Junhyong Kim

26 papers A* 2B 3C 4Misc 1Journal 13Unranked 3
YearRankTypeTitle / Venue / Authors
2025 A* conf
Reconstructing Cell Lineage Trees from Phenotypic Features with Metric Learning.
ICML
Da Kuang, Guanwen Qiu, Junhyong Kim
2025 J jnl
Reconstructing Cell Lineage Trees from Phenotypic Features with Metric Learning.
CoRR
Da Kuang, Guanwen Qiu, Junhyong Kim
2021 C conf
A subspace clustering method for satisfying stoimetric constraints in scRNA -seq.
BIBE
Angela Huang, Junhyong Kim
2020 C conf
Resistant Fit Regression Normalization for Single-cell RNA-seq Data.
BIBE
Da Kuang, Junhyong Kim
2018 — conf
Discovering Similar Workflows via Provenance Clustering: A Case Study.
IPAW
Abdussalam Alawini, Leshang Chen, Susan B. Davidson, Stephen Fisher, Junhyong Kim
2018 J jnl
PIVOT: platform for interactive analysis and visualization of transcriptomics data.
BMC Bioinform.
Qin Zhu, Stephen A. Fisher, Hannah Dueck, Sarah Middleton, Mugdha Khaladkar, Junhyong Kim
2015 J jnl
PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences.
J. Comput. Biol.
Siavash Mirarab, Nam Nguyen, Sheng Guo, Li-San Wang, Junhyong Kim, Tandy J. Warnow
2008 J jnl
Self Containment, a Property of Modular RNA Structures, Distinguishes microRNAs.
PLoS Comput. Biol.
Miler T. Lee, Junhyong Kim
2007 J jnl
Efficient Enumeration of Phylogenetically Informative Substrings.
J. Comput. Biol.
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim
2007 — conf
Phyl-O'Data (POD) from Tree of Life: Integration Challenges from Yellow Slimy Things to Black Crunchy Stuff.
DILS
Junhyong Kim
2006 A* conf
Crimson: A Data Management System to Support Evaluating Phylogenetic Tree Reconstruction Algorithms.
VLDB
Yifeng Zheng, Stephen Fisher, Shirley Cohen, Sheng Guo, Junhyong Kim, Susan B. Davidson
2006 B conf
Efficient Enumeration of Phylogenetically Informative Substrings.
RECOMB
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim
2006 — conf
Transcriptional Target Prediction Using Qualitative Reasoning.
EMBC
Li-San Wang, Doris Wagner, Chang Seob Kwon, Yanhui Su, Junhyong Kim
2005 B conf
Efficiently Supporting Structure Queries on Phylogenetic Trees.
SSDBM
Susan B. Davidson, Junhyong Kim, Yifeng Zheng
2005 J jnl
Guest Editorial: WABI Special Section Part II.
IEEE ACM Trans. Comput. Biol. Bioinform.
Junhyong Kim, Inge Jonassen
2004 C ed.
Algorithms in Bioinformatics, 4th International Workshop, WABI 2004, Bergen, Norway, September 17-21, 2004, Proceedings
WABI
Inge Jonassen, Junhyong Kim
2004 C conf
Genome Identification and Classification by Short Oligo Arrays.
WABI
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim, Li-San Wang
2004 J jnl
Guest Editorial: WABI Special Section Part 1.
IEEE ACM Trans. Comput. Biol. Bioinform.
Junhyong Kim, Inge Jonassen
2003 J jnl
Reconstructing the Temporal Ordering of Biological Samples Using Microarray Data.
Bioinform.
Paul M. Magwene, Paul Lizardi, Junhyong Kim
2002 J jnl
A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model.
J. Comput. Biol.
James Aspnes, Julia Hartling, Ming-Yang Kao, Junhyong Kim, Gauri Shah
2002 J jnl
Computers Are from Mars, Organisms Are from Venus.
Computer
Junhyong Kim
2002 J jnl
Geometry of gene expression dynamics.
Bioinform.
S. A. Rifkin, Junhyong Kim
2001 B conf
A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model.
ISAAC
James Aspnes, Julia Hartling, Ming-Yang Kao, Junhyong Kim, Gauri Shah
2001 Misc conf
A Tree Obscured By Vines: Horizontal Gene Transfer and the Median Tree Method of Estimating Species Phylogeny.
Pacific Symposium on Biocomputing
Junhyong Kim, Benjamin A. Salisbury
2001 J jnl
Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model
CoRR
James Aspnes, Julia Hartling, Ming-Yang Kao, Junhyong Kim, Gauri Shah
2000 J jnl
Identification of novel multi-transmembrane proteins from genomic databases using quasi-periodic structural properties.
Bioinform.
Junhyong Kim, Etsuko N. Moriyama, Coral G. Warr, Peter J. Clyne, John R. Carlson