Jonathan S. Mason

14 papers Misc 1Journal 13

Year	Rank	Type	Title / Venue / Authors
2020	J	`jnl`	Accurate Prediction of GPCR Ligand Binding Affinity with Free Energy Perturbation. J. Chem. Inf. Model. Francesca Deflorian, Laura Pérez-Benito, Eelke B. Lenselink, Miles Congreve, Herman W. T. van Vlijmen, Jonathan S. Mason, Chris de Graaf, Gary Tresadern
2019	J	`jnl`	Understanding Ligand Binding Selectivity in a Prototypical GPCR Family. J. Chem. Inf. Model. Giulio Mattedi, Francesca Deflorian, Jonathan S. Mason, Chris de Graaf, Francesco L. Gervasio
2016	J	`jnl`	GPCR-Bench: A Benchmarking Set and Practitioners' Guide for G Protein-Coupled Receptor Docking. J. Chem. Inf. Model. Dahlia R. Weiss, Andrea Bortolato, Benjamin G. Tehan, Jonathan S. Mason
2015	J	`jnl`	Decoding the Role of Water Dynamics in Ligand-Protein Unbinding: CRF J. Chem. Inf. Model. Andrea Bortolato, Francesca Deflorian, Dahlia R. Weiss, Jonathan S. Mason
2013	J	`jnl`	Water Network Perturbation in Ligand Binding: Adenosine A J. Chem. Inf. Model. Andrea Bortolato, Benjamin G. Tehan, Michael S. Bodnarchuk, Jonathan W. Essex, Jonathan S. Mason
2010	J	`jnl`	High-Throughput Virtual Screening of Proteins Using GRID Molecular Interaction Fields. J. Chem. Inf. Model. Simone Sciabola, Robert V. Stanton, James E. J. Mills, Maria M. Flocco, Massimo Baroni, Gabriele Cruciani, Francesca Perruccio, Jonathan S. Mason
2007	J	`jnl`	A Common Reference Framework for Analyzing/Comparing Proteins and Ligands. Fingerprints for Ligands And Proteins (FLAP): Theory and Application. J. Chem. Inf. Model. Massimo Baroni, Gabriele Cruciani, Simone Sciabola, Francesca Perruccio, Jonathan S. Mason
2007	J	`jnl`	Designing Compound Subsets: Comparison of Random and Rational Approaches Using Statistical Simulation. J. Chem. Inf. Model. Siew K. Yeap, Rosalind J. Walley, Michael Snarey, Willem P. van Hoorn, Jonathan S. Mason
2004	J	`jnl`	Descriptors you can count on? Normalized and filtered pharmacophore descriptors for virtual screening. J. Comput. Aided Mol. Des. Andrew C. Good, Sung-Jin Cho, Jonathan S. Mason
1999	Misc	`conf`	Ligand-Receptor 3-D Similarity Studies Using Multiple 4-Point Pharmacophores. Pacific Symposium on Biocomputing Jonathan S. Mason, Daniel L. Cheney
1998	J	`jnl`	Chemistry Space Metrics in Diversity Analysis, Library Design, and Compound Selection. J. Chem. Inf. Comput. Sci. Paul R. Menard, Jonathan S. Mason, Isabelle Morize, Susanne Bauerschmidt
1998	J	`jnl`	Rational Screening Set Design and Compound Selection: Cascaded Clustering. J. Chem. Inf. Comput. Sci. Paul R. Menard, Richard A. Lewis, Jonathan S. Mason
1997	J	`jnl`	Similarity Measures for Rational Set Selection and Analysis of Combinatorial Libraries: The Diverse Property-Derived (DPD) Approach. J. Chem. Inf. Comput. Sci. Richard A. Lewis, Jonathan S. Mason, Iain M. McLay
1996	J	`jnl`	Diversity Profiling and Design Using 3D Pharmacophores: Pharmacophore-Derived Queries (PDQ). J. Chem. Inf. Comput. Sci. Stephen D. Pickett, Jonathan S. Mason, Iain M. McLay