Julie A. Dickerson

46 papers A* 1B 2C 1Misc 2Journal 26Unranked 13
YearRankTypeTitle / Venue / Authors
2024 — conf
Reducing the Computational Complexity of the Volterra Series Using Permutation/Product Maps.
CCECE
Aaron J. Fonseca, Andrew K. Bolstad, Julie A. Dickerson
2017 — conf
Differential alternative splicing patterns with differential expression to computationally extract plant molecular pathways.
BIBM
Gaurav Kandoi, Julie A. Dickerson
2017 J jnl
Strawberry: Fast and accurate genome-guided transcript reconstruction and quantification from RNA-Seq.
PLoS Comput. Biol.
Ruolin Liu, Julie A. Dickerson
2016 J jnl
The quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize.
BMC Syst. Biol.
Jesse R. Walsh, Mary L. Schaeffer, Peifen Zhang, Seung Yon Rhee, Julie A. Dickerson, Taner Z. Sen
2014 J jnl
A computational platform to maintain and migrate manual functional annotations for BioCyc databases.
BMC Syst. Biol.
Jesse R. Walsh, Taner Z. Sen, Julie A. Dickerson
2014 J jnl
A novel class dependent feature selection method for cancer biomarker discovery.
Comput. Biol. Medicine
Wengang Zhou, Julie A. Dickerson
2014 J jnl
Comparisons of computational methods for differential alternative splicing detection using RNA-seq in plant systems.
BMC Bioinform.
Ruolin Liu, Ann E. Loraine, Julie A. Dickerson
2014 J jnl
Fuzzy Navigation Engine: Mitigating the Cognitive Demands of Semi-Natural Locomotion.
Presence Teleoperators Virtual Environ.
William Eric Marsh, Jonathan W. Kelly, Julie A. Dickerson, James H. Oliver
2013 — conf
Computational methods for alternative splicing detection using RNA-seq.
BCB
Ruolin Liu, Julie A. Dickerson
2013 — conf
Incorporating Gene Annotations as Node Metadata to Improve Network Centrality Measures for Better Node Ranking.
BCB
Divya Mistry, Julie A. Dickerson
2013 — conf
Semi-automated Constraint-based Metabolic Model Generation.
BCB
Jesse R. Walsh, Julie A. Dickerson
2012 J jnl
Discriminating response groups in metabolic and regulatory pathway networks.
Bioinform.
John L. Van Hemert, Julie A. Dickerson
2012 J jnl
Network motif comparison rationalizes Sec1/Munc18-SNARE regulation mechanism in exocytosis.
BMC Syst. Biol.
Tian Xia, Jiansong Tong, Shailendra S. Rathore, Xun Gu, Julie A. Dickerson
2012 J jnl
PLEXdb: gene expression resources for plants and plant pathogens.
Nucleic Acids Res.
Sudhansu Dash, John L. Van Hemert, Lu Hong, Roger P. Wise, Julie A. Dickerson
2012 J jnl
Plantmetabolomics.org: mass spectrometry-based
Nucleic Acids Res.
Preeti Bais, Stephanie M. Moon-Quanbeck, Basil J. Nikolau, Julie A. Dickerson
2012 J jnl
StruLocPred: structure-based protein subcellular localisation prediction using multi-class support vector machine.
Int. J. Data Min. Bioinform.
Wengang Zhou, Julie A. Dickerson
2011 J jnl
CytoModeler: a tool for bridging large-scale network analysis and dynamic quantitative modeling.
Bioinform.
Tian Xia, John L. Van Hemert, Julie A. Dickerson
2011 J jnl
Monte Carlo randomization tests for large-scale abundance datasets on the GPU.
Comput. Methods Programs Biomed.
John L. Van Hemert, Julie A. Dickerson
2011 J jnl
Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities.
BMC Bioinform.
Yao Fu, Laura R. Jarboe, Julie A. Dickerson
2010 — conf
Biological pathway data integration trends, techniques, issues and challenges: A survey.
NaBIC
Shubhalaxmi Kher, Julie A. Dickerson, Neelam Rawat
2010 — conf
Gene Regulatory Network Reconstruction Based on Gene Expression and Transcription Factor Activities.
BIOCOMP
Yao Fu, Laura R. Jarboe, Julie A. Dickerson
2010 J jnl
MetNetGE: interactive views of biological networks and ontologies.
BMC Bioinform.
Ming Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin Wurtele, Julie A. Dickerson
2010 J jnl
OmicsAnalyzer: a Cytoscape plug-in suite for modeling omics data.
Bioinform.
Tian Xia, John L. Van Hemert, Julie A. Dickerson
2010 J jnl
PathwayAccess: CellDesigner plugins for pathway databases.
Bioinform.
John L. Van Hemert, Julie A. Dickerson
2010 — conf
Visualizing Multivariate Hierarchic Data Using Enhanced Radial Space-Filling Layout.
ISVC (1)
Ming Jia, Ling Li, Erin Boggess, Eve Syrkin Wurtele, Julie A. Dickerson
2009 — conf
Reaction Centric Layout for Metabolic Networks.
ISVC (2)
Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele
2009 — conf
Visualization of Gene Regulatory Networks.
ISVC (2)
Muhieddine El Kaissi, Ming Jia, Dirk Reiners, Julie A. Dickerson, Eve Syrkin Wurtele
2008 J jnl
OmicsViz: Cytoscape plug-in for visualizing omics data across species.
Bioinform.
Tian Xia, Julie A. Dickerson
2007 C conf
Modeling protein interaction network and mechanisms in exocytosis.
BIBE
Wen Zhou, Tian Xia, Jiansong Tong, Julie A. Dickerson, Bo Su, Xun Gu
2007 A* conf
Web Site Recommendation Using HTTP Traffic.
ICDM
Ming Jia, Shaozhi Ye, Xing Li, Julie A. Dickerson
2006 Misc conf
A testbed for evaluation and analysis of stepping stone attack attribution techniques.
TRIDENTCOM
Jianqiang Xin, Linfeng Zhang, Brad Aswegan, John Dickerson, Julie A. Dickerson, Thomas E. Daniels, Yong Guan
2006 — conf
Hierarchical visualization of metabolic networks using virtual reality.
VRCIA
Yuting Yang, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson
2005 J jnl
BarleyBase - an expression profiling database for plant genomics.
Nucleic Acids Res.
Lishuang Shen, Jian Gong, Rico A. Caldo, Dan Nettleton, Dianne Cook, Roger P. Wise, Julie A. Dickerson
2005 J jnl
BarleyExpress: a web-based submission tool for enriched microarray database annotations.
Bioinform.
Xiaoyun Tang, Lishuang Shen, Julie A. Dickerson
2005 J jnl
Integration of metabolic networks and gene expression in virtual reality.
Bioinform.
Yuting Yang, Levent Engin, Eve Syrkin Wurtele, Carolina Cruz-Neira, Julie A. Dickerson
2005 J jnl
Modeling gene expression networks using fuzzy logic.
IEEE Trans. Syst. Man Cybern. Part B
Pan Du, Jian Gong, Eve Syrkin Wurtele, Julie A. Dickerson
2005 J jnl
Using the biological taxonomy to access biological literature with PathBinderH.
Bioinform.
Jing Ding, Karthikeyan Viswanathan, Daniel Berleant, Laron M. Hughes, Eve Syrkin Wurtele, Daniel A. Ashlock, Julie A. Dickerson, Andy W. Fulmer, Patrick S. Schnable
2004 Misc conf
Developing an Integrated Wireless System for Fully Immersive Virtual Reality Environments.
ISWC
Galen Faidley, Jayme Hero, Kukjin Lee, Bernard Lwakabamba, Robert D. Walstrom, Feng Chen, Julie A. Dickerson, Diane T. Rover, Robert J. Weber, Carolina Cruz-Neira
2003 — ch.
Creating Metabolic Network Models using Text Mining and Expert Knowledge.
Computational Biology and Genome Informatics
Julie A. Dickerson, Daniel Berleant, Z. Cox, W. Qi, Eve Syrkin Wurtele
2003 B conf
Fuzzy feature extraction and visualization for intrusion detection.
FUZZ-IEEE
Jianqiang Xin, John E. Dickerson, Julie A. Dickerson
1999 B conf
A comparison of radial basis function networks and fuzzy neural logic networks for autonomous star recognition.
IJCNN
Julie A. Dickerson, J. Hong, Z. Cox, D. Bailey
1996 J jnl
Fuzzy function approximation with ellipsoidal rules.
IEEE Trans. Syst. Man Cybern. Part B
Julie A. Dickerson, Bart Kosko
1996 J jnl
Fuzzy throttle and brake control for platoons of smart cars.
Fuzzy Sets Syst.
Hyun Mun Kim, Julie A. Dickerson, Bart Kosko
1994 J jnl
Virtual Worlds as Fuzzy Cognitive Maps.
Presence Teleoperators Virtual Environ.
Julie A. Dickerson, Bart Kosko
1993 — conf
Fuzzy function learning with covariance ellipsoids.
ICNN
Julie A. Dickerson, Bart Kosko
1993 — conf
Virtual Worlds as Fuzzy Cognitive Maps.
VRAIS
Julie A. Dickerson, Bart Kosko