Jungwei Fan

38 papers B 1Misc 10Journal 14Unranked 13
YearRankTypeTitle / Venue / Authors
2024 J jnl
FedFSA: Hybrid and federated framework for functional status ascertainment across institutions.
J. Biomed. Informatics
Sunyang Fu, Heling Jia, Maria Vassilaki, Vipina Kuttichi Keloth, Yifang Dang, Yujia Zhou, Muskan Garg, Ronald C. Petersen, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Andrew Wen, Fang Li, Hua Xu, Cui Tao, Jungwei Fan, Hongfang Liu, Sunghwan Sohn
2023 — conf
Classification of Patient Portal Messages with BERT-based Language Models.
ICHI
Yang Ren, Dezhi Wu, Aditya Khurana, George M. Mastorakos, Sunyang Fu, Nansu Zong, Jungwei Fan, Hongfang Liu, Ming Huang
2023 J jnl
Retrospective content analysis of consumer product reviews related to chronic pain.
Frontiers Digit. Health
Jungwei Fan, Wanjing Wang, Ming Huang, Hongfang Liu, W. M. Hooten
2022 — conf
Effects of Information Masking in the Task-Specific Finetuning of a Transformers-Based Clinical Question-Answering Framework.
ICHI
Sungrim Moon, Huan He, Jungwei Fan
2022 — conf
Mining Transportation Issues from Patient Portal Messages.
ICHI
Nan Wang, Ming Huang, Jungwei Fan
2022 Misc conf
Quality Assessment of Functional Status Documentation in EHR Across Institutions.
AMIA
Sunyang Fu, Maria Vassilaki, Omar A. Ibrahim, Ronald C. Petersen, Jennifer St. Sauver, Liwei Wang, Jungwei Fan, Hongfang Liu, Sunghwan Sohn
2022 J jnl
Quality assessment of functional status documentation in EHRs across different healthcare institutions.
Frontiers Digit. Health
Sunyang Fu, Maria Vassilaki, Omar A. Ibrahim, Ronald C. Petersen, Sandeep R. Pagali, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Jungwei Fan, Hongfang Liu, Sunghwan Sohn
2022 J jnl
RxWhyQA: a clinical question-answering dataset with the challenge of multi-answer questions.
CoRR
Sungrim Moon, Huan He, Hongfang Liu, Jungwei Fan
2021 Misc conf
A Scoping Review of Informatics Research for Clinical Practice Variation.
AMIA
Sunghwan Sohn, Sungrim Moon, Larry J. Prokop, Victor M. Montori, Jungwei Fan
2021 J jnl
An aberration detection-based approach for sentinel syndromic surveillance of COVID-19 and other novel influenza-like illnesses.
J. Biomed. Informatics
Andrew Wen, Liwei Wang, Huan He, Sijia Liu, Sunyang Fu, Sunghwan Sohn, Jacob A. Kugel, Vinod C. Kaggal, Ming Huang, Yanshan Wang, Feichen Shen, Jungwei Fan, Hongfang Liu
2021 Misc conf
Development of a Clinical Question-Answering Corpus with Realistic Multi-Answer Challenges.
AMIA
Sungrim Moon, Huan He, Jungwei Fan
2021 Misc conf
Disparity analysis of patient portal messaging use for COVID-19 in urban versus rural locality.
AMIA
Ming Huang, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Nansu Zong, Yue Yu, Julie E. Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Chyke Doubeni, Jungwei Fan, Hongfang Liu, Christi A. Patten
2021 — conf
Identification of Transportation Barriers in Patient Portal Messages via Deep Semantic Embeddings and Clustering.
MedInfo
Ming Huang, Aditya Khurana, George M. Mastorakos, Jungwei Fan
2021 Misc conf
Patient Asynchronous Response to Coronavirus Disease 2019 (COVID-19): A Retrospective Analysis of Patient Portal Messages.
AMIA
Ming Huang, Aditya Khurana, George M. Mastorakos, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Julie E. Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Christi A. Patten, Jungwei Fan, Hongfang Liu
2021 — conf
The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.
MedInfo
Sunyang Fu, Andrew Wen, Sandeep R. Pagali, Nansu Zong, Jennifer St Sauver, Sunghwan Sohn, Jungwei Fan, Hongfang Liu
2020 B conf
A Deep Profiling and Visualization Framework to Audit Clinical Assessment Variation.
CBMS
Andrew Wen, Feichen Shen, Sungrim Moon, Hongfang Liu, Jungwei Fan
2020 Misc conf
A Perturbation Approach to Assessing BERT Robustness for Different Linguistic Aspects in Medical Question-Answering.
AMIA
Mohamed Y. Elwazir, Andrew Wen, Sungrim Moon, Jungwei Fan
2020 J jnl
A review of auditing techniques for the Unified Medical Language System.
J. Am. Medical Informatics Assoc.
Ling Zheng, Zhe He, Duo Helen Wei, Vipina Kuttichi Keloth, Jungwei Fan, Luke Lindemann, Xinxin Zhu, James J. Cimino, Yehoshua Perl
2020 Misc conf
Annotating Chronic Pain Episodes in EHR Text: Guideline Development and Corpus Analysis.
AMIA
Luke A. Carlson, Molly M. Jeffery, Sunyang Fu, Huan He, Rozalina G. McCoy, Yanshan Wang, W. M. Hooten, Jennifer L. St. Sauver, Hongfang Liu, Jungwei Fan
2020 Misc conf
Big Impact from Small Data: Unsupervised Machine Learning Approaches for Chronic Pain Patient Subgrouping.
AMIA
Luke A. Carlson, Jennifer St. Sauver, Sunyang Fu, Ahmad P. Tafti, Jungwei Fan, Molly M. Jeffery, Rozalina G. McCoy, Hongfang Liu, Yanshan Wang
2020 Misc conf
Deep Semantic Embeddings and Clustering to Facilitate Identification of Transportation Barriers in Patient Portal Messages.
AMIA
Ming Huang, Jungwei Fan
2020 — conf
How You Ask Matters: The Effect of Paraphrastic Questions to BERT Performance on a Clinical SQuAD Dataset.
ClinicalNLP@EMNLP
Sungrim Moon, Jungwei Fan
2019 J jnl
Adapting and evaluating a deep learning language model for clinical why-question answering.
CoRR
Andrew Wen, Mohamed Y. Elwazir, Sungrim Moon, Jungwei Fan
2019 J jnl
Desiderata for delivering NLP to accelerate healthcare AI advancement and a Mayo Clinic NLP-as-a-service implementation.
npj Digit. Medicine
Andrew Wen, Sunyang Fu, Sungrim Moon, Mohamed El Wazir, Andrew Rosenbaum, Vinod C. Kaggal, Sijia Liu, Sunghwan Sohn, Hongfang Liu, Jungwei Fan
2019 — conf
Enhancing Clinical Information Retrieval through Context-Aware Queries and Indices.
IEEE BigData
Andrew Wen, Yanshan Wang, Vinod C. Kaggal, Sijia Liu, Hongfang Liu, Jungwei Fan
2015 — conf
Finding Difficult-to-Disambiguate Words: Towards an Efficient Workflow to Implement Word Sense Disambiguation.
ICHI
Manabu Torii, Jungwei Fan, Daniel S. Zisook
2015 J jnl
Parsing clinical text: how good are the state-of-the-art parsers?
BMC Medical Informatics Decis. Mak.
Min Jiang, Yang Huang, Jungwei Fan, Buzhou Tang, Joshua C. Denny, Hua Xu
2015 J jnl
Risk factor detection for heart disease by applying text analytics in electronic medical records.
J. Biomed. Informatics
Manabu Torii, Jungwei Fan, Weili Yang, Theodore Lee, Matthew T. Wiley, Daniel S. Zisook, Yang Huang
2014 Misc conf
Building a Treebank of hospital discharge summaries.
AMIA
Yang Huang, Jungwei Fan, Elly W. Yang, Hua Xu
2014 — conf
Parsing Clinical Text: How Good are the State-of-the-Art Parsers?
DTMBIO@CIKM
Min Jiang, Yang Huang, Jungwei Fan, Buzhou Tang, Joshua C. Denny, Hua Xu
2013 — conf
Disorder Concept Identification from Clinical Notes: an Experience with the ShARe/CLEF 2013 Challenge.
CLEF (Working Notes)
Jungwei Fan, Navdeep Sood, Yang Huang
2013 J jnl
Research and applications: Syntactic parsing of clinical text: guideline and corpus development with handling ill-formed sentences.
J. Am. Medical Informatics Assoc.
Jungwei Fan, Elly W. Yang, Min Jiang, Rashmi Prasad, Richard M. Loomis, Daniel Zisook, Joshua C. Denny, Hua Xu, Yang Huang
2011 — conf
An initial study of full parsing of clinical text using the Stanford Parser.
BIBM Workshops
Hua Xu, Samir AbdelRahman, Min Jiang, Jungwei Fan, Yang Huang
2009 J jnl
A review of auditing methods applied to the content of controlled biomedical terminologies.
J. Biomed. Informatics
Xinxin Zhu, Jungwei Fan, David M. Baorto, Chunhua Weng, James J. Cimino
2007 — conf
Combining multiple evidence for gene symbol disambiguation.
BioNLP@ACL
Hua Xu, Jungwei Fan, Carol Friedman
2007 J jnl
Gene symbol disambiguation using knowledge-based profiles.
Bioinform.
Hua Xu, Jungwei Fan, George Hripcsak, Eneida A. Mendonça, Marianthi Markatou, Carol Friedman
2007 — conf
Using Distributional Analysis to Semantically Classify UMLS Concepts.
MedInfo
Jungwei Fan, Hua Xu, Carol Friedman
2007 J jnl
Using contextual and lexical features to restructure and validate the classification of biomedical concepts.
BMC Bioinform.
Jungwei Fan, Hua Xu, Carol Friedman