, Olivier Salvado
2021	—	`conf`	Towards a generalization of the MP2RAGE partial volume estimation model to account for B1 ISBI Jeremy Beaumont, Oscar Acosta, Parnesh Raniga, Giulio Gambarota, Jurgen Fripp
2020	—	`conf`	3D Brain MRI GAN-Based Synthesis Conditioned on Partial Volume Maps. SASHIMI@MICCAI Filip Rusak, Rodrigo Santa Cruz, Pierrick Bourgeat, Clinton Fookes, Jurgen Fripp, Andrew P. Bradley, Olivier Salvado
2020	J	`jnl`	Brain microstructure and morphology of very preterm-born infants at term equivalent age: Associations with motor and cognitive outcomes at 1 and 2 years. NeuroImage Kerstin Pannek, Joanne George, Roslyn N. Boyd, Paul B. Colditz, Stephen E. Rose, Jurgen Fripp
2020	J	`jnl`	DeepCSR: A 3D Deep Learning Approach for Cortical Surface Reconstruction. CoRR Rodrigo Santa Cruz, Léo Lebrat, Pierrick Bourgeat, Clinton Fookes, Jurgen Fripp, Olivier Salvado
2020	J	`jnl`	Fabric Image Representation Encoding Networks for Large-scale 3D Medical Image Analysis. CoRR Siyu Liu, Wei Dai, Craig Engstrom, Jurgen Fripp, Peter B. Greer, Stuart Crozier, Jason A. Dowling, Shekhar S. Chandra
2020	—	`conf`	Fast High Dynamic Range MRI by Contrast Enhancement Networks. ISBI Matthew Marques, Craig Engstrom, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2020	J	`jnl`	Going deeper with brain morphometry using neural networks. CoRR Rodrigo Santa Cruz, Léo Lebrat, Pierrick Bourgeat, Vincent Doré, Jason Dowling, Jurgen Fripp, Clinton Fookes, Olivier Salvado
2020	J	`jnl`	Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan. NeuroImage Raymond Pomponio, Güray Erus, Mohamad Habes, Jimit Doshi, Dhivya Srinivasan, Elizabeth Mamourian, Vishnu Bashyam, Ilya M. Nasrallah, Theodore D. Satterthwaite, Yong Fan, Lenore J. Launer, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Christos Davatzikos
2020	—	`conf`	Learning Sample-Adaptive Intensity Lookup Table for Brain Tumor Segmentation. MICCAI (4) Biting Yu, Luping Zhou, Lei Wang, Wanqi Yang, Ming Yang, Pierrick Bourgeat, Jurgen Fripp
2020	J	`jnl`	Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging. CoRR Vishnu M. Bashyam, Jimit Doshi, Güray Erus, Dhivya Srinivasan, Ahmed Abdulkadir, Mohamad Habes, Yong Fan, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Theodore D. Satterthwaite, Daniel H. Wolf, Raquel E. Gur, Ruben C. Gur, John C. Morris, Marilyn S. Albert, Hans Jörgen Grabe, Susan M. Resnick, R. Nick Bryan, David A. Wolk, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos
2020	J	`jnl`	Predicting motor outcome in preterm infants from very early brain diffusion MRI using a deep learning convolutional neural network (CNN) model. NeuroImage Susmita Saha, Alex M. Pagnozzi, Pierrick Bourgeat, Joanne George, DanaKai Bradford, Paul B. Colditz, Roslyn N. Boyd, Stephen E. Rose, Jurgen Fripp, Kerstin Pannek
2020	J	`jnl`	Sample-Adaptive GANs: Linking Global and Local Mappings for Cross-Modality MR Image Synthesis. IEEE Trans. Medical Imaging Biting Yu, Luping Zhou, Lei Wang, Yinghuan Shi, Jurgen Fripp, Pierrick Bourgeat
2019	J	`jnl`	Ea-GANs: Edge-Aware Generative Adversarial Networks for Cross-Modality MR Image Synthesis. IEEE Trans. Medical Imaging Biting Yu, Luping Zhou, Lei Wang, Yinghuan Shi, Jurgen Fripp, Pierrick Bourgeat
2019	—	`conf`	High Contrast T1-Weigthed Mri with Fluid and White Matter Suppression Using Mp2Rage. ISBI Jeremy Beaumont, Hervé Saint-Jalmes, Oscar Acosta, Tobias Kober, Mark Tanner, Jean-Christophe Ferré, Olivier Salvado, Jurgen Fripp, Giulio Gambarota
2019	—	`conf`	Identification of Functional Connectivity Features in Depression Subtypes Using a Data-Driven Approach. GLMI@MICCAI Xingjuan Li, Samantha Burnham, Jurgen Fripp, Yu Li, Xue Li, Amir Fazlollahi, Pierrick Bourgeat
2019	J	`jnl`	Non-linear realignment improves hippocampus subfield segmentation reliability. NeuroImage Thomas B. Shaw, Steffen Bollmann, Nicole T. Atcheson, Lachlan T. Strike, Christine Cong Guo, Katie L. McMahon, Jurgen Fripp, Margaret J. Wright, Olivier Salvado, Markus Barth
2019	J	`jnl`	Quantifying deep grey matter atrophy using automated segmentation approaches: A systematic review of structural MRI studies. NeuroImage Alex M. Pagnozzi, Jurgen Fripp, Stephen E. Rose
2018	—	`conf`	3D cGAN based cross-modality MR image synthesis for brain tumor segmentation. ISBI Biting Yu, Luping Zhou, Lei Wang, Jurgen Fripp, Pierrick Bourgeat
2018	—	`conf`	A Framework to Objectively Identify Reference Regions for Normalizing Quantitative Imaging. MICCAI (1) Amir Fazlollahi, Scott Ayton, Pierrick Bourgeat, Ibrahima Diouf, Parnesh Raniga, Jurgen Fripp, James Doecke, David Ames, Colin L. Masters, Christopher C. Rowe, Victor L. Villemagne, Ashley I. Bush, Olivier Salvado
2018	J	`jnl`	A lightweight rapid application development framework for biomedical image analysis. Comput. Methods Programs Biomed. Shekhar S. Chandra, Jason A. Dowling, Craig Engstrom, Ying Xia, Anthony Paproki, Ales Neubert, David Rivest-Hénault, Olivier Salvado, Stuart Crozier, Jurgen Fripp
2018	—	`conf`	Data Augmentation Using Synthetic Lesions Improves Machine Learning Detection of Microbleeds from MRI. SASHIMI@MICCAI Saba Momeni, Amir Fazlollahi, Pierrick Bourgeat, Parnesh Raniga, Paul A. Yates, Nawaf Yassi, Patricia M. Desmond, Jurgen Fripp, Yongsheng Gao, Olivier Salvado
2018	J	`jnl`	Implementing the centiloid transformation for NeuroImage Pierrick Bourgeat, Vincent Doré, Jurgen Fripp, David Ames, Colin L. Masters, Olivier Salvado, Victor L. Villemagne, Christopher C. Rowe
2018	—	`conf`	Investigating Brain Age Deviation in Preterm Infants: A Deep Learning Approach. DATRA/PIPPI@MICCAI Susmita Saha, Alex M. Pagnozzi, Joanne George, Paul B. Colditz, Roslyn N. Boyd, Stephen E. Rose, Jurgen Fripp, Kerstin Pannek
2018	—	`conf`	MRI Denoising and Artefact Removal Using Self-Organizing Maps for Fast Global Block-Matching. Patch-MI@MICCAI Lee B. Reid, Ashley Gillman, Alex M. Pagnozzi, José V. Manjón, Jurgen Fripp
2018	J	`jnl`	MRI white matter lesion segmentation using an ensemble of neural networks and overcomplete patch-based voting. Comput. Medical Imaging Graph. José V. Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Patricia M. Desmond, Jurgen Fripp, Olivier Salvado
2017	J	`jnl`	3D Scanning System for Automatic High-Resolution Plant Phenotyping. CoRR Chuong V. Nguyen, Jurgen Fripp, David R. Lovell, Robert Furbank, Peter Kuffner, Helen Daily, Xavier Sirault
2017	—	`conf`	A normalisation framework for quantitative brain imaging; application to quantitative susceptibility mapping. ISBI Amir Fazlollahi, Scott Ayton, Pierrick Bourgeat, Parnesh Raniga, Amanda Ng, Jurgen Fripp, David Ames, Colin L. Masters, Christopher C. Rowe, Victor L. Villemagne, Ashley I. Bush, Olivier Salvado
2017	—	`conf`	A spatio-temporal atlas of neonatal diffusion MRI based on kernel ridge regression. ISBI Kai-Kai Shen, Jurgen Fripp, Kerstin Pannek, Joanne George, Paul B. Colditz, Roslyn N. Boyd, Stephen E. Rose
2017	—	`conf`	Automated cartilage segmentation from 3D MR images of hip joint using an ensemble of neural networks. ISBI Ying Xia, José V. Manjón, Craig Engstrom, Stuart Crozier, Olivier Salvado, Jurgen Fripp
2017	J	`jnl`	Evaluation and comparison of 3D intervertebral disc localization and segmentation methods for 3D T2 MR data: A grand challenge. Medical Image Anal. Guoyan Zheng, Chengwen Chu, Daniel L. Belavy, Bulat Ibragimov, Robert Korez, Tomaz Vrtovec, Hugo Hutt, Richard M. Everson, Judith Meakin, Isabel Lopez Andrade, Ben Glocker, Hao Chen, Qi Dou, Pheng-Ann Heng, Chunliang Wang, Daniel Forsberg, Ales Neubert, Jurgen Fripp, Martin Urschler, Darko Stern, Maria Wimmer
2017	—	`conf`	PET-only 18F-AV1451 tau quantification. ISBI Pierrick Bourgeat, Victor L. Villemagne, Vincent Doré, Colin L. Masters, David Ames, Christopher C. Rowe, Olivier Salvado, Jurgen Fripp
2016	Misc	`conf`	3D Scanning System for Automatic High-Resolution Plant Phenotyping. DICTA Chuong V. Nguyen, Jurgen Fripp, David R. Lovell, Robert Furbank, Peter Kuffner, Helen Daily, Xavier Sirault
2016	—	`conf`	Anatomical hubs from spectral clustering of structural connectomes. ISBI Jhimli Mitra, Soumya Ghose, Pierrick Bourgeat, Jurgen Fripp, Jane L. Mathias, Stephen E. Rose, Olivier Salvado
2016	Misc	`conf`	Automated Plant and Leaf Separation: Application in 3D Meshes of Wheat Plants. DICTA Kirill Frolov, Jurgen Fripp, Chuong V. Nguyen, Robert Furbank, Geoff Bull, Peter Kuffner, Helen Daily, Xavier Sirault
2016	—	`conf`	Automated segmentation and T2-mapping of the posterior cruciate ligament from MRI of the knee: Data from the osteoarthritis initiative. ISBI Anthony Paproki, Katharine J. Wilson, Rachel K. Surowiec, Charles P. Ho, Abinash Pant, Pierrick Bourgeat, Craig Engstrom, Stuart Crozier, Jurgen Fripp
2016	—	`conf`	CapAIBL: Automated Reporting of Cortical PET Quantification Without Need of MRI on Brain Surface Using a Patch-Based Method. Patch-MI@MICCAI Vincent Doré, Pierrick Bourgeat, Victor L. Villemagne, Jurgen Fripp, Lance S. Macaulay, Colin L. Masters, David Ames, Christopher Rowe, Olivier Salvado
2016	—	`conf`	HIST: HyperIntensity Segmentation Tool. Patch-MI@MICCAI José V. Manjón, Pierrick Coupé, Parnesh Raniga, Ying Xia, Jurgen Fripp, Olivier Salvado
2016	—	`conf`	Incremental shape learning of 3D surfaces of the knee, data from the osteoarthritis initiative. ISBI Ales Neubert, Ibrahim Naser, Anthony Paproki, Craig Engstrom, Jurgen Fripp, Stuart Crozier, Shekhar S. Chandra
2016	Misc	`conf`	Maximum Pseudolikelihood Estimation for Mixture-Markov Random Field Segmentation of the Brain. DICTA Amy Chan, Ian A. Wood, Jurgen Fripp
2016	J	`jnl`	Statistical machine learning to identify traumatic brain injury (TBI) from structural disconnections of white matter networks. NeuroImage Jhimli Mitra, Kai-Kai Shen, Soumya Ghose, Pierrick Bourgeat, Jurgen Fripp, Olivier Salvado, Kerstin Pannek, D. Jamie Taylor, Jane L. Mathias, Stephen E. Rose
2015	J	`jnl`	Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge. NeuroImage David M. Cash, Chris Frost, Leonardo O. Iheme, Devrim Ünay, Melek Kandemir, Jurgen Fripp, Olivier Salvado, Pierrick Bourgeat, Martin Reuter, Bruce Fischl, Marco Lorenzi, Giovanni B. Frisoni, Xavier Pennec, Ronald K. Pierson, Jeffrey L. Gunter, Matthew L. Senjem, Clifford R. Jack Jr., Nicolas Guizard, Vladimir S. Fonov, D. Louis Collins, Marc Modat, M. Jorge Cardoso, Kelvin K. Leung, Hongzhi Wang, Sandhitsu R. Das, Paul A. Yushkevich, Ian B. Malone, Nick C. Fox, Jonathan M. Schott, Sébastien Ourselin
2015	—	`conf`	Automated Intervertebral Disc Segmentation Using Probabilistic Shape Estimation and Active Shape Models. CSI@MICCAI Ales Neubert, Jurgen Fripp, Shekhar S. Chandra, Craig Engstrom, Stuart Crozier
2015	B	`conf`	Computational analysis of PET by AIBL (CapAIBL): a cloud-based processing pipeline for the quantification of PET images. Image Processing Pierrick Bourgeat, Vincent Doré, Jurgen Fripp, Victor L. Villemagne, Christopher Rowe, Olivier Salvado
2015	B	`conf`	Heritability analysis of surface-based cortical thickness estimation on a large twin cohort. Image Processing Kai-Kai Shen, Vincent Doré, Stephen E. Rose, Jurgen Fripp, Katie L. McMahon, Greig I. de Zubicaray, Nicholas G. Martin, Paul M. Thompson, Margaret J. Wright, Olivier Salvado
2015	J	`jnl`	On the Use of Coupled Shape Priors for Segmentation of Magnetic Resonance Images of the Knee. IEEE J. Biomed. Health Informatics Jincheng Pang, Jeffrey B. Driban, Timothy E. McAlindon, José G. Tamez-Peña, Jurgen Fripp, Eric L. Miller
2015	J	`jnl`	Robust inverse-consistent affine CT-MR registration in MRI-assisted and MRI-alone prostate radiation therapy. Medical Image Anal. David Rivest-Hénault, Nicholas D. H. Dowson, Peter B. Greer, Jurgen Fripp, Jason A. Dowling
2015	J	`jnl`	Statistical shape model reconstruction with sparse anomalous deformations: Application to intervertebral disc herniation. Comput. Medical Imaging Graph. Ales Neubert, Jurgen Fripp, Craig Engstrom, Daniel Schwarz, Marc-André Weber, Stuart Crozier
2015	—	`conf`	Uninformative Frame Detection in Colonoscopy Through Motion, Edge and Color Features. CARE@MICCAI Mohammad Ali Armin, Girija Chetty, Jurgen Fripp, Hans de Visser, Cédric Dumas, Amir Fazlollahi, Florian Grimpen, Olivier Salvado
2014	—	`conf`	Fast Multiatlas Selection Using Composition of Transformations for Radiation Therapy Planning. MCV David Rivest-Hénault, Soumya Ghose, Josien P. W. Pluim, Peter B. Greer, Jurgen Fripp, Jason A. Dowling
2014	J	`jnl`	Focused shape models for hip joint segmentation in 3D magnetic resonance images. Medical Image Anal. Shekhar S. Chandra, Ying Xia, Craig Engstrom, Stuart Crozier, Raphael Schwarz, Jurgen Fripp
2014	J	`jnl`	Investigating brain connectivity heritability in a twin study using diffusion imaging data. NeuroImage Kai-Kai Shen, Stephen E. Rose, Jurgen Fripp, Katie L. McMahon, Greig I. de Zubicaray, Nicholas G. Martin, Paul M. Thompson, Margaret J. Wright, Olivier Salvado
2014	J	`jnl`	Lesion segmentation from multimodal MRI using random forest following ischemic stroke. NeuroImage Jhimli Mitra, Pierrick Bourgeat, Jurgen Fripp, Soumya Ghose, Stephen E. Rose, Olivier Salvado, Alan Connelly, Bruce Campbell, Susan Palmer, Gagan Sharma, Soren Christensen, Leeanne Carey
2013	—	`conf`	Classification Forests and Markov Random Field to Segment Chronic Ischemic Infarcts from Multimodal MRI. MBIA Jhimli Mitra, Pierrick Bourgeat, Jurgen Fripp, Soumya Ghose, Stephen E. Rose, Olivier Salvado, Alan Connelly, Bruce Campbell, Susan Palmer, Gagan Sharma, Soren Christensen, Leeanne Carey
2013	J	`jnl`	Research and applications: MilxXplore: a web-based system to explore large imaging datasets. J. Am. Medical Informatics Assoc. Pierrick Bourgeat, Vincent Doré, Victor Villemagne, Christopher Rowe, Olivier Salvado, Jurgen Fripp
2013	J	`jnl`	Research and applications: Three-dimensional morphological and signal intensity features for detection of intervertebral disc degeneration from magnetic resonance images. J. Am. Medical Informatics Assoc. Ales Neubert, Jurgen Fripp, Craig Engstrom, Duncan Walker, Marc-André Weber, Raphael Schwarz, Stuart Crozier
2013	—	`conf`	Structure-Guided Nonrigid Registration of CT-MR Pelvis Scans with Large Deformations in MR-Based Image Guided Radiation Therapy. CLIP David Rivest-Hénault, Peter B. Greer, Jurgen Fripp, Jason Dowling
2012	B	`conf`	A surface based approach for cortical thickness comparison between PiB+ and PiB- healthy control subjects. Image Processing Vincent Doré, Pierrick Bourgeat, Jurgen Fripp, Oscar Acosta, Gaël Chételat, Cassandra Szoeke, Kathryn A. Ellis, Ralph N. Martins, Victor Villemagne, Colin L. Masters, David Ames, Christopher Rowe, Olivier Salvado
2012	—	`conf`	Combining imaging and clinical data in manifold learning: Distance-based and graph-based extensions of Laplacian Eigenmaps. ISBI Jean-Baptiste Fiot, Jurgen Fripp, Laurent D. Cohen
2012	B	`conf`	Consistent estimation of shape parameters in statistical shape model by symmetric EM algorithm. Image Processing Kai-Kai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Mériaudeau, Olivier Salvado
2012	J	`jnl`	Constrained reverse diffusion for thick slice interpolation of 3D volumetric MRI images. Comput. Medical Imaging Graph. Ales Neubert, Olivier Salvado, Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp
2012	J	`jnl`	Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models. NeuroImage Kai-Kai Shen, Jurgen Fripp, Fabrice Mériaudeau, Gaël Chételat, Olivier Salvado, Pierrick Bourgeat
2012	—	`conf`	Local vs Global Descriptors of Hippocampus Shape Evolution for Alzheimer's Longitudinal Population Analysis. STIA Jean-Baptiste Fiot, Laurent Risser, Laurent D. Cohen, Jurgen Fripp, François-Xavier Vialard
2012	—	`conf`	MR-Less Surface-Based Amyloid Estimation by Subject-Specific Atlas Selection and Bayesian Fusion. MICCAI (2) Luping Zhou, Olivier Salvado, Vincent Doré, Pierrick Bourgeat, Parnesh Raniga, Victor Villemagne, Christopher Rowe, Jurgen Fripp
2012	Misc	`conf`	Morphology-Based Interslice Interpolation on Manual Segmentations of Joint Bones and Muscles in MRI. DICTA Zhengyi Yang, Stuart Crozier, Craig Engstrom, Raphael Schwarz, Lars Lauer, Jurgen Fripp, Shekhar Chandra, Ying Xia, Ales Neubert, Olivier Salvado, Tania Brancato
2012	J	`jnl`	Patient Specific Prostate Segmentation in 3-D Magnetic Resonance Images. IEEE Trans. Medical Imaging Shekhar S. Chandra, Jason Dowling, Kai-Kai Shen, Parnesh Raniga, Josien P. W. Pluim, Peter B. Greer, Olivier Salvado, Jurgen Fripp
2012	—	`conf`	Unilateral hip joint segmentation with shape priors learned from missing data. ISBI Shekhar Chandra, Ying Xia, Craig Engstrom, Raphael Schwarz, Lars Lauer, Stuart Crozier, Olivier Salvado, Jurgen Fripp
2011	Misc	`conf`	Automated 3D Segmentation and Analysis of Cotton Plants. DICTA Anthony Paproki, Jurgen Fripp, Olivier Salvado, Xavier Sirault, Scott Berry, Robert Furbank
2011	Misc	`conf`	Automated 3D Segmentation of Vertebral Bodies and Intervertebral Discs from MRI. DICTA Ales Neubert, Jurgen Fripp, Kai-Kai Shen, Olivier Salvado, Raphael Schwarz, Lars Lauer, Craig Engstrom, Stuart Crozier
2011	Misc	`conf`	Automated MR Hip Bone Segmentation. DICTA Ying Xia, Shakes Chandra, Olivier Salvado, Jurgen Fripp, Raphael Schwarz, Lars Lauer, Craig Engstrom, Stuart Crozier
2011	Misc	`conf`	Automatic Segmentation of the Prostate in 3D Magnetic Resonance Images Using Case Specific Deformable Models. DICTA Shekhar Chandra, Jason Dowling, Kai-Kai Shen, Josien P. W. Pluim, Peter B. Greer, Olivier Salvado, Jurgen Fripp
2011	B	`conf`	Detecting hippocampal shape changes in Alzheimer's disease using statistical shape models. Image Processing Kai-Kai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Mériaudeau, Olivier Salvado
2011	—	`conf`	Fast Automatic Multi-atlas Segmentation of the Prostate from 3D MR Images. Prostate Cancer Imaging Jason Dowling, Jurgen Fripp, Shekhar Chandra, Josien P. W. Pluim, Jonathan Lambert, Joel Parker, James Denham, Peter B. Greer, Olivier Salvado
2011	—	`conf`	Local intensity model: An outlier detection framework with applications to white matter hyperintensity segmentation. ISBI Parnesh Raniga, Pierre Schmitt, Pierrick Bourgeat, Jurgen Fripp, Victor Villemagne, Christopher Rowe, Olivier Salvado
2011	Misc	`conf`	Surface-Base Approach Using a Multi-scale EM-ICP Registration for Statistical Population Analysis. DICTA Vincent Doré, Jurgen Fripp, Pierrick Bourgeat, Kai-Kai Shen, Olivier Salvado, Oscar Acosta
2011	J	`jnl`	Symmetric diffeomorphic registration of fibre orientation distributions. NeuroImage David Raffelt, Jacques-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, Olivier Salvado
2010	—	`conf`	3D shape context surface registration for cortical mapping. ISBI Oscar Acosta, Jurgen Fripp, Andrea Rueda, Di Xiao, Erik Bonner, Pierrick Bourgeat, Olivier Salvado
2010	—	`conf`	Automatic MRI Atlas-Based External Beam Radiation Therapy Treatment Planning for Prostate Cancer. Prostate Cancer Imaging Jason Dowling, Jonathan Lambert, Joel Parker, Peter B. Greer, Jurgen Fripp, James Denham, Sébastien Ourselin, Olivier Salvado
2010	J	`jnl`	Automatic Segmentation and Quantitative Analysis of the Articular Cartilages From Magnetic Resonance Images of the Knee. IEEE Trans. Medical Imaging Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin
2010	—	`conf`	Increasing Power to Predict Mild Cognitive Impairment Conversion to Alzheimer's Disease Using Hippocampal Atrophy Rate and Statistical Shape Models. MICCAI (2) Kelvin K. Leung, Kai-Kai Shen, Josephine Barnes, Gerard R. Ridgway, Matthew J. Clarkson, Jurgen Fripp, Olivier Salvado, Fabrice Mériaudeau, Nick C. Fox, Pierrick Bourgeat
2010	—	`conf`	MILXView: A Medical Imaging, Analysis and Visualization Platform. E-HEALTH Neil Burdett, Jurgen Fripp, Pierrick Bourgeat, Olivier Salvado
2010	—	`conf`	Supervised method to build an atlas database for multi-atlas segmentation-propagation. Computer-Aided Diagnosis Kai-Kai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Mériaudeau, David Ames, Kathryn A. Ellis, Colin L. Masters, Victor L. Villemagne, Christopher C. Rowe, Olivier Salvado
2009	—	`conf`	A Quantitative Comparison of Three Methods for Inflating Cortical Meshes. ISBI Erik Bonner, Oscar Acosta, Jurgen Fripp, Olivier Salvado
2009	—	`conf`	Automated Segmentation of the Menisci from MR Images. ISBI Jurgen Fripp, Pierrick Bourgeat, Craig Engstrom, Sébastien Ourselin, Stuart Crozier, Olivier Salvado
2009	J	`jnl`	Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps. Medical Image Anal. Oscar Acosta, Pierrick Bourgeat, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, Sébastien Ourselin
2009	B	`conf`	Non-rigid registration of small animal skeletons from micro-CT using 3D shape context. Image Processing Di Xiao, Pierrick Bourgeat, Jurgen Fripp, Oscar Acosta Tamayo, Marie Claude Grégoire, Olivier Salvado
2009	B	`conf`	Nonrigid correction of interleaving artefacts in pelvic MRI. Image Processing Jason Dowling, Pierrick Bourgeat, David Raffelt, Jurgen Fripp, Peter B. Greer, Jacqueline Patterson, James Denham, Sanjiv Gupta, Colin Tang, Peter Stanwell, Sébastien Ourselin, Olivier Salvado
2009	—	`conf`	Partial Volume Estimation of Brain Cortex from MRI Using Topology-Corrected Segmentation. ISBI Andrea Rueda, Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp, Erik Bonner, Nicholas D. H. Dowson, Michel Couprie, Eduardo Romero, Olivier Salvado
2008	J	`jnl`	Appearance modeling of NeuroImage Jurgen Fripp, Pierrick Bourgeat, Oscar Acosta, Parnesh Raniga, Marc Modat, Kerryn E. Pike, Gareth Jones, Graeme O'Keefe, Colin L. Masters, David Ames, Kathryn A. Ellis, Paul Maruff, Jon Currie, Victor Villemagne, Christopher Rowe, Olivier Salvado, Sébastien Ourselin
2008	—	`conf`	Atlas based automated segmentation of the quadratus lumborum muscle using non-rigid registration on magnetic resonance images of the thoracolumbar region. ISBI Valer Jurcak, Jurgen Fripp, Craig Engstrom, Duncan Walker, Olivier Salvado, Sébastien Ourselin, Stuart Crozier
2008	—	`conf`	Automatic Delineation of Sulci and Improved Partial Volume Classification for Accurate 3D Voxel-Based Cortical Thickness Estimation from MR. MICCAI (1) Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp, Erik Bonner, Sébastien Ourselin, Olivier Salvado
2008	—	`—`	Automatic segmentation and analysis of Magnetic Resonance images of the knee bones and cartilages Jurgen Fripp
2008	—	`conf`	Estimation of shape model parameters for 3D surfaces. ISBI Søren G. H. Erbou, Sune Darkner, Jurgen Fripp, Sébastien Ourselin, Bjarne K. Ersbøll
2008	—	`conf`	Generative atlases and atlas selection for C11-PIB PET-PET registration of elderly, mild cognitive impaired and Alzheimer disease patients. ISBI Jurgen Fripp, Pierrick Bourgeat, Oscar Acosta, Gareth Jones, Victor Villemagne, Sébastien Ourselin, Christopher Rowe, Olivier Salvado
2008	—	`conf`	Improved cortical thickness measurement from MR images using partial volume estimation. ISBI Pierrick Bourgeat, Oscar Acosta, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, Sébastien Ourselin
2008	—	`conf`	MR-Less High Dimensional Spatial Normalization of 11C PiB PET Images on a Population of Elderly, Mild Cognitive Impaired and Alzheimer Disease Patients. MICCAI (1) Jurgen Fripp, Pierrick Bourgeat, Parnesh Raniga, Oscar Acosta, Victor Villemagne, Gareth Jones, Graeme O'Keefe, Christopher Rowe, Sébastien Ourselin, Olivier Salvado
2007	—	`conf`	Automatic Segmentation of Articular Cartilage in Magnetic Resonance Images of the Knee. MICCAI (2) Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin
2007	—	`conf`	Automatic Segmentation of the Bones from Mr Images of The Knee. ISBI Jurgen Fripp, Sébastien Ourselin, Simon K. Warfield, Stuart Crozier
2007	J	`jnl`	MR image segmentation of the knee bone using phase information. Medical Image Anal. Pierrick Bourgeat, Jurgen Fripp, Peter Stanwell, Saadallah Ramadan, Sébastien Ourselin
2007	B	`conf`	Shape based segmentation of MRIs of the bones in the knee using phase and intensity information. Image Processing Jurgen Fripp, Pierrick Bourgeat, Stuart Crozier, Sébastien Ourselin
2006	—	`conf`	A subdivision-based parametric deformable model for surface extraction and statistical shape modeling of the knee cartilages. Image-Guided Procedures Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin
2006	—	`conf`	Automatic Segmentation of the Knee Bones using 3D Active Shape Models. ICPR (1) Jurgen Fripp, Simon K. Warfield, Stuart Crozier, Sébastien Ourselin
2006	—	`conf`	MR Image Segmentation Using Phase Information and a Novel Multiscale Scheme. MICCAI (2) Pierrick Bourgeat, Jurgen Fripp, Peter Stanwell, Saadallah Ramadan, Sébastien Ourselin
2005	—	`conf`	3D Statistical Shape Models to Embed Spatial Relationship Information. CVBIA Jurgen Fripp, Pierrick Bourgeat, Andrea J. U. Mewes, Simon K. Warfield, Stuart Crozier, Sébastien Ourselin
2005	Misc	`conf`	Automatic Initialization of 3D Deformable Models for Cartilage Segmentation. DICTA Jurgen Fripp, Stuart Crozier, Simon K. Warfield, Sébastien Ourselin
2005	—	`conf`	The Use of Unwrapped Phase in MR Image Segmentation: A Preliminary Study. MICCAI (2) Pierrick Bourgeat, Jurgen Fripp, Andrew L. Janke, Graham J. Galloway, Stuart Crozier, Sébastien Ourselin