Joris Vankerschaver

34 papers B 1Journal 22Unranked 11

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Boosting 3D Liver Shape Datasets with Diffusion Models and Implicit Neural Representations. MICCAI (2) Khoa Tuan Nguyen, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Niki Rashidian, Wesley De Neve
2025	J	`jnl`	Boosting 3D Liver Shape Datasets with Diffusion Models and Implicit Neural Representations. CoRR Khoa Tuan Nguyen, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Nikdokht Rashidian, Wesley De Neve
2025	J	`jnl`	Detecting Regional Spurious Correlations in Vision Transformers via Token Discarding. CoRR Solha Kang, Esla Timothy Anzaku, Wesley De Neve, Arnout Van Messem, Joris Vankerschaver, François Rameau, Utku Ozbulak
2025	J	`jnl`	Identifying Critical Tokens for Accurate Predictions in Transformer-based Medical Imaging Models. CoRR Solha Kang, Joris Vankerschaver, Utku Ozbulak
2025	J	`jnl`	Improved Sub-Visible Particle Classification in Flow Imaging Microscopy via Generative AI-Based Image Synthesis. CoRR Utku Ozbulak, Michaela Cohrs, Hristo L. Svilenov, Joris Vankerschaver, Wesley De Neve
2025	J	`jnl`	Less is More? Revisiting the Importance of Frame Rate in Real-Time Zero-Shot Surgical Video Segmentation. CoRR Utku Ozbulak, Seyed Amir Mousavi, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Wesley De Neve, Joris Vankerschaver
2025	J	`jnl`	One Patient's Annotation is Another One's Initialization: Towards Zero-Shot Surgical Video Segmentation with Cross-Patient Initialization. CoRR Seyed Amir Mousavi, Utku Ozbulak, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve
2025	—	`conf`	Revisiting the Evaluation Bias Introduced by Frame Sampling Strategies in Surgical Video Segmentation Using SAM2. FAIMI@MICCAI Utku Ozbulak, Seyed Amir Mousavi, Francesca Tozzi, Niki Rashidian, Wouter Willaert, Wesley De Neve, Joris Vankerschaver
2025	J	`jnl`	Self-supervised Benchmark Lottery on ImageNet: Do Marginal Improvements Translate to Improvements on Similar Datasets? CoRR Utku Ozbulak, Esla Timothy Anzaku, Solha Kang, Wesley De Neve, Joris Vankerschaver
2025	—	`conf`	SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-World Breast MRI Classification. MICCAI (16) Jongbum Won, Wesley De Neve, Joris Vankerschaver, Utku Ozbulak
2025	J	`jnl`	SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-world Breast MRI Classification. CoRR Jong Bum Won, Wesley De Neve, Joris Vankerschaver, Utku Ozbulak
2025	J	`jnl`	Toward Using Machine Learning as a Shape Quality Metric for Liver Point Cloud Generation. CoRR Khoa Tuan Nguyen, Gaeun Oh, Ho-min Park, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Niki Rashidian, Wesley De Neve
2025	—	`conf`	Towards Affordable Tumor Segmentation and Visualization for 3D Breast MRI Using SAM2. Deep-Breath@MICCAI Solha Kang, Eugene Kim, Joris Vankerschaver, Utku Ozbulak
2025	J	`jnl`	Towards Affordable Tumor Segmentation and Visualization for 3D Breast MRI Using SAM2. CoRR Solha Kang, Eugene Kim, Joris Vankerschaver, Utku Ozbulak
2025	—	`conf`	Towards Improved Cervical Cancer Screening: Vision Transformer-Based Classification and Interpretability. ISBI Khoa Tuan Nguyen, Homin Park, Gaeun Oh, Joris Vankerschaver, Wesley De Neve
2025	J	`jnl`	Towards Improved Cervical Cancer Screening: Vision Transformer-Based Classification and Interpretability. CoRR Khoa Tuan Nguyen, Ho-min Park, Gaeun Oh, Joris Vankerschaver, Wesley De Neve
2024	J	`jnl`	Assessing the reliability of point mutation as data augmentation for deep learning with genomic data. BMC Bioinform. Hyun Jung Lee, Utku Ozbulak, Homin Park, Stephen Depuydt, Wesley De Neve, Joris Vankerschaver
2024	—	`conf`	Grasshopper Optimization Algorithm (GOA): A Novel Algorithm or A Variant of PSO? ANTS Negin Harandi, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver
2024	—	`conf`	Identifying Critical Tokens for Accurate Predictions in Transformer-Based Medical Imaging Models. MLMI@MICCAI (2) Solha Kang, Joris Vankerschaver, Utku Ozbulak
2024	B	`conf`	Self-supervised Benchmark Lottery on ImageNet: Do Marginal Improvements Translate to Improvements on Similar Datasets? IJCNN Utku Ozbulak, Esla Timothy Anzaku, Solha Kang, Wesley De Neve, Joris Vankerschaver
2023	J	`jnl`	BRCA Gene Mutations in dbSNP: A Visual Exploration of Genetic Variants. CoRR Woowon Jang, Shiwoo Koak, Jiwon Im, Utku Ozbulak, Joris Vankerschaver
2023	J	`jnl`	CRISPR-Cas-Docker: web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins. BMC Bioinform. Ho-min Park, Jongbum Won, Yunseol Park, Esla Timothy Anzaku, Joris Vankerschaver, Arnout Van Messem, Wesley De Neve, Hyunjin Shim
2023	J	`jnl`	Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. CoRR Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver
2023	J	`jnl`	Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. Trans. Mach. Learn. Res. Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver
2023	J	`jnl`	Mutate and observe: utilizing deep neural networks to investigate the impact of mutations on translation initiation. Bioinform. Utku Ozbulak, Hyun Jung Lee, Jasper Zuallaert, Wesley De Neve, Stephen Depuydt, Joris Vankerschaver
2023	—	`conf`	Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos Using NeRFs. MLMI@MICCAI (1) Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve
2023	J	`jnl`	Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos using NeRFs. CoRR Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve
2022	J	`jnl`	Feedback Integrators for Mechanical Systems with Holonomic Constraints. Sensors Dong Eui Chang, Matthew Perlmutter, Joris Vankerschaver
2022	J	`jnl`	Utilizing Mutations to Evaluate Interpretability of Neural Networks on Genomic Data. CoRR Utku Ozbulak, Solha Kang, Jasper Zuallaert, Stephen Depuydt, Joris Vankerschaver
2022	J	`jnl`	VPsearch: fast exact sequence similarity search for genomic sequences. J. Open Source Softw. Joris Vankerschaver, Steven J. Kern, Robert Kern
2014	J	`jnl`	A Novel Formulation of Point Vortex Dynamics on the Sphere: Geometrical and Numerical Aspects. J. Nonlinear Sci. Joris Vankerschaver, Melvin Leok
2012	—	`conf`	Hamiltonian mechanics and nonlinear dynamics of a body subject to time-varying gyroscopic and potential forces. CDC Scott David Kelly, Joris Vankerschaver
2010	—	`conf`	Stokes-Dirac structures through reduction of infinite-dimensional Dirac structures. CDC Joris Vankerschaver, Hiroaki Yoshimura, Melvin Leok, Jerrold E. Marsden
2009	—	`conf`	Geometric control of particle manipulation in a two-dimensional fluid. CDC Yizhar Or, Joris Vankerschaver, Scott David Kelly, Richard M. Murray, Jerrold E. Marsden