José C. M. Mombach

12 papers Journal 7Unranked 5
YearRankTypeTitle / Venue / Authors
2024 J jnl
A differentiable programming framework for spin models.
Comput. Phys. Commun.
Tiago de Souza Farias, Vitor Vaz Schultz, José C. M. Mombach, Jonas Maziero
2016 J jnl
The R implementation of the CRAN package PATHChange, a tool to study genetic pathway alterations in transcriptomic data.
Comput. Biol. Medicine
Carla A. R. S. Fontoura, Gastone C. Castellani, José C. M. Mombach
2009 J jnl
ViaComplex: software for landscape analysis of gene expression networks in genomic context.
Bioinform.
Mauro A. A. Castro, José L. Rybarczyk Filho, Rodrigo J. S. Dalmolin, Marialva Sinigaglia, José Cláudio Fonseca Moreira, José C. M. Mombach, Rita M. C. de Almeida
2006 J jnl
Bioinformatics analysis of mycoplasma metabolism: Important enzymes, metabolic similarities, and redundancy.
Comput. Biol. Medicine
José C. M. Mombach, Ney Lemke, Norma M. da Silva, Rejane A. Ferreira, Eduardo Isaia, Cláudia K. Barcellos
2006 J jnl
Computer simulation of the influence of cellular adhesion on the morphology of the interface between tissues of proliferating and quiescent cells.
Comput. Biol. Medicine
Marcos A. Knewitz, José C. M. Mombach
2006 — conf
High Performance Simulations of the Cellular Potts Model.
HPCS
Fernando Piccini Cercato, José C. M. Mombach, Gerson G. H. Cavalheiro
2005 J jnl
An Efficient Parallel Algorithm to Evolve Simulations of the Cellular Potts Model.
Parallel Process. Lett.
Éder Gusatto, José C. M. Mombach, Fernando Piccini Cercato, Gerson G. H. Cavalheiro
2005 — conf
Modeling and Property Verification of Lactose Operon Regulation.
BSB
Marcelo Cezar Pinto, Luciana Foss, José C. M. Mombach, Leila Ribeiro
2004 — conf
An Integrated Model for Cellular Analysis.
WOB
Eduardo Battistella, José Souza, Cláudia K. Barcellos, Ney Lemke, José C. M. Mombach
2004 J jnl
Essentiality and damage in metabolic networks.
Bioinform.
Ney Lemke, Fabiana Herédia, Cláudia K. Barcellos, Adriana Neves dos Reis, José C. M. Mombach
2003 — conf
A Method to Identify Essential Enzymes in the Metabolism: Application to Escherichia Coli.
CMSB
Ney Lemke, Fabiana Herédia, Cláudia K. Barcellos, José C. M. Mombach
2002 — conf
Analysis of Functional Interactions of Enzymes in Mycoplasma pneumoniae.
WOB
Adriana Neves dos Reis, Cláudia K. Barcellos, Fabiana Herédia, Jean J. Schmith, José C. M. Mombach, Ney Lemke, Rejane A. Ferreira