Juliana S. Bernardes

12 papers B 1Journal 10
YearRankTypeTitle / Venue / Authors
2023 B conf
Multi-Objective Wrapper Differential Evolution with Guided Initial Population for Feature Selection.
CEC
Gabriel Dominico, Juliana S. Bernardes, Leonardo Da Luz Dorneles, Márcio Dorn
2023 J jnl
Reconstructing B cell lineage trees with minimum spanning tree and genotype abundances.
BMC Bioinform.
Nika Abdollahi, Lucile Jeusset, Anne Langlois De Septenville, Frédéric Davi, Juliana S. Bernardes
2022 J jnl
A multi-objective based clustering for inferring BCR clonal lineages from high-throughput B cell repertoire data.
PLoS Comput. Biol.
Nika Abdollahi, Lucile Jeusset, Anne Langlois De Septenville, Hugues Ripoche, Frédéric Davi, Juliana S. Bernardes
2018 J jnl
Meet-U: Educating through research immersion.
PLoS Comput. Biol.
Nika Abdollahi, Alexandre Albani, Éric Anthony, Agnes Baud, Mélissa Cardon, Robert Clerc, Dariusz Czernecki, Romain Conte, Laurent David, Agathe Delaune, Samia Djerroud, Pauline Fourgoux, Nadège Guiglielmoni, Jeanne Laurentie, Nathalie Lehmann, Camille Lochard, Rémi Montagne, Vasiliki Myrodia, Vaitea Opuu, Elise Parey, Lélia Polit, Sylvain Privé, Chloé Quignot, Maria Ruiz-Cuevas, Mariam Sissoko, Nicolas Sompairac, Audrey Vallerix, Violaine Verrecchia, Marc Delarue, Raphaël Guérois, Yann Ponty, Sophie Sacquin-Mora, Alessandra Carbone, Christine Froidevaux, Stéphane Le Crom, Olivier Lespinet, Martin Weigt, Samer Abboud, Juliana S. Bernardes, Guillaume Bouvier, Chloé Dequeker, Arnaud Ferré, Patrick Fuchs, Gaëlle Lelandais, Pierre Poulain, Hugues Richard, Hugo Schweke, Elodie Laine, Anne Lopes
2016 J jnl
A multi-objective optimization approach accurately resolves protein domain architectures.
Bioinform.
Juliana S. Bernardes, Fabio R. J. Vieira, Gerson Zaverucha, Alessandra Carbone
2016 J jnl
Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence.
PLoS Comput. Biol.
Juliana S. Bernardes, Gerson Zaverucha, Catherine Vaquero, Alessandra Carbone
2015 J jnl
Evaluation and improvements of clustering algorithms for detecting remote homologous protein families.
BMC Bioinform.
Juliana S. Bernardes, Fabio R. J. Vieira, Lygia Costa, Gerson Zaverucha
2012 — —
Combining evolution and machine learning for functional annotation and classification of remote homologous proteins. (Evolution et apprentissage automatique pour l'annotation fonctionnelle et la classification des homologies lointains en protéines).
Juliana S. Bernardes
2011 J jnl
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models.
BMC Bioinform.
Juliana S. Bernardes, Alessandra Carbone, Gerson Zaverucha
2008 J jnl
Structural descriptor database: a new tool for sequence-based functional site prediction.
BMC Bioinform.
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tereza Ribeiro de Vasconcelos
2007 J jnl
A study of structural properties on profiles HMMs
CoRR
Juliana S. Bernardes, Alberto M. R. Dávila, Vítor Santos Costa, Gerson Zaverucha
2007 J jnl
Improving model construction of profile HMMs for remote homology detection through structural alignment.
BMC Bioinform.
Juliana S. Bernardes, Alberto M. R. Dávila, Vítor Santos Costa, Gerson Zaverucha